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2 protocols using sc 313

1

RNA Extraction and Real-Time PCR Analysis

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Total RNA was extracted from tissues and cells by using Trizol reagent (Invitrogen) according to the manufacturer’s instructions. Total RNA was reverse-transcribed by using a PrimeScript RT reagent kit (Takara Bio Inc.), and small RNA polyadenylation was performed (Zhang et al., 2012 (link)). Real-time PCR was performed on a real-time PCR system (ABI 7900; Applied Biosystems). The primer sequences are provided in Table S3. Mouse monoclonal anti–TEF-1 (610922; BD), rabbit polyclonal anti-MyoD (sc-760; Santa Cruz Biotechnology, Inc.), rabbit polyclonal anti-MEF2 (sc-313; Santa Cruz Biotechnology, Inc.), mouse monoclonal anti-myogenin (sc-12732; Santa Cruz Biotechnology, Inc.), mouse monoclonal anti–α-tubulin (T6199; Sigma-Aldrich), mouse monoclonal anti–β-actin (A5316; Sigma-Aldrich), mouse monoclonal anti–glyceraldehyde 3-phosphate dehydrogenase (anti-GAPDH; KC-5G4; KangChen Bio-tech Inc.), rabbit polyclonal anti-TEAD2 (21159-1-AP [Proteintech]; 33900 [Signalway Antibody]), rabbit polyclonal anti-TEAD3 (13120-1-AP; Proteintech), and rabbit polyclonal anti-TEAD4 (12418-1-AP) antibodies were used for Western blot analysis.
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2

Evaluation of Cellular Factors in HTLV

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First, protein levels of MEF-2A and other cellular factors were assessed in Jurkat, MT-2, control and HTLV-infected primary CD4+ T cells by Western blotting. Equal protein quantities from each sample were resolved by SDS-PAGE and transferred to a PVDF membrane. Membranes were blocked for 1 hr at room temperature with Odyssey blocking buffer (Li-Cor Biosciences) and then incubated with antibodies against β-actin (Millipore), p300, p/CAF, and CBP (Abcam), pCREB, and MEF-2A (SC-313, Santa Cruz), HDAC9 (Thermo-Pierce) for 1 hr. Membranes were incubated with IRDye-conjugated secondary antibodies and signals were detected using Odyssey Infrared Imager (Li-Cor). For Co-IP, cells were suspended in ice-cold lysis buffer [Tris–HCl pH 7.4 (25 mM), NaCl (150 mM), NP-40 (1%), EDTA (1 mM), glycerol (5%)] and sonicated. The supernatant was pre-cleared with protein A/G magnetic beads and immunoprecipitation with 2 μg of MEF-2A (Santa Cruz) or Tax (LT-4) antibody followed by Western blotting with same set of antibodies as above.
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