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12 protocols using ammonium molybdate

1

Formulation of Basal Cell Culture Media

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For basal media, Dulbecco's modified Eagle's medium (DMEM) with HEPES, and Coon's modified Ham's F-12 with HEPES (F12) were obtained from Sigma-Aldrich. DMEM without calcium chloride was obtained from Life Technologies (Carlsbad, CA). KBM-Gold™ (keratinocyte basal medium, calcium ion-free) from Lonza (Walkersville, MD).
Unless otherwise stated, the following reagents were used as purchased from Sigma-Aldrich: Alanyl-glutamine, bovine serum albumin, calcium chloride, cholesterol, ethanolamine, fructose, fucose, galactose, glucose, glucosamine, gluconic acid, glucuronic acid, glutathione (reduced), heparin, hydrocortisone, hypoxanthine, lactose, LONG®R3 IGF-1, manganese (II) chloride, non-essential amino acids, oxalacetic acid, progesterone (soluble), putrescine, retinyl acetate (soluble), sodium pyruvate, sodium selenite, TAPSO (N-[Tris(hydroxymethyl)methyl]-3-amino-2-hydroxypropanesulfonic acid), taurine, thioglycerol, partially saturated human transferrin, triiodothyronine (T3), uridine, and vitamin E acetate. Other reagents and sources were as follows: Ascorbic acid phosphate, Mg salt (Wako Chemicals, Richmond, VA); ammonium molybdate (Fisher Scientific, Suwanee, GA); bovine calf serum (CS; Lonza); carnitine tartrate (LKT Laboratories, St. Paul, MN); linoleic acid (Cayman Chemical, Ann Arbor, MI); thiamine and thymidine (Santa Cruz Biotechnology, Dallas, TX).
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2

Visualizing WGA-HRP in Brain Sections

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Brains were frozen, and sectioned at 50 μm in the frontal plane using a sliding microtome (Model 860; American Optical Company, Buffalo, NY). Sections were stored in 0.1 M, pH 7.2 PB. In order to visualize the presence of WGA-HRP, sections were reacted using a tetramethylbenzidine (TMB) protocol that has previously been described (Bohlen et al., 2017 (link)). Briefly, sections were incubated in 0.25% ammonium molybdate (Fisher Chemical), 0.005% TMB (Fisher Chemical), and 2.5% EtOH in pH 6.0, 0.1 M PB. Following an incubation period, the reaction was initiated by adding 0.0125% H2O2 to the aforementioned solution and reacted for up to 18 hr at 4°C. The blue TMB reaction product was then stabilized by incubating sections in 5.0% ammonium molybdate in pH 6.0, 0.1 M PB. Sections were rinsed and mounted onto gelatinized glass slides and allowed to dry overnight. Then, they were counterstained with cresyl violet, dehydrated, cleared, and coverslipped.
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3

Activated Carbon-Supported Metal Catalysts

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EXAMPLE 1

Materials

Activated carbon (AC) derived from waste tires, ammonium molybdate [(NH4)6Mo7O24.4H2O], nickel acetate [Ni(C2H3O2)2.4H2O], cobalt nitrate [Co(NO3)2.6H2O], decahydronaphthalene (Decalin) [C10H18], dibenzothiophene (DBT) [C12H8S], citric acid (CA) [C6H10O7], ethylenediaminetetracetic acid (EDTA) [C10H16N2O8], and deionized water [H2O].

The ammonium molybdate, nickel acetate, and cobalt nitrate were A.C.S certified analytical grades from Fisher Scientific Company, USA. Decalin (99%) and DBT (98%) were obtained from Sigma Aldrich. All the reagents were used as purchased from the manufacturers without any form of pretreatment or modification.

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4

Alginate Extraction and Characterization

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Sodium alginate from Laminaria hyperborea and potassium ferricyanide were obtained from BDH Laboratory Supplies (England). Ammonium molybdate, ethanol, ferric chloride, phenol, sodium chloride, sodium sulphate anhydrous, sulfamic acid, trichloroacetic acid and Trolox were purchased from Fisher Scientific (Ireland). D-mannuronic acid and L-guluronic acid were purchased from Carbosynth (UK). Vivinal GOS was a gift from Dr. Shane O'Connell (Institute of Technology Tralee, Ireland). All other reagents were obtained from Sigma-Aldrich (Ireland). Bacterial cultures were purchased from DSMZ (Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures GmbH, Germany) and from the NCIMB (National Collection of Industrial, Food and Marine Bacteria, UK).
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5

Investigating Protein Phosphatase Activity

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BL21(DE3)pLysS competent cells
were purchased from EMD4Biosciences.
EGF was purchased from Upstate. The monoclonal antibody against HA
(Covance) and the polyclonal antibody against PHLPP2 (Bethyl) were
used to assess expression. A monoclonal anti-HA antibody (Roche) and
protein A/G Ultralink resin (Pierce) were used for immunoprecipitation.
Palmitoleic and linoleic acids were obtained from Acros, and stearic
acid was from AlfaAesar, oleic acid from Sigma, arachidonic acid from
Biomol, and elaidic acid from MP. Ammonium molybdate (Fisher) and
malachite green oxalate (Acros) were obtained at the highest grade
possible. Protein phosphatase peptide substrate (RRAPTVA)
and protein tyrosine phosphatase peptide substrate (ENDPYINASL) were obtained from Enzo, and HFPQFPSYSAS was ordered
from Anaspec. COS7 cells are maintained in DMEM (Cellgro) supplemented
with 5% FBS (Hydroclone) and 1% penicillin/streptomycin at 37 °C
in 5% CO2.
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6

