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Gopod assay kit

Manufactured by Megazyme
Sourced in Ireland

The GOPOD assay kit is a laboratory equipment product manufactured by Megazyme. The kit is designed to determine the glucose content in various samples using a glucose oxidase/peroxidase-based enzymatic reaction. The kit provides the necessary reagents and protocols to perform this analysis.

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10 protocols using gopod assay kit

1

Quantification of Carbohydrate Hydrolysis

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Determination of µmol reducing ends released upon hydrolysis was performed according to [62 (link)] using difference amounts of glucose as calibration curve. Total carbohydrates in plant material were determined upon acid-hydrolysis in accordance with the Laboratory Analytical Procedure of the National Renewable Energy Laboratory (https://www.nrel.gov/): sample was first hydrolyzed in 72% (v/v) sulfuric acid at 30 °C for 1 h and then in 4% (v/v) sulfuric acid at 120 °C for 1 h. Total sugars were estimated spectrophotometrically by using the phenol–sulfuric acid assay [64 (link)]. Glucose released upon the enzymatic hydrolysis was quantified by a glucose-oxidase/peroxidase assay (GOPOD assay kit, Megazyme) and expressed as released glucose vs. total sugars measured in the untreated plant material. Values are reported as mean of three different replicates.
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2

Cellulose Conversion Yield Quantification

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Released glucose, after the pretreatment and enzymatic hydrolysis, was collected after centrifuging the microplates and quantified using the GOPOD assay kit (Megazyme®, USA). Glucose released in control wells was subtracted to determine the cellulose conversion yields expressed as a percentage of the cellulose content.
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3

Measuring Glucose Consumption of E. coli Strains

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In order to explore the glucose consumption amount in different cultures by different E. coli strains, we first measure the glucose content in wide-type BL21(DE3) 1 × M9 culture supplemented with 0.2, 0.4, 0.6, and 0.8% glucose at 0, 4, 6, 10, 12, 14, 16, 18, 20, and 24 h through GOPOD assay kit (Megazyme, Ireland) according to the manufacturer’s instructions. 1 × M9 minimal medium with 0.8% glucose was then used as a standard culture, in which the glucose consumption amount for all the seven strains was measured by following the growth curves. All the experiments were repeated independently for three times.
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4

Enzymatic Saccharification of Lignocellulose

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The same extracted sample used for lignin analysis (30 mg) was pretreated with 450 μL 1% w/v sulphuric acid in an autoclave (Astell, UK) at 121 °C for 1 h in 2 mL tubes or saccharified without pretreatment. Solids were washed three times with 1.5 mL 25 mm sodium acetate pH 4.5. Saccharifying enzyme mixture (Celluclast and Novozyme 188 (Sigma)) was prepared as described in Gomez et al. (2010). The FPU (filter paper unit) activity (65 FPU/mL) of the purified mixture was measured (Adney and Baker, 1996) along with β‐glucosidase activity (95.7 CBU/mL) (Ghose, 1987). Saccharification was performed with an enzyme loading of 0.6 FPU per 30 mg of sample in 25 mm sodium acetate pH 4.5 with 0.02% w/v NaN3 in a total volume of 1.5 mL for 72 h at 50 °C with shaking. Triplicate reactions were performed per plant. Glucose released was quantified using the GOPOD assay kit (K‐GLUC) (Megazyme, Ireland) scaled for a 96‐well plate and expressed as a proportion of the 30 mg extracted sample.
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5

Glucose Adsorption Capacity of Berry Pomace

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The glucose adsorption capacity (GAC) of the berry PP was determined according to the method described by Bhutkar et al. [25 (link)], with certain modifications. The berry PP (1 g) was mixed with 25 mL of glucose solution of varying concentrations (0, 5, 10, 50, and 100 mmol/L) and incubated for 6 h at 37 °C, with periodical mixing at 120 rpm (GFL 1092, Thermolab, Germany). Next, the glucose concentration was determined using a glucose oxidase/peroxidase (GOPOD) assay kit (Megazyme, Ireland). The GAC was calculated as follows: GAC mmol/L=C1C2 C3 m×V
where C1 is the concentration of the original glucose solution; C2 is the concentration of the glucose in the samples with the berry PP and various concentrations of glucose solution (5, 10, 50, and 100 mmol/L) after 6 h of incubation; C3 is the concentration of glucose in the samples with the berry PP aqueous solution after 6 h of incubation; m is the weight of the berry pomace (g); and V is the volume of the sample (mL).
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6

