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Cell energy phenotype test kit

Manufactured by Agilent Technologies
Sourced in United States

The Cell Energy Phenotype Test Kit is a laboratory equipment product designed to measure cellular energy metabolism. It provides quantitative data on key parameters related to cellular respiration and glycolysis, enabling researchers to assess the energy phenotype of cells. The kit includes necessary reagents, protocols, and supporting software to perform the analysis.

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14 protocols using cell energy phenotype test kit

1

Metabolic Profiling of Activated T Cells

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Extracellular acidification rate (ECAR) and oxygen consumption rates (OCR) were measured using a XF24 3 Extracellular Flux Analyzer (Seahorse). 0.5 x 106 CD8+ T cells per well were plated on poly-D-lysine coated plates, in XF media (non-buffered RPMI base medium, 25mM glucose, 2mM glutamine and 1 mM sodium pyruvate). Assays were performed with a Seahorse Cell Energy Phenotype Test Kit, and ECAR and OCR were measured simultaneously before and after injection of Olygomycin (1 μM) and FCCP (1 μM). For experiments performed under 1% O2, the XF24 3 analyzer was placed inside a hypoxic globe box (Coy).
Glucose and lactate levels were determined with a Dade-Behring Dimension RXL autoanalyser (Siemens). VEGF-A levels in media were measured with a VEGF-A immunoassay kit (MSD). Protein levels were normalized to viable cell counts performed on an ADAM-MC automated cell counter (NanoEnTek). T cell proliferation was measured by CFSE dilution assay 72 hours after T cell activation with plate-bound αCD3 (5 μg/ml, Biolegend) and soluble αCD28 (1μg/ml, Biolegend).
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2

Glycolytic Metabolism Profiling of siPHGDH-Stimulated Cells

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The modalities of glucose metabolism in cells stimulated or not by siPHGDH for 72 h were explored using the Seahorse XF96 extracellular flux analyzer in combination with the XF glycolysis stress kit and cell energy phenotype test kit (Seahorse Biosciences, MA) according to the manufacturer's instruction.
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3

Extracellular Flux Analysis of Cellular Metabolism

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Metabolic analysis was performed as a real-time measurement through extracellular flux analysis with XFp extracellular flux analyzer (Agilent Seahorse Technologies, Santa Clara, CA, USA). The oxygen consumption rate (OCR) and extracellular acidification rate (ECAR) were measured with XFp flux analyzer through application of the cell energy phenotype test kit (Agilent Seahorse Technologies) according to the manufacturer’s instructions. As metabolic inhibitors, the ATP synthase inhibitor oligomycin (1 µM) was used as a co-injection with trifluoromethoxy carbonylcyanide phenylhydrazone (FCCP), (1 µM) after 3 basal measurement points. BeWo were plated in XFp miniplates at a density of 0.5 to 1 × 104 cells per well. Measurements were performed in biological and experimental triplicates. A medium change prior to measurement was conducted with XF DMEM (#103575-100, Agilent Seahorse Technologies) under the addition of 10 mM glucose, 1 mM sodium pyruvate and 2 mM L-glutamine. Normalization of OCR and ECAR values was performed through total protein content determined as optical density (OD) by Bradford assay.
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4

Comprehensive Metabolic Profiling Protocol

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TIANamp Genomic DNA Kit (Cat. DP304) was from Tiangen. SYBR Green PCR Master Mix (2×) (Cat.4913914001) was from Roche. Recombinant mouse M-CSF (Cat. 415-ML) and GM-CSF (Cat. 416-ML) were purchased from R&D Systems. Glycolytic Rate Assay Kit (Cat. 103346-100), XF cell Mito Stress Test Kit (Cat. 103010-100) and Cell Energy Phenotype Test Kit (Cat. 103275-100) were from Agilent. Glucose Assay Kit (Cat. AB169559), Citrulline Fluorometric Assay Kit (Cat. AB273309), Ornithine Fluorometric Assay Kit (Cat. AB252903), and Adipogenesis Colorimetric/Fluorometric Assay Kit (Cat. AB102513) were form Abcam. Nitric Oxide Assay Kit (Cat. S0021S), Nitric Oxide Synthase Assay Kit (Cat. S0025) and Mito-Tracker Green (Cat. C1048) was from Beyotime. Bis Benzimide Hoechst NO33342 (Cat. B8040) was from Solarbio. Arginase Activity Assay Kit (Cat. MAK112) was from Sigma-Aldrich.
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5

Immunofluorescence and Flow Cytometry Analysis of mTOR Signaling

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Haloperidol, risperidone, and aripiprazole were acquired from Sigma Aldrich (Sigma Aldrich, St. Louis, MO, USA) and dissolved in DMSO per manufacturer’s instructions. iNOS (Thermo Fisher Scientific, Waltham, MA, USA) and CD206 (BioRad, Hercules, CA, USA) monoclonal antibodies were used for immunofluorescence. Secondary antibodies used were Alexa 488 goat α-mouse IgG1, Alexa 488 and 555 goat α-rat IgG2a and Alexa 555 goat α-rabbit secondary reagents (Thermo Fisher Scientific, Waltham, MA, USA). The antibodies used in flow cytometry analysis were anti-CD86-PE (BD Biosciences, San Jose, CA, USA, SAD) and anti-CD16/32-FITC (BD Biosciences, San Jose, CA, USA, SAD). mTOR signaling was assessed with anti-phospho-p70S6K and anti-p70S6K antibodies (Cell Signaling Technologies, Danvers, MA, USA), while anti β-Actin (Sigma Aldrich, St. Louis, MO, USA) was used as a loading control. Secondary antibody for Western blot analysis was HRP conjugated goat α-rabbit (Cell Signaling Technologies, Danvers, MA, USA). Real-time metabolism assay was performed using IFN-γ (Genentech, San Francisco, CA, USA), LPS (Sigma Aldrich, St. Louis, MO, USA) and FCCP/Oligomycin as part of the Cell Energy Phenotype Test Kit (Agilent, Santa Clara, CA, USA).
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6

