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14 protocols using mhcc97h

1

Cell Culture Protocols for Hep3B and MHCC-97H

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Hep3B and MHCC‐97H cells were obtained from Zhong Qiao Xin Zhou Biotechnology Co., Ltd. (Shanghai, China) and cultured in Dulbecco's modified Eagle's Medium (DMEM; Gibco, Big Cabin, UK) supplemented with 10% foetal bovine serum, 100 IU/mL penicillin and 100 μg/mL streptomycin. Cells were maintained in a humidified incubator at 37°C and 5% CO2.
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Cell Culture Conditions for Liver Cancer

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LO2, HepG2, Hep3B, MHCC97H, and HCCLM3 cell lines were sourced from Shanghai Zhong Qiao Xin Zhou Biotechnology Co. Ltd. HEK293T cells were stored in the central laboratory of our hospital, Guangzhou, China. The cells were cultured in a DMEM medium containing 10% fetal bovine serum at 5% CO2 and 37 °C.
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HCC Cell Lines Culture Protocol

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Human HCC cell lines MHCC-97H (Zhong Qiao Xin Zhou Biotechnology Co., Ltd, China), PLC/PRF/5 (Hongbo Biotechnology, China), HCCLM3, SK-Hep1, and mouse HCC cell line (Procell, China) were cultured in DMEM containing high glucose (Biological Industries, Israel) with 10% fetal bovine serum (Biological Industries, Israel) at 37 °C in a humidified atmosphere containing 5% CO2. 100 mg/mL penicillin G and 50 μg/mL streptomycin (Biological Industries, Israel) were added. All cell lines were identified by STR and mycoplasma tests and all were used within 3 months after thawing early passage cells.
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Culturing Hepatocellular Carcinoma Cell Lines

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Hepatocellular carcinoma cell lines, HepG2, SK‐hep‐1, Huh‐7, and the normal liver epithelium cell line LO2, were purchased from the Cell Bank of the Chinese Academy of Sciences. Meanwhile, another HCC cell line, MHCC‐97H, was purchased from Shanghai Zhong Qiao Xin Zhou Biotechnology Company. All cell lines were cultured in high‐glucose Dulbecco's modified eagle medium (Gibco) supplemented with 10% fetal bovine serum (Biological Industries), 100 U/mL penicillin, and 100 mg/mL streptomycin. All cells were maintained at 37.0°C in an atmosphere containing 5% CO2.
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5

Liver Cancer Cell Line Cultivation and Manipulation

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The human LIHC cell lines HepG-2 and Huh-7 were obtained from Procell Life Science&Technology Co., Ltd. (Wuhan, China). The human LIHC cell lines MHCC97-H and HCCLM-3 were obtained from Zhong Qiao Xin Zhou Biotechnology Co., Ltd. (Shanghai, China). The human normal liver cell line HL-7702 (L02) were obtained from Guan&Dao Biological Engineering Co., Ltd. (Shanghai, China). HepG-2, Huh-7, MHCC97-H and HCCLM-3 cells were cultured in DMEM (Cytiva, Utah, USA) with 10% FBS (Gibco, NY, USA) plus 1% penicillin and streptomycin (Sangon, Shanghai, China). L02 cell line was cultured in RIPA 1640 medium (Cytiva, Utah, USA) with 10% FBS plus 1% penicillin and streptomycin. All of the cells were cultured under humidified condition with 5% CO2 at 37 °C. The authentication of these cell lines was performed via comparisons with the STR database.
The lentivirus vectors LV–NC–shRNA, LV-CCDC115-shRNA and LV-CCDC115-OE were purchased from GenePharma (Shanghai, China). HepG-2 and HCCLM-3 cells were infected with lentivirus (MOI: HepG-2 cell = 80 pfu/cell; HCCLM-3 cell = 100 pfu/cell) with hexadimethrine bromide (5 μg/mL, GenePharma) for 72 h and puromycin (GenePharma) at the concentration of 2 μg/mL (HepG-2) or 2.5 μg/mL (HCCLM-3) was used to select for stably transfected cells.
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6

EFNA4 and Hepatocellular Carcinoma Cell Lines

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The HCC cell lines Hep G2, Hep 3B, Huh7, and MHCC-97H, as well as normal hepatic epithelial cell line (LO2), were obtained from Zhong Qiao Xin Zhou Biotechnology (Shanghai, China). All cells were cultured in cell culture dishes (Guangzhou Jet Bio-Filtration, Guangzhou, China) and maintained in Dulbecco’s modified Eagle’s medium (DMEM), supplemented with 10% (v/v) fetal bovine serum and 5 mg/mL penicillin/streptomycin at 37°C with 5% CO2. EFNA4-targeting siRNA and scramble control siRNA were purchased from RiboBio (Guangzhou, China). EFNA4-targeting sequences were as follows: siRNA #1, 5′-GGGCCTCAACGATTACCTA-3′; siRNA #2, 5′-GGAGAGACTTACTACTACA-3′. PIK3R2-targeting sequences were as follows: siRNA #1, 5′-GCACCTATGTGGAGTTCCT-3′; siRNA #2, 5′-GGCCAGACTCAAGAGAAAT-3′. β-catenin-targeting sequences were as follows: siRNA #1, 5′-GCCACAAGATTACAAGAAA-3′; siRNA #2, 5′-GACTACCAGTTGTGGTTAA-3′. The overexpression plasmids pcDNA3.1-EFNA4 as well as the empty vector (pcDNA3.1) were obtained from Sino Biological (Beijing, China). Cell transfection was performed using Lipofectamine 3000 (Thermo Scientific, Waltham, MA, USA) according to the instructions provided by the manufacturer. The expression level of EFNA4 was detected by quantitative real-time PCR.
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Culturing MHCC97-H Liver Tumor Cells