Fabrication of Polyamide FO Membranes

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All chemicals were purchased in analytical grade and used as received. Polysulfone (PSf) beads (UDEL P-3500 LCD MB7, Solvay advanced polymers, L.L.C) and N-methyl-2-pyrrolidone (NMP, Macron, USA) were used to prepare the support layer. Polyvinyl pyrrolidone (PVP, Acros, Pittsburgh, PA, USA) and lithium chloride (LiCl, anhydrous > 99%) were employed as additives in the PSf casting solution. Sodium dodecyl sulfate (SDS, Showa, Japan), 1,3,5-benzenetricarbonyl trichloride (TMC, 98%, Tokyo Chemicals Industry Co., Ltd., Tokyo, Japan), and m-Phenylenediamine (MPD, >99%, Acros, New York, NY, USA) were used to prepare the PA-selective layer. Sodium chloride (NaCl) was purchased from Taiwan Biotech. HNO3, disodium hydrogen phosphate, ammonium molybdate, ammonium ceric sulphate, benzoguanamine, and acetoguanamine were all purchased from Alfa Aesar (Ward Hill, MA, USA). The nanoparticles of graphene oxide (GO, diameter: 90 nm) and titanium dioxide (TiO2, Degussa P-25, diameter: 20 nm) were purchased from UniRegion Bio-Tech (Taiwan) and Showa (Tokyo, Japan) for modifying the active layer of the FO membranes.
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7

Hydrothermal Synthesis of Metal-Based Nanostructures

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Iron(III) chloride hexahydrate (CAS: 10025-77-1), urea 99.3+% (CAS: 57-13-6), ethylene glycol 99% (CAS: 107-21-1), trisodium citrate dihydrate 99% (CAS: 6132-04-3), ammonium molybdate 99% (CAS 13106-76-8), zinc(II) chloride 98% (CAS 7646 85 7), and cobalt(II) chloride hexahydrate 98% (CAS 7791-13-1) were supplied by Alfa Aesar. Succinic acid (CAS: 110-15-6), ammonium hydroxide solution 25% (CAS: 1336-21-6), and nickel(II) chloride 98% (CAS 7718-54-9) were provided by Sigma-Aldrich, and cetyltrimethylammonium bromide 99% (CTAB) (CAS: 57-09-0) by Roth. Deionized water was used for all experiments.
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8

Glyphosate Quantification via Colorimetric Assay

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Roundup (commercial grade, 41%, containing 360 g/L glyphosate) was diluted to prepare a 1000 mg/L glyphosate stock solution with a natural pH of 4.9–5.9. Calcium peroxide (CaO2, 65%), ammonium molybdate (H8MoN2O4, 99%), and ascorbic acid (C6H8O6, 99%) was purchased from Alfa Aesar, Ward Hill, MA, USA. Calcium chloride (CaCl2, ≥99.5%), hydrogen peroxide (H2O2, 30%), ammonia solution (NH4OH, 25 wt%), ferrous sulfate (FeSO4∙7H2O, ≥98%), and ethyl alcohol (C2H5OH, 95%) were supplied from R&M Chemicals Sdn. Bhd. (Semenyih, Malaysia). Polyethylene glycol 200 [HO(C2H4O)nH, PEG 200], antimony potassium tartrate [K2Sb2(C4H2O6)2, 99%], sodium sulfite (Na2SO3, ≥98%, 2.0 M), sodium hydroxide (NaOH), and sulfuric acid (H2SO4, 95%) were procured from Sigma Aldrich (St Louis, MO, USA). Cerium (IV) sulfate tetrahydrate (CeO8S2∙4H2O, ≥98%) was purchased from Acros Organics, Geel, Belgium. All the chemical reagents used in this study were of analytical reagent grade. Distilled water was used throughout the experiments to prepare the solutions and the stock solutions were freshly prepared every week. The pH of the solutions was adjusted by the addition of 0.1 M H2SO4 solution and 0.1 M NaOH solution.
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9

Culturing Fusarium sp. DS 682 on M9 PDA

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Next, 100-μL portions of Fusarium sp. DS 682 spore suspension were added to M9 PDA plates, followed by incubation at 28°C for 2 weeks. M9 PDA medium was prepared by adding micronutrients (see recipe below), 24 g/L potato dextrose (BD Biosciences, San Jose, CA), and 2% granulated agar (BD Biosciences) to M9 salts (MP Biomedicals, Irvine, CA) in Millipore water. The micronutrients consisted of 0.145 mM ammonium molybdate (Thermo Fisher Scientific), 2 mM boric acid (Sigma-Aldrich, St. Louis, MO), 0.151 mM cobalt chloride (Sigma-Aldrich), 0.048 mM cupric sulfate (Sigma-Aldrich), 0.404 mM manganese chloride (Sigma-Aldrich), and 0.048 mM zinc sulfate (Thermo Fisher Scientific). These micronutrients were added after autoclaving the M9 PDA solution, when the solution was ~55°C. After pouring the M9 PDA into petri dishes, the solidified agar plates were wrapped in Parafilm and stored at 4°C for future use. M9 PDA plates were primarily used to maintain the fungal cultures and not in the micromodel experiments described in this paper. The fungal experiments in the micromodel and for proteomics analysis were conducted using PDA plugs and PDA plates, respectively, as described in detail below.
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10

Biogenic Nanohydroxyapatite Synthesis

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Nutrient broth, nutrient agar (HiMedia, Mumbai, India); K2HPO4, CaCl2, NaOH, ammonium persulfate, nanohydroxyapatite (Sigma-Aldrich, Missouri, USA); gluconic acid, sulphuric acid, nitric acid, hydrochloric acid (Merck Millipore, Massachusetts, USA); ammonium molybdate, antimony potassium, ascorbic acid (Fischer Scientific, Massachusetts, USA), nanohydroxyapatite Sisco Research Laboratories Pvt. Ltd. (Mumbai, Maharashtra, India).
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