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The SG-77 is a high-performance laboratory equipment designed for various applications. It features precise temperature control and advanced monitoring capabilities to ensure consistent and reliable results. The core function of the SG-77 is to provide a controlled environment for scientific experimentation and analysis.

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4 protocols using sg 77

1

TCA-based Bim1-HA protein extraction

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TCA-precipitated protein extracts were used to analyze Bim1-HA expression in wild type Bim1-HA or Bim1-HA mutants. For all figures, except Supplementary Figure 4c, overnight cultures of C. neoformans cells were diluted to an OD600 of 0.3 in 5 ml of fresh SC medium, left untreated or treated with the indicated concentration of BCS for the indicated times. For the data in Supplementary Figure 4c, overnight cultures of C. neoformans cells were diluted to an OD600 of 0.3 and grown to an OD600 of 3. After each time point TCA was added to a final concentration of 10%, cells pelleted, collected with 20% TCA and further processed as described. Supernatants from experiment in Supplementary Figure 4c were directly treated with loading buffer before SDS-PAGE and immunoblotting analysis. TCA protein extracts and supernatants were analyzed by immunoblotting with anti-HA (Y-11, polyclonal, Santa Cruz or SG-77, polyclonal, Invitrogen) and anti-H3 (D1H2, polyclonal, Cell Signaling) antibodies.
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2

TCA-based Bim1-HA protein extraction

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TCA-precipitated protein extracts were used to analyze Bim1-HA expression in wild type Bim1-HA or Bim1-HA mutants. For all figures, except Supplementary Figure 4c, overnight cultures of C. neoformans cells were diluted to an OD600 of 0.3 in 5 ml of fresh SC medium, left untreated or treated with the indicated concentration of BCS for the indicated times. For the data in Supplementary Figure 4c, overnight cultures of C. neoformans cells were diluted to an OD600 of 0.3 and grown to an OD600 of 3. After each time point TCA was added to a final concentration of 10%, cells pelleted, collected with 20% TCA and further processed as described. Supernatants from experiment in Supplementary Figure 4c were directly treated with loading buffer before SDS-PAGE and immunoblotting analysis. TCA protein extracts and supernatants were analyzed by immunoblotting with anti-HA (Y-11, polyclonal, Santa Cruz or SG-77, polyclonal, Invitrogen) and anti-H3 (D1H2, polyclonal, Cell Signaling) antibodies.
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3

Western Blot Analysis of Protein Modifications

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Protein samples were denatured with NuPAGE LDS sample buffer containing NuPAGE sample reducing agent and boiled at 70 °C for 10 min prior to use. Proteins were separated by gel electrophoresis using NuPAGE Novex 4–12% Bis-Tris precast gels and transferred onto PVDF membranes using the iBlot gel transfer device (Thermo Fisher Scientific). For dot-blot assays, protein samples were spotted on nitrocellulose membranes (88018, Thermo Fisher Scientific) and dried at room temperature. Membranes were blocked with 5% non-fat milk in 0.2% Tween 20 phosphate buffered saline (PBS) for 30 min at room temperature and probed overnight at 4 °C with the following primary antibodies: mouse monoclonal anti-phosphoepitope SR proteins (1:500, MABE50, Milipore), rabbit anti-HA Tag (1:250, SG77, Invitrogen), mouse monoclonal anti-DYRK1A (1:200, sc-100376, Santa Cruz). Next, membranes were washed and incubated with StarBright Blue 700 goat anti-mouse IgG secondary antibody (1:2500, 12004159, Bio-Rad), StarBright Blue 520 goat anti-rabbit IgG secondary antibody (1:2500, 12005869, Bio-Rad) and hFAB rhodamine anti-tubulin antibody (1:2500, 12004165, Bio-Rad) for 1 h at room temperature. Immunoreactive bands were visualized in a ChemiDoc MP gel imaging system (Bio-Rad). Densitometric analysis was performed using Fiji (ImageJ) software [22 (link)].
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4

Quantifying PLRV Protein Levels and Visualization

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For visualization of the levels of PLRV CP/RTP in AP input samples and verification of fusion protein size in leaves used for microscopy, cryogenically milled tissue [27 (link)] was solubilized on ice for 10 min in an SDS lysis buffer (50 mM Tris-HCL, 10% glycerol, 2.5% SDS, 100 μM DTT, 0.5 mM PMSF, and 1:100 dilution of Halt EDTA-free protease inhibitor cocktail) at a concentration of 200 mg tissue/mL of buffer. Sodium dodecyl sulfate polyacrylamide gel electrophoresis and Western blot analysis was performed, which is described in Reference [27 (link)] without deviation for the detection of PLRV CP/RTP. HA tag or GFP polyclonal antibodies SG77 (Invitrogen, Carlsblad, CA, USA) and ab6556 (Abcam, Cambridge, UK), respectively, were used to detect the viral fusion proteins. Quantification of the levels of PLRV in tissue locally infected with WT or the ΔP17 infectious clone using a double-antibody sandwich ELISA (DAS-ELISA) was performed, as described in Reference [39 (link)].
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