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The human liver tumor cell line MHCC97-H was obtained from Shanghai Zhong Qiao Xin Zhou Biotechnology Co., Ltd. (Shanghai, China) and maintained in Dulbecco's modified Eagle's medium (DMEM; Gibco; Thermo Fisher Scientific, Inc., Waltham, MA, USA) containing 10% fetal bovine serum (FBS; Excell Biology, Inc., Shanghai, China), penicillin (100 U/ml) and streptomycin (100 µg/ml) (Gibco; Thermo Fisher Scientific, Inc.) under 95% air and 5% CO2 at 37°C. For cell treatments, MHCC97-H cells were cultured and treated with FK866 (Beyotime Institute of Biotechnology; Shanghai, China) at concentrations of 0, 1.25, 2.5, 5, 10, 20 and 40 nM.
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8

Hepatocyte and Hepatocellular Carcinoma Cell Lines

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Human normal hepatocyte NHC (Jining Shiye, Shanghai, China) and HCC cell lines MHCC97H (Shanghai Zhong Qiao Xin Zhou Biotechnology Co., Ltd., Shanghai, China), Huh7, and Hep3B (National Collection of Authenticated Cell Cultures, Shanghai, China) were included in this study. The Hep3B cells were cultured in minimal essential medium (Gibco, Carlsbad, CA, USA) plus 10% FBS (Gibco), 50 U/mL penicillin (Gibco), and 100 μg/mL streptomycin (Gibco). NHC, MHCC97H, and Huh7 cells were cultured with Dulbecco's Modified Eagle's Medium (DMEM). The culture condition was at 37°C in a 5% CO2 cell incubator (Thermo Fisher Scientific Inc., Waltham, MA, USA). The media were renewed daily. After 3-4 d, the cells were subcultured, and the cells in logarithmic growth phase and in good growth condition were selected for the following assays.
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9

Overexpression and Knockdown of CSNK1D and DVL3 in HCC Cells

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HCC cell lines HepG2 (catalog number, #SCSP-510), Hep3B (catalog number, #SCSP-5045), and BEL-7404 (catalog number, #TCHu64) were provided by the Cell Bank of the Chinese Academy of Sciences (Shanghai, China). MHCC97H (catalog number, #ZQ0020), and HCCLM3 (catalog number, #ZQ0023) were provided by Zhong Qiao Xin Zhou Biotechnology (Shanghai, China). Dulbecco's modified Eagle's medium (DMEM; Gibco, USA) was used to culture the cells, supplemented with 10% fetal bovine serum (FBS; Gibco, USA) and 1% penicillin/streptomycin solution. Plasmids coding for CSNK1D (pTSB-CMV-CSNK1D-copGFP-F2A-PuroR) were designed and purchased from TransheepBio-Tech CO, LTD (Shanghai, China). To overexpress CSNK1D, HepG2 cells were transfected with OE-CSNK1D plasmids or control vector plasmids by Lipofectamine 3000(Invitrogen). Forty-eight hours later, 5 µg/ml of puromycin (Invitrogen) was added to the medium and maintained for another 14 days until the stably-transfected cell lines were established. The sequence of short hairpin RNA(ShRNA) with highest intervening efficacy targeting CSNK1D was CUAUCUCGGUACGGACAUUTTAAUGUCCGUACCGAGAUAGTT. The sequence of small interfering RNA (siRNA) with highest intervening efficacy targeting Dishevelled Segment Polarity Protein 3 (DVL3) was GCUCCCUUUCACCAUUUAUAUAAAUGGUGAAAGGGAGC.
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10

HCC Cell Lines and SMYD4 Manipulation

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Hepatocellular carcinoma (HCC) cell lines (Huh7, Hep3B) were obtained from the Cell Bank of Type Culture Collection of the Chinese Academy of Sciences. HCC cell lines (MHCC‐97H, SNU‐449) were purchased from Shanghai Zhong Qiao Xin Zhou Biotechnology (China). Among these cells, MHCC‐97H and SNU‐449 were used for SMYD4 knockdown experiments (Table S5), while Huh7 and Hep3B were used for SMYD4 overexpression experiments. All cells were maintained in DMEM (ThermoFisher Scientific) supplemented with 10% FBS (ThermoFisher Scientific) and 1% penicillin/streptomycin (ThermoFisher Scientific) and incubated at 37°C with 5% CO2. In each experiment, the cells were passaged at least three times after thawing. All cells were authenticated via short tandem repeat (STR) profiling conducted by a diverse company. All cells were confirmed to be free from mycoplasma every 3 months. In some experiments, JNJ‐64619178 (300 nmol/L, HY‐101564, MedChem Express) was utilized to treat HCC cells.
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