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Agilent 6320 ion trap mass spectrometer

Manufactured by Agilent Technologies
Sourced in United States

The Agilent 6320 Ion Trap mass spectrometer is a highly sensitive analytical instrument used for the detection and identification of chemical compounds. It operates by ionizing samples and then using electric and magnetic fields to separate the ions based on their mass-to-charge ratio. The resulting mass spectrum provides detailed information about the molecular composition of the sample.

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6 protocols using agilent 6320 ion trap mass spectrometer

1

Spectroscopic Characterization of Organic Compounds

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Melting points (uncorrected) were recorded on a Barnstead 9100 Electrothermal melting apparatus (APS Water Services Corporation, Van Nuys, CA) while the IR spectra were recorded on a FT-IR Perkin-Elmer spectrometer (PerkinElmer Inc., Waltham, MA). The 1H NMR and 13C NMR were measured in DMSO-d6 or CDCl3, on Bruker 700 or 500 and 176 or 125 MHz instruments, respectively (Bruker, Billerica, MA). Chemical shifts are reported in δ ppm. Mass spectra were recorded on an Agilent 6320 Ion Trap mass spectrometer (Agilent Technologies, Santa Clara, CA). C, H, and N were analysed at the Research Centre, College of Pharmacy, King Saud University, Saudi Arabia. The results were within ±0.4% of the theoretical values. Compounds 4, 8, 9, 12–17, and 22–24 were prepared according to a previously reported procedure6 (link)b,24 (link).
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2

Ion Trap Mass Spectrometry Analysis

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An Agilent 6320 Ion trap mass spectrometer (Agilent technologies, USA) equipped with an electrospray ionization interface (ESI) was used. A connector is used instead of the column to allow direct injection of samples. Mobile phase was composed of a mixture of solvents A and B (1 : 1), where A is HPLC grade water and B is acetonitrile. Compounds were prepared by weighing the solid substances to 1 mg·mL−1 in mobile phase. Test solutions were prepared by diluting the stock solutions to 10–30 μgmL−1—depending on the ions intensities—with mobile phase. Flow rate was 0.2 mL min−1 and run time was 4 minutes. MS parameters were optimized for each compound. The scan was ultrascan mode. For screening of mass signals of the different compounds and to search for parent ions for MS/MS experiments, MS2 scans were performed in the mass range of m/z 50–400. The ESI was operated in positive mode. The source temperature was set to 350°C nebulizer gas pressure of 55.00 psi, dry gas flow rate of 12.00 L min−1.
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3

Analytical Characterization of Organic Compounds

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Optical rotation: Perkin-Elmer Model 341 LC polarimeter (Perkin-Elmer, Waltham, MA, USA). UV spectra: in MeOH using a Perkin-Elmer Lambda 25 UV/VIS spectrophotometer (Perkin-Elmer, Waltham, MA, USA). IR spectra: Shimadzu Infrared-400 spectrophotometer (Shimadzu, Kyoto, Japan). ESIMS spectra: Agilent 6320 Ion trap mass spectrometer (Agilent Technologies, Santa Clara, CA, USA) equipped with an electrospray ionization interface. NMR spectra: Bruker DRX 700 spectrometer (Bruker, Rheinstetten, Germany). Column chromatographic separations: silica gel 60 (0.04–0.063 mm, Merck, Darmstadt, Germany). TLC analyses: pre-coated silica gel F254 aluminum sheets (Merck, Darmstadt, Germany).
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4

Characterization of Organic Compounds

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Melting points (uncorrected) were recorded on a Barnstead 9100 Electrothermal melting apparatus (APS Water Services Corporation, Van Nuys, CA, USA), while the IR spectra were recorded on a FT-IR Perkin-Elmer spectrometer (PerkinElmer Inc., Waltham, MA, USA). The 1H NMR and 13 C NMR were measured in DMSO-d6 or CDCl3, on Bruker 700 or 500 and 176 or 125 MHz instruments, respectively (Bruker, Billerica, MA, USA). Chemical shifts are reported in δ ppm. Mass spectra were recorded on an Agilent 6320 Ion Trap mass spectrometer (Agilent Technologies, Santa Clara, CA, USA). C, H, and N were analysed at the Research Centre, College of Pharmacy, King Saud University, Saudi Arabia. The results were within ± 0.4% of the theoretical values. Compounds 3, 11, 16, 19, and 20 were prepared according to a previous report65 (link).
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5

Spectroscopic Characterization of Compounds

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The 1H NMR spectrum was recorded with a Bruker 700 MHz NMR spectrometer in deuterated dimethyl sulfoxide (DMSO-d6) using tetramethylsilane (TMS) as the internal standard. Chemical shifts (δ) are reported in ppm, and J values are reported in Hz. The following abbreviations were used in reporting spectrum data: s (singlet), d (doublet), t (triplet), q (quartet), dd (doublet of doublets), td (triplet of doublets), and m (multiplet). An Agilent 6320 Ion Trap mass spectrometer (Agilent Technology, La Jolla, CA, USA) was used to obtain the mass spectra for all compounds.
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6

Synthesis of 4-(2-(2-mercapto-4-oxoquinazolin-3(4H)-yl)ethyl)benzenesulfonamide

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Stirring of anthranilic acid with 4-(2-isothiocyanatoethyl)benzenesulfonamide in ethanol containing trimethylamine gave 4-(2-(2-mercapto-4-oxoquinazolin-3(4H)-yl)ethyl)benzenesulfonamide (1) [55 (link),59 (link)]. Melting points (uncorrected) were recorded on a Barnstead 9100 Electrothermal melting apparatus (APS Water Services Corporation, Van Nuys, CA, USA). In contrast, the KBr disc IR spectra are recorded on an FT-IR Perkin-Elmer spectrometer (PerkinElmer Inc., Waltham, MA, USA). The 1H NMR and 13C NMR were measured in DMSO-d6 on Bruker 700 and 176 MHz instruments, respectively (Bruker, Billerica, MA, USA). Supporting Information: 1H NMR and 13C NMR of compounds 227. Mass spectra were recorded on an Agilent 6320 Ion Trap mass spectrometer (Agilent Technologies, Santa Clara, CA, USA). C, H, and N were analyzed at the Research Centre, College of Pharmacy, King Saud University, Saudi Arabia. The results were within ±0.4% of the theoretical values.
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