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9 protocols using stat3

1

Protein Expression Analysis by Immunoblotting

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Protein expression levels were assessed by immunoblot analysis of cell lysates (20–50 μg protein) in RIPA buffer containing 1× phosphate-buffered saline (PBS), 1% Nonidet P-40, 0.1% sodium dodecyl sulfate (SDS), 5 mM EDTA, 0.5% sodium deoxycholate, 1 mM sodium orthovanadate, and protease inhibitors. Primary antibodies to CD133 (11,000, Proteintech, CA, USA), SOX2 (1:1000, Proteintech), Nanog (1:1000, Proteintech), β-Actin (1500, Zsbio, Beijing, CHN), PRRX1 (11,000, Abcam, USA), STAT3 (11,000, Affinity, UK), p-STAT3 (11,000, Affinity), and CXCR4 (11,000, Proteintech) were used.
For co-IP assays, cells were transiently or stably transfected with the indicated constructs. The cells were harvested and lysed in 1 ml of lysis buffer (50 mM HEPES pH 7.5, 150 mM NaCl, 1 mM EDTA, 0.5% Nonidet P-40). The resulting lysates were subjected to immunoprecipitation with antibodies directed to the epitope tag. Immunoprecipitates were washed in lysis buffer, resolved by SDS-polyacrylamide gel electrophoresis, and subsequently analysed by protein immunoblotting.
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2

Western Blot Analysis of Immune Signaling

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Protein samples were obtained from macrophages and glioblastoma cells. The processes of Western blot were consistent with previously reported [20 (link)]. Immunoreactions were visualized with a GeneGnome XRQ Imaging System (Syngene, UK). Primary antibodies utilized in our research were as follows: STAT3 (AF6294, Affinity), p-STAT3(YP0251, Immunoway), STAT1 (YT4439, Immunoway), p-STAT1 (YP0249, Immunoway), SIRPα (YT4301, Immunoway), CD47 (YT5509, Immunoway), β-actin (TA-09, ZSGB-BIO), and GAPDH (BA2913, BOSTER).
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3

Mesenchymal Stem Cell Differentiation

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Sal B was purchased from Maclean’s Biochemistry (China), dissolved in DMSO, and stored in the refrigerator at −80°C before use, The annexin V/FITC apoptosis kit was purchased from KGI (China), fetal bovine serum was purchased from Clark Bioscience (United States), DMEM/F12 was purchased from Biosharp (China), HAMA-400K hydrogel was purchased from Suzhou Yongqinquan Intelligent Equipment Co., Ltd. (China), CD105-APC purchased from EXBIO (Czech Republic), CD34-FITC antibody was purchased from Santa Cruz Biotechnology (United States), CD45-PE was purchased from Invitrogen (United States), CD90-FITC was purchased from Biolegend. JAK2, p-JAK2, STAT3, p-STAT3, BAX, and Bcl2 antibodies were purchased from Affinity Biosciences (China), DAPI and FITC-labeled ghost cyclic peptides were purchased from Sloarbio (China), and the Calcein-AM/PI Double Stain Kit was purchased from Yeasen Biotechnology (China), Sprague-Dawley (SD) rat bone marrow MSC osteogenesis, adipogenesis, and chondrogenesis differentiation kits were purchased from Cyagen Biotech (China).
The SD rats used in this experiment were purchased from Hunan Sleek Jingda Laboratory Animal Co., Ltd. (license number SCXK (Xiang) 2019-0004) and approved by the Ethics Committee of Bengbu Medical College (approval number: Lunde Keji [2020] No. 198).
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4

Western Blotting Analysis of EMT Markers

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Total proteins were harvested from cultured cells as described previously 11 . Proteins were separated by 10% SDS-polyacrylamide gel electrophoresis and then transferred to PVDF membranes. 5% nonfat milk was used to block the membrane. After that, the membrane was incubated with primary antibodies against USP5 (1:1000 Proteintech Wuhan Sanying, Wuhan, China), actin (1:5000, Santa Cruz Biotechnology, lnc., Dallas, TX, U.S.A.), STAT3 (1:1000, Affinity, Changzhou, China), pSTAT3 (1:500, Affinity, Changzhou, China) and other EMT markers (N-cadherin, 1:1000, Proteintech Wuhan Sanying, Wuhan, China, vimentin, 1:1000, Arigo, Taiwan, China, β-catenin, 1:1000, Arigo, Taiwan, China), followed by horseradish peroxidase (HRP)-conjugated secondary antibodies (1:5000 Proteintech Wuhan Sanying, Wuhan, China). Immunoreactive proteins were detected using a chemiluminescence solution (Thermo fisher Scientific).
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5

Immunoblotting Analysis of Neuronal Proteins

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Total proteins from cells and hippocampal tissues of mice were extracted and the protein content was determined. Samples were separated by dodecyl sulfate‐polyacrylamide gel electrophoresis (SDS‐PAGE) and electrotransferred to polyvinylidene fluoride (PVDF) membranes (Millipore, Burlington, MA, USA). The membranes were blocked with 5% skim milk at room temperature for 2 hr and incubated at 4°C overnight with the primary antibodies (BDNF 1:1,000, Zen, China) (JAK2 1:1,000, STAT3 1:1,000, p‐STAT3 1:1,000, β‐actin 1:10,000, Affinity, USA) (p‐JAK2 1:1,000, Boster, China) (TERT 1:500, Novus, USA). Then, the membranes were washed and incubated with the horseradish peroxidase‐secondary antibody (goat anti‐rabbit IgG 1:10,000, goat anti‐mouse IgG 1:10,000) at room temperature for 1.5 hr. Protein signals were detected using enhanced chemiluminescence reagents (Millipore, Burlington, MA, USA). Images were acquired by a BioSpectrum version 810 imaging system (UVP) and analyzed using the Quantity One software.
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6

