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5 protocols using ab76247

1

STK10 and Cytoskeletal Protein Analysis

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HeLa and Caski cell lysates were prepared using RIPA buffer [1% Nonidet P-40, 0.5% sodium deoxycholate, 0.1% SDS in phosphate-buffered saline (PBS)] with freshly supplemented protease inhibitors cocktail (Roche). Next, the protein concentration was assayed by BCA (bicinchoninic acid) method, and 30 µg protein was separated on 10% SDS-PAGE membranes. Standard protocols were used for electrophoresis and immunoblotting analyses. Membranes were blocked with 5% milk in PBS. An anti-STK10 antibody (abcam, ab70484), anti-GAPDH rabbit polyclonal antibody (BBI, D110016), recombinant anti-ezrin antibody (abcam, ab40839), recombinant anti-moesin antibody (abcam, ab52490), recombinant anti-radixin antibody (abcam, ab52495) and Anti-ezrin (pThr567)/radixin (pThr564)/moesin (pThr558) antibody (abcam, ab76247) were used as the primary antibodies. The membranes were then incubated with IRDyeCW800-conjugated anti-rabbit immunoglobulin (LI-COR) and scanned with the LI-COR Odyssey imaging system (LI-COR).
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2

RNA-Protein Interaction Analysis via RIP

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RNA immunoprecipitation (RIP) was conducted with Magna RIP Kit (Millipore, Billerica, MA, United States) following the manufacturer’s instruments. U251 cell lysate was incubated with magnetic beads which were conjugated with anti-p-Ezrin(T567) (ab76247, Abcam), anti-Ezrin (ab40839, Abcam), or positive control anti-SNRNP70 and negative control anti-IgG antibody (Millipore, MA, United States) at 4°C for 6 h. The beads were washed. Then, immunoprecipitated RNA and protein were purified and enriched to detect the target RNAs and proteins by qRT-PCR and Western blot.
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3

Immunofluorescence Staining of Autophagy and Cytoskeletal Markers

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Cells were fixed onto slides using 4% formaldehyde solution for 12 minutes at room temperature, washed with phosphate buffered saline (PBS) solution three times, and blocked with 5% bovine serum albumin (BSA) solution. Slides were then incubated with antibodies targeting LC3 (ab243506, Abcam), FUT4 (ab212396, Abcam), and p-ezrin (ab76247, Abcam) overnight at 4 °C. After washing in PBS solution, slides were incubated in the dark with the secondary antibodies (goat anti-rabbit IgG H&L (FITC), ab6717, Abcam; goat polyclonal secondary antibody to mouse IgG-H&L (Alexa Fluor® 647), ab150115, Abcam) for 1–2 hours. The cell nuclei stained with 4',6-diamidino-2-phenylindole (DAPI) and slides were mounted with the Prolong Gold Antifade Reagent (CST). The fluorescence intensities were evaluated by observation under fluorescence microscopy.
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Western Blot Analysis of Autophagy and EMT Markers

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Total protein was extracted from the treated cells and tumor tissues using ice-cold lysis buffer (Beyotime, China). Proteins samples were then resolved by polyacrylamide gel electrophoresis (PAGE) and transferred to polyvinylidene fluoride (PVDF) membranes. Membranes were then blocked, followed by probing with primary antibodies against ATG5 (ab108327, Abcam), microtubule-associated protein 1A/1B-light chain 3 (LC3; ab51520, Abcam), bECLin-1 (ab207612, Abcam), p62 (ab109012, Abcam), FUT4 (ab231561, Abcam), p-ezrin (ab76247, Abcam), tumor growth factor (TGF)-β1 (ab215715, Abcam), N-cadherin (N-cad; ab18203, Abcam), E-cadherin (E-cad; ab40772, Abcam), vimentin (ab92547, Abcam), Snail (ab216347, Abcam), Slug (ab106077, Abcam), or GAPDH (ab181602, Abcam) at room temperature for 3 hours. Membranes were then washed, followed by incubation with the second antibody (ab6721, Abcam). Protein expression was observed using enhanced chemiluminescence (ECL, Millipore, USA).
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5

Protein Extraction and Immunoblotting Analysis

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The extracted proteins (nuclear proteins, cytoplasmic proteins and nuclear membrane proteins) were separated by SDS‐PAGE on 10–12% polyacrylamide gels and stained with Coomassie blue. The following primary antibodies were used: anti‐H3 (Abcam, ab1791, 1:1000), anti‐CD63 (Abcam, ab271286, 1:1000), anti‐MPO (Abcam, ab208670, 1:1000), anti‐NE (Abcam, ab131260, 1:1000), anti‐laminB1 (Abcam, ab16048, 1:1000), and anti‐syntaxin4 (Abcam, ab184545, 1:1000), Anti‐CD44 (Abcam, ab189524, 1:1000), anti‐CD44 (Abcam, ab232556, 1:1000), anti‐ERM(Abcam, ab76247, 1:1000) and anti‐pERM(CST, 1:500).
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