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Plant total rna kit

Manufactured by Tiangen Biotech
Sourced in China

The Plant Total RNA Kit is a laboratory product designed for the extraction and purification of total RNA from plant tissue samples. It provides a reliable and efficient method to isolate high-quality RNA for downstream applications such as gene expression analysis, RT-PCR, and RNA sequencing.

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6 protocols using plant total rna kit

1

Blueberry Fruit Transcriptome Profiling

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Blueberry (Vaccinium corymbosum ‘Sierra’) fruits were harvested from an organic blueberry farm (Tianshuo Farm in Hebei Province, China) during the 2013 to 2015 growing season. The tissues at three different developmental stages including green fruit (G, 30d), pink fruit (P, 50d) and blue fruit (B, 75d), were randomly sampled in the field from 4- or 5-year-old healthy blueberry plants. The plants had been propagated by tissue culture, thus all came from the same mother plant. All samples intended for RNA extraction were flash-frozen in liquid nitrogen immediately after collection and stored at −80 °C until use. Fifty fruits were collected at each time point and combined for RNA extraction. RNA was extracted using the Plant total RNA Kit (TIANGEN, Beijing, China). The purified RNA quality and quantity was evaluated using a spectrophotometer (Thermo Scientific, Waltham, MA, USA) and an Agilent 2100 Bioanalyzer (Agilent Technologies, Santa Clara, CA, USA).
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2

Quantitative Expression of UGT and GLS

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After 6 days of culturing for the wild-type and mutant strains in different nitrogen sources, the total RNA of strains was extracted using the plant total RNA kit (Tiangen Biotech, Beijing, China), and cDNA was synthesized using a reverse transcription kit (TransGen Biotech, Beijing, China). Finally, the relative expression levels of UGT and GLS were quantitatively determined using β-actin as an internal reference by QPCR kit from Promega; the kit used SYBR green as the fluorescence label, and the expression levels were assessed using 2-ΔΔCT.
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3

Plant RNA Extraction and qRT-PCR

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For RNA extraction, we used the Plant Total RNA Kit (Tiangen, Beijing, China), and PrimeScript™ RT Reagent Kit with gDNA Eraser (TaKaRa, Kusatsu, Japan) was used for the synthesis of the first-strand cDNA. The ABI Step, One Plus instrument was used for qRT-PCR experiments. Experiments were repeated 3 times. The comparative 2−ΔΔCT (A method of qRT-PCR fluorescence quantitative data analysis, ΔΔCt = ΔCt experimental group − ΔCt control group) method was used for gene expression level analysis. For quantitative analysis, Exocyst complex component gene (Sec3A) was used as the internal reference. Reactions contained the following: 5 μL of 2x × TB Green Premix Ex Taq II, 1 μL of template cDNA, 0.4 μL of forward and Universal miRNA qPCR Primer, 0.2 μL of Passive Reference Dye and water to 10 μL. PCR amplification was performed as follows: 95 °C for 30 s, 40 cycles of 95 °C for 5 s, 58 °C for 30 s.
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4

Transcriptome Analysis of Plant Samples

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Total RNA of six samples in MBSes were extracted with a plant total RNA kit (TIANGEN®). A NanoDrop® ND-1000 (Thermo Scientific, Waltham, MA, USA) was used to determine the quality and concentration of RNAs, and RNA integrity was further confirmed via electrophoresis on 1% agarose gels. About 30 μg of total RNA from each sample (stage 1, 3, and 5) was used for Illumina sequencing at Biomarker Technologies (Beijing, China). Total mRNA was isolated by an NEB Next Poly (A) mRNA Magnetic Isolation Module (NEB, E7490) or a MICROBExpres Bacterial mRNA Enrichment Kit (Invitrogen, AM1905). All procedures for cDNA library construction were carried out on the NEB Next mRNA Library Prep Master Mix Set for Illumina (NEB, E6110) and the NEB Next Multiplex Oligos for Illumina (NEB, E7500). Sequencing of the purified libraries was performed by an Illumina GA-II (Illumina Inc., Chicago, IL, USA).
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5

Transcriptome Analysis of Sand Rice

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Leaves, stem, roots, and inflorescences of sand rice (Additional file 2) were sampled in wild field, Yiwanquan, Jingtai County, Gansu
province, northwest of China (37°2150″N,
104°0837″E), where the average annual precipitation
is 180 mm from 1950 to 2000 (http://www.worldclim.org/). All samples
were immediately frozen in liquid nitrogen and stored at −80°C for later
RNA extraction.
Total RNA from each tissue was extracted with Plant total RNA Kit (TIANGEN, Beijing,
China). The concentration and quality of each RNA sample were determined by 1% agrose
gel electrophoresis, NanoDrop 2000™ micro-volume spectrophotometer
(Thermo Scientific, Waltham, MA, USA) and Agilent 2100 Bioanalyzer (Agilent
Technologies, Santa Clara, CA, USA). Equal amounts of purified RNA from each of the
four tissues were pooled together to construct the cDNA library.
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6

SAMs Harvesting and S. reilianum Detection

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SAMs were harvested from infected NILs at 21 DAS. Total RNA was extracted using the plant Total RNA kit (Tiangen), and first-strand cDNA was synthesized using the Easy Script first-strand cDNA synthesis kit (Transgen). The presence or absence of S. reilianum was assessed with PCR and the S. reilianum-specific primer SRac (sr11345). PCR cycling was as follows: 95°C for 5 min, followed by 35 cycles of 95°C for 30 s, 60°C for 30 s, and 72°C for 30 s, with a final 72°C for 10 min. PCR products were examined in 1% agarose gels, after staining with ethidium bromide.
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