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Bca protein assay

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The BCA protein assay is a laboratory analysis tool used to determine the concentration of protein in a sample. It is a colorimetric detection method that uses bicinchoninic acid (BCA) to measure the total protein content. The assay provides a reliable and accurate way to quantify protein levels across various applications.

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99 protocols using bca protein assay

1

Western Blot Analysis of Cellular Proteins

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Western blot was performed as the previously described [26 (link)]. Briefly, total protein was extracted using RIPA buffer added with PMSF and phosphatase inhibitors. Protein concentration was determined using BCA protein assay (Millipore, Switzerland). Then, 20 μg of protein was separated by SDS-PAGE and transferred to polyvinylidene difluoride membranes (PVDF, Millipore, USA). After blocked with 5% non-fat milk, the membrane was incubated with primary antibody against PCNA (1:2000), Snail (1:1000), Vimentin (1:1000), E-cadherin (1:1000), N-cadherin (1:1000), integrin β1 (1:1000), Shc (1:1000), phosopho-Shc (1:2000), ERK1/2 (1:1000) or phosopho-ERK1/2 (Thr202/Tyr204) (1:2000) (Cell Signaling Technology, USA), periostin (1:1000), collagen I (1:5000), α-SMA (1:300) or anti-vitamin D receptor antibody (1:1000) (Abcam, USA), GAPDH (1:1000), tubulin (1:1000) or β-actin (1:1000) (Beyotime, China) at 4 °C overnight and the corresponding HRP-conjugated secondary antibody for 1 h at room temperature on the next day. The membrane was developed with enhanced chemiluminescence (ECL; New Cell & Molecular Biotech Co., China).
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2

NKTR Protein Expression Analysis

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Cells were harvested and prepared using the Radio Immunoprecipitation Assay (RIPA) lysis buffer (Boster, China). Protein concentrations of the samples were determined using the bicinchoninic acid (BCA) protein assay (Millipore, Bedford, MA, USA). Each sample (30 μg) was boiled to denature the protein, and western blot analysis was performed. The primary antibodies used were polyclonal antibodies against NKTR (1:1,000, AAA515N, Invitrogen, Carlsbad, CA, USA) and β-actin (1:5,000, M1210-2, HuaBio, China).
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3

Intestinal Barrier Function Biomarkers

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Concentrations of iFABP2, zonulin, and sCD14 were quantified from plasma and acetylated histone H3 was quantified from colon intestinal homogenate histone extracts using commercially available ELISA kits (My Biosource #MBS740424, Alpco #30-ZONSHU-E1, R&D #DC140, and abcam #ab115102, respectively), according to the manufacturers’ protocols. Histone extracts were normalized to 200–400 ng/uL by BCA protein assay (Millipore). All samples were assessed as technical duplicates. iFABP2 and sCD14 were independently confirmed (data not shown).
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4

Protein Immunoblotting Protocol

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A BCA protein assay (Millipore) was used for protein measurements. Cell and tissue extracts were run on 8–16% Tris-glycine gels in Tris-glycine running buffer and transferred onto 0.2 µm nitrocellulose membranes. LiCor total protein stain (LI-COR, USA) was used to ensure equality of protein loading and is presented in Fig. S4. After blocking in 5% non-fat milk or 5% BSA, membranes were processed for immunoblotting. Immunodetection was obtained using ECL reagent (GE Healthcare, USA) and developed using Fujifilm X-ray film.
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5

Isolation of Trichinella spiralis Adult Worms

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T. spiralis (strain ISS 533) was maintained in female ICR mice. The muscle larvae were recovered from infected mice by digestion of the carcasses in artificial gastric juice (32 (link)). The recovered muscle larvae were used to infect rats orally with 14,000 larvae each. Six days after infection, each rat was euthanized, and the adult T. spiralis worms were collected from intestine. The collected adult worms were washed several times with sterile saline (0.9% NaCl) and cultured in RPMI-1640 (Thermo Fisher, Carlsbad, USA) supplemented with 200 U penicillin/ml and 200 μg streptomycin/ml (Caisson labs, Logan, USA) at 3000 worms/ml at 37°C, 5% CO2, for 48 h. Cultured medium containing AES products was collected and concentrated buffer-exchanged to PBS using a centrifugal filter (Millipore Amicon Ultra-15, NMWL: 3000, USA), and buffer-exchanged to PBS (32 (link)). Protein concentration in AES was determined using the BCA protein assay (Merck, Darmstadt, Germany).
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6