Berry Pomace Glucose Diffusion Assay

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The glucose diffusion was determined according to the method described by Bhutkar et al. [25 (link)], with certain modifications. In total, 1 g of berry PP was mixed with 25 mL of 20 mmol/L glucose solution or 25 mL of water. The mixtures were dialyzed against 200 mL of distilled water in dialysis bags at 37 °C, with periodical mixing at 120 rpm (GFL 1092, Thermolab, Germany). Samples from the dialysate were collected at various time intervals (30, 60, 120, and 180 min) and the glucose concentration was determined using a GOPOD assay kit (Megazyme, Ireland). A control sample was prepared that did not contain berry PP. The glucose dialysis retardation index (GDRI) was calculated as follows: GDRI%=100C2 C3C1 ×100
where C1 is the glucose content of the control, C2 is the glucose content of the samples with the berry pomace in the glucose solution, and C3 is the glucose content of the samples with the berry pomace in the aqueous solution.
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7

Production and Analysis of GalOS

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The β-galactosidase (β-gal) was produced from Escherichia coli BL21 containing gene from L. reuteri L103 following procedure explained by Iqbal et al. [47 (link)]. The enzyme activity was measured for chromogenic substrate oNPG and natural substrate lactose following methods by Splechtna et al. [48 (link)]. The crude β-gal was used for the production of GalOS through bioconversion of lactose by following method of Splechtna, Nguyen, Steinböck, Kulbe, Lorenz and Haltrich [48 (link)]. The transgalactosylated mixture were analyzed for glucose using GOPOD assay kit (K-GLUC) however galactose and lactose were measured using Lactose/Galactose assay kit (K-LACGAR) from Megazyme (Wicklow, Ireland) by following protocol given in the provided documents. The main glycosidic linkage in present prebiotic GalOS was β-1,6 with main products β-d-Galp-(1–6)-d-Glc, β- d-Galp-(1–6)-d-Gal and β-d-Galp-(1–6)-Lac, followed by β-1,3 linked products, i.e., β- d-Galp-(1–3)-d -Gal and β-d-Galp-(1–3)-Lac. While no product with β1–4 linkage was identified [47 (link),48 (link)] as composition determined by High performance anion exchange chromatography with pulsed amperometric detection (HPAEC-PAD) and capillary electrophoresis.
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8

Comparative Analysis of Millet Cultivars

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Three millet cultivars harvested from different areas in inner Mongolia Chifeng, Ordos, and Tongliao, respectivey, with a known starch content of 70.7%, 69.0%, and 79.1%, respectively, were used and denoted as M1, M2, and M3, respectively. Dimethyl sulfoxide (DMSO, HPLC grade for analysis) was obtained from Merck Co. Inc. (Darmstad, Germany). Protease (type XIV, from Streptomyces griseus), Pepsin (672 U/mg, from porcine gastric mucosa), α-amylase (≥5 U/mg, from porcine pancreas), and amyloglucosidase (≥260 U/mL, from Aspergillus niger) were purchased from Sigma-Aldrich Pty (St. Louis, MO, USA). Isoamylase (200 U/mL) and GOPOD assay kit were purchased from Megazyme Ltd. (Wicklow, Ireland). All other reagents were of analytical grade.
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9

Determining Starch Digestibility in Flours

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The digestibility of starch in the flour samples studied was determined in uncooked states according to the procedures of Englyst et al. [31 ] with slight modifications. The flours (0.80 g, dry basis), guar gum (0.05 g), and sodium acetate buffer (0.25 M, pH 5.2) (20 mL) were mixed with an enzyme solution of pancreatin and amyloglucosidase (5 mL) thoroughly. The mixture was incubated at 37 °C in a water bath with shaking for 2 h. During incubation, aliquots (0.25 mL) of the mixture were taken at different points in time (20, 60, 90, and 120 min). These aliquots were then mixed with ethanol (66% v/v, 10 mL) to terminate the enzymatic reaction and then centrifuged at 1500× g for 10 min. The supernatant was used to analyze the amount of glucose released using the GOPOD assay kit (Megazyme International Ireland Ltd., Wicklow, Ireland). The percentage of starch hydrolysis at different hydrolysis times and starch fractions (RDS, SDS, and RS) were calculated as follows:



where Ght is the glucose content released in each hydrolysis time; G20 and G120 are the glucose content released at 20 and 120 min of hydrolysis, respectively; and TS is total starch content.
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10

Insulin Resistance in Adipocytes

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After adipogenic induction of hAMSCs, mature adipocytes were obtained. Insulin resistance was induced by the administration of 10 ng/mL TNF-α for 48 h and cultured in high glucose medium (25 and 35 mmol/L glucose) for 24 h. After serum starvation in low glucose DMEM overnight, 10 ng/mL insulin was added to the starved adipocytes. The glucose uptake assay was performed by the glucose oxidase/peroxidase (GOPOD) method (GOPOD assay kit, Megazyme International, Ireland) according to the manufacturer's instructions. Residual glucose in the cell media was determined by measuring the absorbance (A) at 510 nm (Biotek Synergy, USA). Based on the obtained value of the residual glucose, the percentage of glucose uptake was calculated.
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