The largest database of trusted experimental protocols

5 protocols using calcein am

1

HUVEC Survival Assay on polyHEMA Coated Plates

Check if the same lab product or an alternative is used in the 5 most similar protocols
At 24 hpt, HUVECs were harvested and counted. Cells (5x104 cells/well) were seeded in 1 ml of medium on a poly hydroxyethyl methacrylic acid (polyHEMA) coated 24-well plate (final density ≈1.3 mg of polyHEMA per cm2) and in a 24-well plate control. After 24 and 48 hours (48 and 72 hpt), cells were harvested and concentrated by centrifugation. Cell pellets were re-suspended in 100 μl of fresh medium and stained with calcein AM (Invitrogen) or WST-1 (Roche), according to the manufacturer’s instructions. After an hour, relative fluorescence units (RFU) for calcein AM (excitation/emission: 495/515 nm) or absorbance (A450-A650 nm) for WST-1 were read with a Modulus microplate reader (Promega). Results were presented as RFU or absorbance measurements in the polyHEMA-coated wells normalized to the control well, relative to mock-infected or negative-control mi/siRNA-transfected well.
+ Open protocol
+ Expand
2

Cytotoxicity Assay of NK Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cytotoxicity of NK cells was assessed by lysis of K562 target cells, loaded with the
fluorescent dye calcein-AM (Life Technologies, Paisley, United Kingdom). K562 cells
were incubated and loaded with 10 µM calcein-AM for 30 min at
37°C, before washing in K562 maintenance media and serum-free media for 15
min. K562 cells and freshly isolated dNK cells or PB NK cells were cocultured in
serum-free dNK culture media in V-bottom, 96-well plates (Corning Life Sciences, The
Netherlands) for 4 h at ratios of 1:1–20:1 E:T. calcein-AM released into the
supernatant was assessed by use of a GloMax-Multi+ microplate spectrofluorimeter
(Promega, Southampton, United Kingdom) with excitation filter 485 and emission filter
530. Data are expressed as fold lysis over control, containing no NK cells but
matched numbers of target cells.
+ Open protocol
+ Expand
3

Quantifying Follicle Density in Ovarian Biopsies

Check if the same lab product or an alternative is used in the 5 most similar protocols
To evaluate the follicle density (FD) and to reduce heterogeneity, two 3mm biopsies (January 2018 to August 2018) or four 2mm biopsies (September 2018 to April 2020) from different cortex areas were collected for each patient [10 (link)]. Cortical biopsies were then incubated in a 5 % CO2 incubator at 37℃ for 2 hours in 0.8 mg/ml collagenase Type 1A (Sigma-Aldrich Chemie GmbH, Munich, Germany) supplemented with 0.2 % calcein-AM (Promega GmbH, Mannheim, Germany) and DPBS (Gibco by Life Technologies, Paisley, UK) for digestion and staining. After pipetting and placing at room temperature for 30 minutes, follicles descended to the bottom of the well so that FD could be measured by fluorescence and light microscopy. Primordial or primary follicles were identified by a single layer of flattened or cuboidal granulosa cells (GCs) [19 (link)]. Secondary preantral follicles were identified by two or more layers of GCs, as well as the absence of antrum [20 (link)]. The meander-shaped counting method was used to determine the number of follicles in each well [10 (link)]. To reduce the bias, follicles were blindly counted by two independent observers. Then we calculated the FD for every patient to make values comparable, converting the follicle numbers in 2 × 3mm or 4 × 2mm biopsies to the volume of one 3mm biopsy.
+ Open protocol
+ Expand
4

Evaluating Cell Viability and Proliferation

Check if the same lab product or an alternative is used in the 5 most similar protocols
BeWo cells were incubated with Calcein AM (Thermo Scientific; C1430; 1:200) and Ethidium homodimer-1 (Thermo Scientific; E1169; 1:200) and imaged using an Eclipse Ti-E Inverted Fluorescence Microscope (Nikon). Green fluorescence indicated live cells and red fluorescence indicated dead cells. Images were analyzed using Fiji (National Institutes of Health) and NIS Elements software (Nikon), and the percentage ratio of live to dead cells were calculated by dividing the mean intensity of live cells (as determined by fluorescence of Calcein AM stain) by the mean intensity of the dead cells (as determined by fluorescence of Ethidium homodimer-1 stain).
Cell proliferation was determined using a CellTiter 96® AQueous Non-Radioactive Cell Proliferation Assay kit (MTS Assay; Promega). The absorbance was measured at 490 nm on a Multiskan® Spectrum spectrophotometer (Thermo Scientific). Given that the absorbance is directly proportional to the number of live cells, relative rate of cell proliferation was determined by calculating the fold change in absorbance compared to the 2D control. Matrigel samples with no cells seeded were used to correct for any potential background absorbance.
+ Open protocol
+ Expand
5

Assessing Cell Viability in Alginate Discs

Check if the same lab product or an alternative is used in the 5 most similar protocols
At culture days 1, 3, and 7 alginate discs were incubated with a solution of calcein-AM (Promega) for 20 min, followed by 5 min incubation with propidium iodide (Sigma). Discs were rinsed in culture medium twice to wash any excess of calcein-AM and propidium iodide and finally observed under the confocal microscope.
For flow cytometry analysis, cells were firstly incubated with a 6 μM solution of propidium iodide (PI, Sigma-Aldrich) for 10 min at 37°C. Cells were further extracted from the alginate disks using trypsin-EDTA and transferred to 96-well round bottom plates and washed with 150 μL of FACS Buffer (2% FBS in PBS 1X) by centrifuging for 3 min, 244 g at RT. For data acquisition, cells were suspended in 150 μL of FACS Buffer and analyzed on a BD FACS Canto II cytometer using 530/30 and 670/LP optical filters. The cell population of interest was gated according to forward (FSC), side scatter (SSC) and fluorescence parameters using untreated cells. Doublets were excluded with FSC-peak (height) vs. FSC-integral (area) gating. A total of 20 000 events were acquired per sample. Data was analyzed using FlowJo software version vX.0.7.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!