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10 protocols using anti cd71

1

Multiparameter B Cell Immunophenotyping

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Cells were stained in PBS-3%FCS for 30 min on ice with the following antibodies: anti-B220 (BD 553092), anti-CD25 (BD 553050), anti-IgM (Southern biotechnology 1140-02), anti-TER119 (BD 557915), anti-CD71 (BD 553267), anti-CD4 (BD 553729), anti-CD8 (BD 553032), and anti-hCD2t (R&D FAB 18561P). For cell sorting, the following antibody combinations were used: ProB cells, B220+, cKit+, CD25−, IgM−; large or small Pre B, B220+, cKit−, CD25+, IgM−; immature B, B220+, IgMlow; splenic mature B, B220+, IgMhigh. Cells were analyzed on a Becton Dickinson FACSCalibur or sorted on a Cytomation MoFlo instrument
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2

Multiparameter Immune Cell Profiling

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Anti-mouse ABs: anti-CD3e (clone: 145-2C11), anti-CD34 (clone: HM34), anti-CD45R (clone: RA3-6B2), anti-CD117 (c-KIT, clone: 2B8), anti-CD182 (CXCR2, clone: SA044G4), anti-CD184 (CXCR4, clone: L276F12), anti-Ly-6A/E (Sca-1, clone: D7), anti-Ki-67 (clone: 11F6), anti-Ly-6G (clone: 1A8), anti-NK-1.1 (clone: PK1), anti-mouse/human-CD11b (clone: M1/70) all from BioLegend (San Diego, CA, USA), and anti-CD16/32 (clone: 93) and anti-CD62L (clone: MEL-14) (both from eBioscience, Thermo Fisher Scientific, Waltham, MA, USA). Anti-human ABs: anti-CD66b (clone: 80H3, Beckman Coulter, Brea, CA, USA), and anti-CD71 (clone: M-A712, BD Biosciences, Franklin Lakes, NJ, USA). Viability dye eFluor780 and eFluor506 (eBioscience, Thermo Fisher Scientific, Waltham, MA, USA) or DAPI (BioLegend, San Diego, CA, USA) were used to determine viable cells.
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3

Erythropoiesis Monitoring and Apoptosis Assessment

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anti-CD36, anti-CD235 (GlyA), and anti-CD71 combined with anti-CD3, anti-CD11b, and anti-CD19 for lineage specificity (BD Pharmingen) were used to monitor erythropoiesis. Apoptosis was assessed by Annexin V-FITC Apoptosis Detection Kit and propidium iodide staining (BD Pharmingen). Subset analyses and sorting were performed on FACSCanto II and FACSAria III flow cytometers (BD Biosciences) equipped with FACSDiva software, and subsequent analysis was performed with FlowJo software (Tree Star Inc.). Although CD71 and CD235 expression traditionally define discrete stages of erythroid differentiation, CD71 marks TfR1 and thus would be a variable in studies of cellular iron uptake and heme-globin coordination. Therefore, we tracked CD36, a stable, well-characterized surrogate (Fig. 1A) (12 (link), 13 (link)). Cytoplasmic ROS was quantitated by CM-H2DCFDA, and mitochondrial ROS was quantitated by MitoSOX Red (Invitrogen/Molecular Probes). Isotype control and gating strategies are shown in fig. S8.
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4

Erythroid Progenitor Cell Analysis

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On day 8, 10, 12, 14 and 16 time points, non-adherent cells were collected and washed in IMDM. Cells were stained with cell surface antibodies, anti CD235a cat# 551336 (BDbiosciences, San Jose, CA, USA) and anti CD71 cat# 555537 (BDbiosciences, San Jose, CA, USA) for 30 min at 4 °C. Next cells were fixed and permeabilized with 200 ul of Cytospin/Cytoperm (BD Biosciences San Jose, CA) followed by intracellular staining using anti AHSP cat# sc515436 (Santa Cruz Biotechnology, Dallas, TX, USA) for 2 h at room temperature, and then with Hoechst 33342 nuclear stain cat# H3570 (Thermofisher Invitrogen, Waltham, MA) for 10 min at room temperature. Cells were then analyzed by flow cytometry using BD LSRFortessa and gated with FlowJo software.
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5