Purification of His10-SUMO2 and His10-Ubiquitin Conjugates

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Proteins conjugated to His10-SUMO2 or His10-ubiquitin were purified as described previously [31 (link)]. U2OS and Namalwa cells stably expressing His10-SUMO2 or His10-ubiquitin were lysed in 6 M Guanidine-HCL, 100 mM Sodium phosphate, 10 mM Tris, buffered at a pH of 7.8 and subsequently snap frozen. Lysates were thawed at room temperature, sonicated 2x for 10 s, supplemented with 5 mM β-mercaptoethanol and 50 mM imidazole pH 8.0. Samples were equalized using the bicinchoninic acid (BCA) Protein Assay (Merck). Ni-NTA beads (30210, Qiagen, Hilden, Germany) were added to the lysates and incubated overnight at 4 ˚C. Ni-NTA beads were washed extensively. Purified proteins were eluted three times in one bead volume of 7 M urea, 100 mM sodium phosphate, 10 mM Tris pH 7.0, and 500 mM imidazole pH 7.0. Elutions obtained for immunoblot analysis were supplemented with LDS sample buffer. Elutions for mass spectrometry analysis were trypsin digested.
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7

Quantification of Alkaline Phosphatase Activity

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The activity of alkaline phosphatase (ALP), a widely accepted early marker of osteogenesis in bone-forming cells,28 (link) was assessed on cells grown for 14 days on glass or P3HT substrates, under either standard culture conditions or osteogenic stimuli (10 nM dexamethasone, 10 mM glycerol-2-phosphate, 150 mM l-ascorbic acid and 10 nM cholecalciferol, Sigma Aldrich). Briefly, cells were washed in phosphate buffer saline and lysed in 50 μL 0.1% Triton X-100 (Sigma Aldrich). ALP activity was assessed through a colorimetric assay based on the conversion of p-nitrophenyl phosphate into p-nitrophenol, as exhaustively described by Canciani et al.29 (link) The enzymatic activity (U) was inferred based on the amount of produced p-nitrophenol and the reaction time, then normalized with respect to each sample's protein concentration determined by BCA™ Protein Assay (Merck) and expressed as U μg−1.
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8

Purification and Characterization of CMG2-Fc Mutant Protein

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The CMG2-Fc mutant protein was purified using rProtein A affinity chromatography (GE, Piscataway, NJ, USA) according to the manufacturer’s recommended protocol and eluted with 100 mM Gly-HCl buffer (pH 3.0). The collected fractions were quantified using a BCA Protein Assay (Merck, Darmstadt, Germany), identified by SDS-polyacrylamide gel electrophoresis (under reducing and non-reducing conditions), and visualized by Coomassie G250 staining and Western blot analysis. The target protein was further analyzed by isoelectric focusing electrophoresis and mass spectrometry.
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9

Protein Extraction and Fractionation from HCT116 Cells

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The T-PERTM Tissue Protein Extraction Reagent (Thermo Fisher Scientific) combined with the HaltTM protease inhibitor cocktail (Thermo Fisher Scientific) was used to lyse the HCT116 cells. The lysate was centrifuged at 17,000 × g for 20 min at 4°C, and the supernatant was recovered as a detergent soluble fraction as previously described.66 (link) The insoluble pellet was dissolved in T-PERTM Tissue Protein Extraction Reagent supplemented with 2% sodium dodecyl sulfate and centrifuged at 17,000 × g for 20 min at 4°C. The supernatant was separated into insoluble fractions. The concentration of each protein fraction was determined using the BCA protein assay (Merck, Shanghai, China) and analyzed using western blotting.
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10

Western Blot Analysis of ETS1 and ERK1/2

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Total protein was isolated from BEAS-2B cells using RIPA Lysis Buffer (cat. no. 20-188; Merck KGaA), then quantified with BCA Protein Assay (cat. no. P0012; Beyotime Institute of Biotechnology) and the protein was denatured in a 95˚C water bath for 5 min. Proteins (30 µg/lane) were separated by 10% SDS-PAGE, transferred onto PVDF membranes (Millipore; Merck KGaA), blocked with 5% non-fat milk for 2 h at room temperature and incubated overnight at 4˚C with the following primary antibodies: Anti-ETS1 (cat. no. ab220361; Abcam; 1/1,000); anti-phosphorylated (p)-ERK1/2 (cat. no ab201015; Abcam; 1/1,000); anti-ERK1/2 (cat. no. ab184699; Abcam; 1/8,000) and anti-GAPDH (cat. no. ab181602; Abcam; 1/10,000). This was followed by incubation with rabbit anti-mouse horseradish peroxidase-conjugated secondary antibodies (cat. no. ab6721; Abcam; 1/5,000) for 60 min at room temperature. Protein bands were scanned and imaged using Immobilon® Western HRP Substrate ECL chemiluminescence reagent (cat. no. WBKLS0500; Merck KGaA). Densitometry analysis was performed using ImageJ software (Version 1.53e; National Institutes of Health) with GAPDH as the loading control.
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