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Ctr 7000 hs controller

Manufactured by Leica

The CTR/7000 HS controller is a device designed to control laboratory equipment. It serves as a central interface for managing and monitoring various laboratory instruments and systems. The core function of the CTR/7000 HS is to provide a user-friendly platform for controlling and coordinating the operation of connected laboratory equipment.

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10 protocols using ctr 7000 hs controller

1

Immunofluorescence Analysis of Salmonella Infection

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NRK-49F fibroblasts were seeded on coverslips to a confluence of 50–60% in 24-well plates and infected with wild-type, ∆mrdA and ∆PBP2SAL strains. Infected cells were fixed at 2, 4, 8 and 24 hpi in 3% PFA (15 min, RT), and processed for immunofluorescence microscopy, as described70 (link). Briefly, after PFA fixation, the infected cells were washed in PBS pH 7.4 and incubated for 10 min at RT in blocking solution containing 0.1% (w/v) saponin and 1% (v/v) goat serum. Incubations with primary and secondary antibodies were performed in this same solution of 0.1% (w/v) saponin and 1% (v/v) goat serum during 45 min each, with three washes in PBS pH 7.4 after the respective incubations. Coverslips were finally mounted on slides using ProLong Gold Antifade (Molecular Probes). Rabbit polyclonal anti-S. Typhimurium LPS (cat. no. 229481, 1:1000, Difco Antiserum-BD Diagnostics, Sparks, MD) and goat polyclonal anti-rabbit IgG conjugated to Alexa 488 (1:1000, cat. no. A-11008, ThermoFisher Scientific), were used as primary secondary antibodies, respectively. Images were acquired on an inverted Leica DMI 6000B fluorescence microscope with an automated CTR/7000 HS controller (Leica Microsystems) and an Orca-R2 charge-coupled-device (CCD) camera (Hamamatsu Photonics).
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2

Bacterial Fixation and Microscopic Imaging

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At the desired growth conditions, bacteria were fixed with 3% (w/v) paraformaldehyde (PFA) for 10 min and adjusted to a final PFA concentration of 1%. These fixed bacteria were centrifuged (4300  × g, 2 min, RT) and resuspended in phosphate-buffered saline (PBS), pH 7.4. A volume of 50 μL of the bacterial suspension was dropped on poly l lysine-precoated coverslips and incubated for 15 min at RT. The attached bacteria were washed three times with PBS, and the coverslip was mounted on slides using ProLong Gold Antifade (Molecular Probes). Images were acquired on an inverted Leica DMI 6000B microscope with an automated CTR/7000 HS controller (Leica Microsystems) and an Orca-R2 charge-coupled-device (CCD) camera (Hamamatsu Photonics).
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3

Immunofluorescence Analysis of Salmonella Infection

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NRK-49F fibroblasts were seeded on coverslips to a confluence of 50–60% in 24-well plates and infected with wild-type, ∆mrdA and ∆PBP2SAL strains. Infected cells were fixed at 2, 4, 8 and 24 hpi in 3% PFA (15 min, RT), and processed for immunofluorescence microscopy, as described70 (link). Briefly, after PFA fixation, the infected cells were washed in PBS pH 7.4 and incubated for 10 min at RT in blocking solution containing 0.1% (w/v) saponin and 1% (v/v) goat serum. Incubations with primary and secondary antibodies were performed in this same solution of 0.1% (w/v) saponin and 1% (v/v) goat serum during 45 min each, with three washes in PBS pH 7.4 after the respective incubations. Coverslips were finally mounted on slides using ProLong Gold Antifade (Molecular Probes). Rabbit polyclonal anti-S. Typhimurium LPS (cat. no. 229481, 1:1000, Difco Antiserum-BD Diagnostics, Sparks, MD) and goat polyclonal anti-rabbit IgG conjugated to Alexa 488 (1:1000, cat. no. A-11008, ThermoFisher Scientific), were used as primary secondary antibodies, respectively. Images were acquired on an inverted Leica DMI 6000B fluorescence microscope with an automated CTR/7000 HS controller (Leica Microsystems) and an Orca-R2 charge-coupled-device (CCD) camera (Hamamatsu Photonics).
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4

Bacterial Growth and Imaging Protocol

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Overnight bacterial cultures were centrifuged (8,000 × g, 10 min, room temperature [RT]) and diluted 1:100 in LB at the desired pH (7.4, 5.8, or in the range 4.0 to 5.8) to exponential phase (optical density at 600 nm [OD600] ≈ 0.2 to 0.3). To maintain stable growth conditions (exponential phase), cultures were diluted 1:3 every 40 min in LB medium at the appropriate pH (5.8 or 7.4). After 2 h, bacteria were harvested (4,300 × g, 5 min, RT), washed in phosphate-buffered saline (PBS), and fixed with 3% paraformaldehyde. Images were acquired on an inverted Leica DMI 6000B microscope with an automated CTR/7000 HS controller (Leica Microsystems) and an Orca-R2 charge-coupled-device (CCD) camera (Hamamatsu Photonics).
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5