Assessing Erythroid Cell Proliferation

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Pregnant female mice at midgestation were injected with BrdU [200 μl of stock (10 mg/ml) in phosphate-buffered saline (PBS)] intraperitoneally. E13.5 embryos were harvested 30 min later. To determine DNA replication rate in vitro, cells were pulsed at a final concentration of 33 μM BrdU for 30 min. Cells were immediately labeled with the LIVE/DEAD Kit (Invitrogen L23105), fixed, and permeabilized. Erythroid subsets were identified using anti-CD71 (BD Biosciences 113812) and anti-Ter119 (BD Biosciences 553673). BrdU incorporation and DNA content were detected by biotin-conjugated anti-BrdU (Abcam ab171059), streptavidin-conjugated APC (Invitrogen S868), and 7AAD (BD Biosciences 559925).
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6

Immunophenotyping and Oxidative Stress Analysis

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For immunophenotyping, BM cells were stained using fluorescent label-conjugated anti-CD71, anti-ter119, anti-CD45, anti-CD11b, and anti-Gr-1 antibodies (BD Biosciences, San Jose, CA). For intracellular staining, NRF2 (D1Z9C) XP® Rabbit mAb (PE Conjugate) was used, following the technique provided by the manufacturer. For measure of oxidative stress, Total ROS/Superoxide detection kit was used (Enzo Life Sciences). The stained cells were analyzed by Accuri C6 flow cytometer and CFlow plus software (BD Biosciences, San Jose, CA).
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7

Cell Cycle Analysis via BrdU Incorporation

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Cell-cycle status and S phase speed were analyzed using BrdU incorporation26 (link). Briefly, cells were pulsed at a final concentration of 33 μM BrdU for 30 min. Cells were immediately labeled with the LIVE/DEAD Kit (Invitrogen L23105), fixed, and permeabilized. Erythroid subsets were identified using anti-CD71 (BD Biosciences 113812) and anti-Ter119 (BD Biosciences 553673). BrdU incorporation was measured by biotin-conjugated anti-BrdU (MOBU-1, BioLegend) followed by a secondary stain with Brilliant Violet 421™ Streptavidin (BioLegend). DNA content was measured by 7AAD (BD Biosciences).
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8

Erythroblast Immunophenotyping by Flow

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Expanded erythroblasts were labeled with anti-CD71 (FITC), 235a (PE), 36 (FITC) and 117 (PE), (BD Biosciences, East Rutherford, New Jersey, U.S.). Cells were acquired in BD FACSCalibur™ flow cytometer and viable 7-AAD (BD Biosciences) negative cells were analyzed in FlowJo V10 software (BD Biosciences).
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9

Immunophenotyping of Cell Surface Receptors

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Antibody staining was done on ice. Cells were washed once with PBS/1% FCS and afterwards incubated for 30 minutes in a total volume of 100 μl with the respective recommended amount of antibody. Following antibodies were used in our study: anti-CD71 (BDPharmingen; M-A712; APC), anti-CD28 (BDPharmingen; L293; PE), anti-HFE (Abnova; polyclonal), anti-CD3 (Caltag; UCHT1; APC), anti-CD4 antidody (Caltag; RPA-T4; APC), anti-HLA-ABC (Dako; W6/32; PE). Post staining cells were washed twice and fixed with 2% PFA/PBS. At least 2.000 infected cells were measured with a FACS Canto II (BDBioscience). Fold modulation of cell surface receptor modulation was calculated as before [14 (link),51 (link)]. Flow cytometric measurement of FRET and the according gating strategy were performed as already described [24 (link)]. Cellular iron content was measured by the use of the fluorescent dye CA-AM which is quenched by free cellular iron [4 (link)].
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10

Quantifying Receptor Internalization Using Biotinylation

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Internalisation assays were performed as described in Roberts et al., 2001 (link). Briefly, cells were surface labelled at 4°C with 0.13 mg/mL NHS-SS-biotin (Pierce) in PBS for 30 min. Following surface labelling, cells were transferred to complete medium at 37°C to allow internalisation in the presence of 0.6 mM primaquine for the indicated times. Biotin was then removed from the cell surface by treatment with the cell-impermeable-reducing agent MesNa. Cells were then lysed and the quantity of biotinylated receptors determined using a capture-ELISA. The following antibodies were used for capture-ELISA: clone VC5 (BDPharmingen, Cat# 555651) for α5β1, anti-CD71 (BDPharmingen, Cat# 555534) for the TfnR, anti-HGFR (R&D Systems, Cat# AF276), and anti-EGFR1 (BDPharmingen, Cat# 555996).
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