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7 protocols using aqp 004

1

Immunohistochemical analysis of spinal cord lesions

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Heat-induced antigen retrieval was done on the paraffin embedded sections by boiling the sections in Tris-EGTA buffer, pH 9.0 (CD45), TRS buffer (Target Retrieval Solution, DAKO) (F4/80), or TEG buffer, pH 9.0 (AQP4), first 15 min at 900W, then 9 min at 440W. The sections were allowed to cool in the buffer before blocked for endogenous peroxidase and biotin activity. Sections were then incubated with anti-CD45 (1:100; clone 30-F11 (Ly 5); BD Pharmingen), anti-F4/80 (1:100, AbD Serotec), or anti-AQP4 (1:1250; AQP-004, Alomone labs) antibodies and detected using biotinylated rabbit anti-rat IgG (DAKO) (CD45 and F4/80) or biotinylated donkey anti-rabbit IgG diluted 1:200 followed by ready-to-use anti-rabbit horse-radish perioxidase (HRP)-labelled polymer (EnVision + System, DAKO) with diaminobenzidin (DAB+) as chromogen (DAKO). Nuclei were counterstained using Mayer’s haemalum w/4.5% chloralhydrate. As negative control, the primary antibody was omitted to check for any unspecific reaction from the detection system. As positive control for antibody-specificity, the staining was tested using a mouse multi block containing several different tissues including lymphatic organs. The activation state of CD45+, and F4/80+ microglia and leukocytes and AQP4 expression were investigated in 5 sections (representing 750 μm spinal cord) from each animal centered on the lesion epicenter.
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2

Western Blot Analysis of Spinal Cord Proteins

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Whole spinal cord protein samples from α2+/G301R and α2+/+ littermate mice exposed to SCI and allowed 3 days survival in addition to naïve α2+/G301R and α2+/+ littermate mice were prepared as described [50 (link)]. Equal amounts of protein were separated by SDS-PAGE on 10–14% (α1, α2, α3 and AQP4) gels and electro-blotted onto nitrocellulose membranes (Pharmacia-Amersham). Membranes were blocked in PBS with 5% skimmed milk and 0.5% Tween-20 and incubated with the following primary antibodies: anti-α1 diluted 1:2000 (clone a6f-c, Developmenal Studies Hybridoma Bank), anti-α2 diluted 1:1000 (Merck Millipore), anti-α3 diluted 1:1000 (Merck Millipore), anti-AQP4 diluted 1:1000 (AQP-004, Alomone labs) anti-GAPDH diluted 1:1000 (Abcam), or anti-β-Actin diluted 1:2000 (Sigma-Aldrich) overnight at 4 °C.
Next, membranes were incubated with HRP-conjugated secondary antibodies (swine anti-rabbit HRP diluted 1:2000 (Dako) or rabbit anti-mouse HRP diluted 1:2000 (Dako)) for 1 h at room temperature. Visualization of blots was done in a LAS 3000 imager (Fujifilm) with Amersham ECL Western Blotting Detection Kit (GE Healthcare). Post densitometric analysis and image processing of blots were performed in Image J.
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3

Antibody Panel for Protein Expression

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Sheep anti rat megalin (Moestrup et al. 1993 (link)), rabbit anti rat AQP4 (AQP-004) (Alomone Labs, Jerusalem, Israel), rabbit anti rat AQP1 (AB 2219) (Merck Millipore, Billerica, MA, USA), rabbit anti rat NaK Atpase (α2 isoform) (AB 9094) (Merck Millipore) and goat anti human NKCC1 (SC-21545) (Santa Cruz Biotechnology, Dallas, TX, USA).
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4