Immunofluorescence Analysis of Salmonella Infection

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NRK-49F fibroblasts were seeded on coverslips to a confluence of 50–60% in 24-well plates and infected with wild-type, ∆mrdA and ∆PBP2SAL strains. Infected cells were fixed at 2, 4, 8 and 24 hpi in 3% PFA (15 min, RT), and processed for immunofluorescence microscopy, as described70 (link). Briefly, after PFA fixation, the infected cells were washed in PBS pH 7.4 and incubated for 10 min at RT in blocking solution containing 0.1% (w/v) saponin and 1% (v/v) goat serum. Incubations with primary and secondary antibodies were performed in this same solution of 0.1% (w/v) saponin and 1% (v/v) goat serum during 45 min each, with three washes in PBS pH 7.4 after the respective incubations. Coverslips were finally mounted on slides using ProLong Gold Antifade (Molecular Probes). Rabbit polyclonal anti-S. Typhimurium LPS (cat. no. 229481, 1:1000, Difco Antiserum-BD Diagnostics, Sparks, MD) and goat polyclonal anti-rabbit IgG conjugated to Alexa 488 (1:1000, cat. no. A-11008, ThermoFisher Scientific), were used as primary secondary antibodies, respectively. Images were acquired on an inverted Leica DMI 6000B fluorescence microscope with an automated CTR/7000 HS controller (Leica Microsystems) and an Orca-R2 charge-coupled-device (CCD) camera (Hamamatsu Photonics).
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6

Bacterial Fixation and Microscopic Imaging

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At the desired growth conditions, bacteria were fixed with 3% (w/v) paraformaldehyde (PFA) for 10 min and adjusted to a final PFA concentration of 1%. These fixed bacteria were centrifuged (4300  × g, 2 min, RT) and resuspended in phosphate-buffered saline (PBS), pH 7.4. A volume of 50 μL of the bacterial suspension was dropped on poly l lysine-precoated coverslips and incubated for 15 min at RT. The attached bacteria were washed three times with PBS, and the coverslip was mounted on slides using ProLong Gold Antifade (Molecular Probes). Images were acquired on an inverted Leica DMI 6000B microscope with an automated CTR/7000 HS controller (Leica Microsystems) and an Orca-R2 charge-coupled-device (CCD) camera (Hamamatsu Photonics).
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7

Bacterial Growth and Microscopy

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Bacteria in overnight cultures were centrifuged (4300 × g, 2 min, RT), washed in PCN medium with the corresponding pH (4.6 or 7.4) and salt concentration (0 mM or 200 mM NaCl), and used to inoculate the respective media to an initial optical OD600 of 0.02. After 4 h growing with agitation (150 rpm) at 37°C, bacteria were harvested (6800 × g, 4 min, 4°C), washed twice in PBS buffer, fixed with 3% paraformaldehyde (PFA) for 10 min, and adjusted to a final paraformaldehyde (PFA) concentration of 1%. For microscopy, fixed bacteria were centrifuged (4300 × g, 4 min, RT) and resuspended in an equal volume of PBS. A volume of 30 μl was dropped on poly‐L‐Lys precoated coverslips and incubated for 10 min at RT. Attached bacteria were washed four times with PBS and the coverslip was mounted on slides using ProLong Gold Antifade (Molecular Probes). Images were acquired on an inverted Leica DMI 6000B microscope with an automated CTR/7000 HS controller (Leica Microsystems) and an Orca‐R2 charge‐coupled‐device (CCD) camera (Hamamatsu Photonics).
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8

Immunofluorescence of Intracellular Salmonella and E. coli

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NRK‐49F fibroblasts were seeded on coverslips to a confluence of 40–50% in 24‐well plates and infected as described before, with SV5015 and MD5460 strains. Infected cells were fixed at 24 h post‐infection in 3% paraformaldehyde (15 min, RT), and then processed for immunofluorescence microscopy as described previously (López‐Montero et al., 2016 (link)). For localization of intracellular Salmonella and E. coli, rabbit polyclonal anti‐S. Typhimurium LPS (ref. 2948‐47‐6, 1:1000, Difco Laboratories) and rabbit polyclonal anti‐E. coli surface antigens (ref. B65001R, 1:1000, Life Science) were used as primary antibody, respectively. Goat polyclonal anti‐rabbit IgG conjugated to Alexa 488 (1:1000, Molecular Probes) was used as secondary antibody. Nuclei were stained with Dapi (5 μg/ml). Images were acquired on an inverted Leica DMI 6000B fluorescence microscope with an automated CTR/7000 HS controller (Leica Microsystems) and an Orca‐R2 charge‐coupled‐device (CCD) camera (Hamamatsu Photonics).
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9

Bacterial Growth Assay with Antibiotics

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Overnight bacterial cultures were diluted at OD600 ∼0.01 in LB pH 4.6 and grown in 96-well plates for 8 h in the presence of aztreonam (ref. 78110-38-0, Molekula GmbH, Munich, Germany) or cefotiam hydrochloride at varied concentrations. A volume of 120 μL of each culture was harvested (4300×g, 5 min, room temperature), washed in PBS pH 7.4 and fixed with 3% (w/v) paraformaldehyde. Images were acquired on an inverted Leica DMI 6000B microscope with an automated CTR/7000 HS controller (Leica Microsystems) and an Orca-R2 CCD camera (Hamamatsu Photonics).
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10

Bacterial Fixation and Microscopic Imaging

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At the desired growth conditions, bacteria were fixed with 3% (w/v) paraformaldehyde (PFA) for 10 min and adjusted to a final PFA concentration of 1%. These fixed bacteria were centrifuged (4300  × g, 2 min, RT) and resuspended in phosphate-buffered saline (PBS), pH 7.4. A volume of 50 μL of the bacterial suspension was dropped on poly l lysine-precoated coverslips and incubated for 15 min at RT. The attached bacteria were washed three times with PBS, and the coverslip was mounted on slides using ProLong Gold Antifade (Molecular Probes). Images were acquired on an inverted Leica DMI 6000B microscope with an automated CTR/7000 HS controller (Leica Microsystems) and an Orca-R2 charge-coupled-device (CCD) camera (Hamamatsu Photonics).
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