Naltrexone Effects on Macrophage Phenotypes

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Naltrexone hydrochloride (Sigma Aldrich, St. Louis, MO, USA) (−)- naltrexone stereoisomer was used for all experiments and dissolved in purified H2O as per the manufacturer’s instructions. Tested concentrations for Naltrexone hydrochloride were 50 μM, 100 μM, 250 μM, 500 μM and 1000 μM. For immunofluorescence, we used iNOS (Thermo Fisher Scientific, Waltham, MA, USA) and CD206 (BioRad, Hercules, CA, USA) monoclonal antibodies. Secondary antibodies used were Alexa 488 goat anti-mouse IgG1, Alexa 488 and 555 goat anti-rat IgG2a and Alexa 555 goat anti-rabbit secondary reagents (all from Thermo Fisher Scientific, Waltham, MA, USA). The blue-fluorescent DNA stain DAPI was used for nuclear staining (Thermo Fisher Scientific, Waltham, MA, USA). mTOR signalling was assessed using anti-phospho-p70S6K and anti-p70S6K antibodies (Cell Signalling Technologies, MA, USA), while anti β-Actin (Sigma Aldrich, St. Louis, MO, USA) was used for protein loading control. The secondary antibody for Western blot analysis was HRP conjugated goat anti-rabbit (Cell Signalling Technologies, MA, USA). Real-time metabolism assay was performed using IFN-γ (Genentech, San Francisco, CA, USA), LPS (Sigma Aldrich, St. Louis, MO, USA) and FCCP/Oligomycin as part of the Cell Energy Phenotype Test Kit (Agilent, Santa Clara, CA, USA).
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7

Seahorse Analyzer Bioenergetics Profiling

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A seahorse Bioscience XF96 extracellular flux analyzer is utilized to measure oxygen consumption rates (OCR) and extracellular acidification rates (ECAR) in both CTSC-LIN and CTSC-GFP using the mito stress and glycolysis stress kit (Agilent Technologies) respectively. Cell energy phenotype is assessed using the cell energy phenotype test kit (Agilent Technologies) using a seahorse bioanalyzer.
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8

HUVEC Metabolic Phenotype Profiling

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ECAR and OCR were measured using the Seahorse XFe96 analyzer (Agilent) with Cell Energy Phenotype Test Kit. The day before, 10,000 HUVECs/well from each treatment were seeded in a gelatin-precoated 96-well plate and cultured in EBM with the corresponding glucose concentration at 37°C, 5% CO2, and 8% O2. On assay day, cells were washed with 200 μl assay medium (Seahorse XF Base Medium with 1 mM pyruvate, 2 mM glutamine, and 10 mM glucose) and incubated in 180 μl of fresh assay medium for 1 h at 37°C before the assay. The Cell Energy Phenotype Test consists of three baseline measurements of OCR and ECAR followed by five stressed measurements. The latter are induced by the simultaneous addition of oligomycin, a complex V inhibitor, and carbonyl cyanide-p-trifluoromethoxyphenylhydrazone (FCCP), an uncoupling agent. Oligomycin and FCCP were added to each well to a final concentration of 1 mM and 0.5 mM, respectively. Results were analyzed with Agilent’s Wave software and normalized to cell number. The cell number of each well was determined by adding Hoechst to a final concentration of 2 μM. Then, nuclei were counted using BioTek Cytation 1 Cell Imaging Multimode Reader. Nine biological replicates were used per condition, each one with multiple technical replicates.
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9

Evaluating Metabolic Phenotypes in RAW 264.7 Cells

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The glycolytic capacity (ECAR) or oxygen consumption (OCR) was evaluated in RAW 264.7 cells (5×103 cells/well) in response to control (PBS) or IL-34 treatment using the Cell Energy Phenotype Test kit (Agilent Technologies) as per the manufacturer’s instructions. Cells were pre-conditioned with the stimuli for in 0% FBS/DMEM, for 24h before ECAR and OCR assessment.
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10

Glycolytic Capacity and Oxygen Consumption in Activated Macrophages

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The concentration of LPS/IFNγ and the dose of 2-DG or IACS were titrated in RAW cells using Seahorse assay. We tested the glycolytic capacity and oxygen consumption of control and (1000ng/ml each) LPS/IFNγ-stimulated RAW 264.7 cells (5×103 cells/well) in presence of 2-DG (10mM) or IACS (1000nM) using the Cell Energy Phenotype Test Kit (103325–100; Agilent Technologies) as per manufacturer’s instructions [53 ,54 ]. Cells were pre-conditioned with the inhibitors and stimuli in 0% FBS/DMEM for 24h before ECAR and OCR evaluation.
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