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Thermo q exactive hybrid quadrupole orbitrap mass spectrometer

Manufactured by Thermo Fisher Scientific

The Thermo Q Exactive Hybrid Quadrupole-Orbitrap Mass Spectrometer is a high-resolution, accurate-mass (HRAM) mass spectrometer that combines a quadrupole mass filter and an Orbitrap mass analyzer. It is designed to provide high-performance MS and MS/MS capabilities for a wide range of analytical applications.

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2 protocols using thermo q exactive hybrid quadrupole orbitrap mass spectrometer

1

LC-FTMS Metabolomics Data Analysis

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Samples were analyzed by LC-FTMS, as previously described [3 (link)]. m/z features were collected by a Thermo Q Exactive Hybrid Quadrupole-Orbitrap Mass Spectrometer (Thermo Fisher, San Diego, CA) from m/z 85 to 1275 over 10 min. Peak extraction, noise removal, and quantification of ion intensities were performed by an adaptive processing software package (apLCMS) with xMSanalyzer designed for use with LC-FTMS data [34 (link)]. For clarification, data extracted on m/z features, which are not definitively identified metabolites, will be referred to as “features” and not metabolites. See Additional file 2.
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2

Liver Metabolite Analysis by LC-MS

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Liver samples were minced and extracted in 0.4N perchloric acid. The 1C cycle metabolites in the liver homogenates were detected by liquid chromatography–mass spectrometry (LC–MS) analysis on a Sciex 5500 QTrap with Agilent 1200 LC (AB Sciex.) for SAM and SAH, and a Thermo Q-Exactive Hybrid Quadrupole-Orbitrap Mass Spectrometer with an Ultimate 3000 HPLC (Thermo Fisher Scientific) for PE and PC. Liver TG levels were measured using a Serum Triglyceride Determination Kit (TR0100, Sigma-Aldrich).
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