Immunohistochemical Analysis of Brain Tissue

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Animals were perfused transcardially with ice-cold saline and brains were removed and immersed into 4% PFA in PBS. After dehydration in 30% sucrose in PBS, coronal sections (30 μm in thickness, one in tenth series) were prepared with a sliding microtome (Leica). For immunofluorescence staining, free floating sections were incubated with the following primary antibodies: goat anti-DCX (sc-8066, Santa Cruz; 1:100), rabbit anti-Ki67 (s2532, Sigma; 1:500), rabbit anti-Iba1 (019-19741, Wako; 1:1,000), rabbit anti-NeuN (MABN140, Millipore; 1:1,000), rabbit anti-MAP2 (4542, Cell Signaling; 1:500), rabbit anti-AQP4 (AQP-004, Alomone labs; 1:1,000) followed by incubation with appropriate secondary antibodies conjugated with 488 (Vector Laboratories, 1:500) or Cy3 or 594 (Jackson, 1:500). For immunohistochemical staining, brain sections were incubated with 3% H2O2 in methanol, to quench endogenous peroxidase activity followed by incubation with primary antibodies: mouse anti-GFAP (G3893, Sigma; 1:2,000) and rabbit anti-vimentin (ab92547, abcam; 1:1,000). After washing, sections were incubated with biotinylated goat anti-mouse or rabbit (1:200, Vector Laboratories). Binding of the antibodies was detected with the Elite kit (Vector Laboratories) with diaminobenzidine (Sigma) and H2O2 for development. All immunostaining analyses were done blindly.
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5

Protein Expression Analysis in Mouse Brain

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Mouse cortex or hippocampal samples were homogenized in RIPA buffer containing 10 mM HEPES (pH 7.4), 150 mM NaCl, 50 mM NaF, 1 mM EDTA, 1 mM dithiothreitol, 1 mM phenylmethylsulfonyl fluoride, 1 mM Na3VO4, 10 μg/ml leupeptin, 10 μg/ml aprotinin, and 1% SDS. Equal amounts of protein (by BCA assay) were resolved by SDS-PAGE and transferred to nitrocellulose membranes. After blocking, membranes were labeled with rabbit anti-AQP4 (AQP-004, Alomone labs; 1:1,000), mouse anti-GFAP (G3893, Sigma; 1:5,000), rabbit anti-vimentin (ab92547, abcam; 1:1,000), goat anti-Iba1 (016-20001, Wako; 1:200), or mouse anti-GAPDH antibody (sc-137179, Santa Cruz; 1:10,000) and incubated with HRP-goat anti-rabbit antibody (GAR007, LiankeBio; 1:5,000) or goat anti-mouse antibody (GAM007, LiankeBio; 1:5,000). Bands were visualized by enhanced chemiluminescence, and the densitometry measurements of the bands were acquired from scanned images with Quantity One software (Bio-Rad).
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6

Immunohistochemical Analysis of Ocular Markers

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Immunohistochemical inv-estigation of different markers was performed in all eyes (n = 10–14 per group for ionized calcium binding adaptor molecule [Iba1] and vimentin) or in a subset of eyes (n = 4–11 for IL-1β, IL-6, Kir4.1, and AQP4). Sections were incubated overnight with primary antibody for Iba1 (1/800; 019-19741; Sopachem, Ede, Netherlands), vimentin (1/400; V5255; Sigma-Aldrich), IL-6 (1/250; ab9324; Abcam, Cambridge, UK), IL-1β (1/1000; ab9722; Abcam), Kir 4.1 (1/200; APC-035; Alomone Labs, Jerusalem, Israel), or AQP4 (1/200; AQP-004; Alomone Labs). The following day, the secondary antibodies were added for 45 minutes: Peroxidase AffiniPure Goat Anti-Rabbit IgG (H+L) for Iba1 and IL-1β (1/100; 111-035-144; The Jackson Laboratory, Bar Harbor, ME); for vimentin and IL-6, Biotin-SP (long spacer) AffiniPure Donkey Anti-Mouse IgG (H+L) (1/300; 715-065-151; The Jackson Laboratory); or, for Kir4.1 and AQP4, Invitrogen Goat Anti-Rabbit IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 568 (1/200; A-11036; Thermo Fisher Scientific, Waltham, MA, USA). The antibody complexes were visualized using an amplifier kit (1/50; TSA Cyanine 3 Kit; PerkinElmer, Waltham, MA, USA), and slides were mounted with ProLong Gold Antifade Mutant with DAPI (4′,6-diamidino-2-phenylindole; P36935; Thermo Fisher Scientific).
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7

Immunolabeling of Astrocytic Markers

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The primary antibodies against Kir4.1 (APC-035) and AQP4 (AQP-004) were from Alomone Lab (Jerusalem, Israel). Dystrophin (ab7164), GFAP (ab53554) and Na+-K+-ATPase (ab76020) antibodies were from Abcam (Cambridge, UK). Glutamine synthetase (GS, NBP2–43646) and VEGF-A (NB100–664) antibodies were from Novus Biological (Littleton, USA). Potassium indicator (P1267MP) and sodium indicator (S1263) were from Thermo Fisher Scientific (Shanghai, China).
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