Western Blot Analysis of Cell Signaling Pathways

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RIPA lysis buffer (with 1% phenylmethanesulfonyl fluoride) (Beyotime, Shanghai, China) was used to lyse the cells. After determination of protein concentration with a BCA protein concentration determination kit (Beyotime), the protein samples were subjected to sodium dodecyl sulfate-polyacrylamide gel electrophoresis followed by transferation onto polyvinylidene fluoride membranes (ThermoFisher). Following blocking with 5% bovine serum albumin, the membranes were incubated with antibodies against NR1D1 (1:1000; Abclonal, Wuhan, China), cyclinD (1:1000; ABclonal), cyclinE (1:1000; Proteintech, Wuhan, China), SOCS3 (1:1000; ABclonal), JAK-1 (1:1000; Affinity, Changzhou, China), p-JAK1 (Tyr 1034/Tyr 1035; 1:1000; Affinity), JAK2 (1:500; Affinity), p-JAK2 (Tyr 1007/Tyr 1008, 1:1000; Affinity), STAT3 (1:500; Affinity), p-STAT3 (Tyr 705, 1:500; Affinity), β-actin (1:2000; Proteintech) at 4 °C overnight. Thereafter, the membranes were incubated with horseradish peroxidase-labeled secondary antibodies (1:10000; Proteintech) at 37 °C for 40 min. Blots were visualized with an enhanced chemiluminescence substrate kit (7 Sea biotech, Shanghai, China).
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7

Byakangelicin and Silibinin Modulate Liver Fibrosis

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Byakangelicin (purity ≥ 98.5%) was obtained from Push Bio‐technology Co., Ltd. Silibinin (purity > 97%) was obtained from Meilunbio Co., Ltd. Olive oil and carbon tetrachloride were obtained from Shanghai Macklin Biochemical Co., Ltd. byakangelicin was dissolved in dimethylsulphoxide (DMSO) from Sigma‐Aldrich Corporation for cell experiment. Recombinant human PDGF‐BB was obtained from R&D system. Recombinant Human TGF‐β1 was obtained from PeproTtech. Primary antibodies including anti‐α‐smooth muscle actin (α‐SMA), anti‐collagen Ⅰ (COL‐1), anti‐GAPDH and anti‐p‐Stat3, Stat3, β‐tubulin, cyclin D1, P53, p‐ASK‐1, ASK‐1, IL‐1β, NF‐κB and Nrf‐2 were acquired from Affinity Biosciences; anti‐p‐Smad3, Smad3, p‐PDGFR, PDGFR, p‐ERK, ERK, p‐AKT, AKT, PARP, cleaved caspase‐3 and caspase‐3 were received from (Cell Signaling Technology); anti‐p‐JNK, JNK from Signalway Antibody LLC; and anti‐4‐HNE from Abcam. Reagents and antibodies are prepared according to the instructions.
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8

Osteoblast Protein Expression Analysis

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Osteoblast cells were seeded into six-well plates at a density of 1 × 106 cells/well. After stimulation was complete, cells were treated with RIPA lysis buffer (Bioteke) with 1 mm phenylmethylsulfonyl fluoride (PMSF) (Solarbio), 1% phosphatase inhibitors (Roche, Basel, Switzerland), and 1% proteinase inhibitor (Roche) for 30 min on ice. Cell lysates were resolved using 8–15% sodium dodecyl-sulfate polyacrylamide gel electrophoresis followed by transfer to polyvinylidene fluoride (PVDF) membranes. Membranes were then blocked with skim milk (Solarbio) at room temperature for 1 h and then incubated with the appropriate primary antibodies against RANKL, GAPDH, p-GP130, p-STAT3, STAT3, p-JAK2, or JAK2 (Affinity, USA) on an orbital shaker at 4°C overnight. Then, membranes were washed (5 min, three times) with tris-buffered saline with 0.1% Tween and incubated for 1 h with horseradish peroxidase-conjugated secondary antibodies diluted 1: 6,000. After washing (5 min, three times), membranes were incubated with an enhanced chemiluminescence reagent (Affinity), and the chemiluminescent signals were visualized using an iBright CL1000 imaging system (Thermo, MA, USA). The semiquantitative analysis was performed using ImageJ v1.8.0 (NIH, MD, USA).
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9

Western Blot Protein Quantification

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Protein concentrations were measured using a BCA Protein Assay Kit (Pierce, Rockford, IL, USA). Equal amounts of proteins (20 µg) were separated by 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis and then transferred to polyvinylidene difluoride membranes (Bio-Rad Laboratories Inc., Hercules, CA, USA). The membranes were blocked by incubation in Tris-buffered saline with Tween 20 (25 mM Tris, pH 7.4, 150 mM NaCl, 0.1% Tween 20) containing 5% fat free milk for 1 hour at room temperature and were then immunoblotted with primary antibodies against RECK (R&D Systems, Inc., Minneapolis, MN, USA), AKT, p-AKT (Ser473), ERK, p-ERK (Cell Signaling Technology, Danvers, MA, USA), pSTAT3, STAT3, and β-actin (Affinity, Ossipee, NH, USA), followed by incubation with HRP-conjugated secondary antibodies (Santa Cruz Biotechnology Inc., Dallas, TX, USA). Blots were detected using an enhanced chemiluminescence detection system (Pierce).
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