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10 protocols using trastuzumab

1

Establishment of Trastuzumab-Resistant Breast Cancer Cells

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Human breast cancer cell lines SKBR3 and BT474 were purchased from Shanghai Academy of life Science (Shanghai, China) and cultured in RPMI-1640 medium (Gibco, Carlsbad, CA, USA) harboring with 15% fetal bovine serum (FBS) and 0.1 IU/mL insulin at 37°C with 5% CO2. Trastuzumab-resistant breast cancer cells, named SKBR3-TR and BT474-TR, were established by continuously exposing parental cells to increasing concentration of Trastuzumab (Sigma, St. Louis, MO, USA) for more than 6 months until cells displayed resistance to Trastuzumab. Trastuzumab-resistant cells were maintained in the same media supplemented with 3 μg/mL Trastuzumab.
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2

Trastuzumab-resistant Breast Cancer Cell Lines

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Parental and resistant cell lines of SKBR3 and BT474 from the American Type
Culture Collection (ATCC, Manassas, VA, USA) and the German Collection of
Microorganisms and Cell Cultures (DSMZ, Braunschweig, Germany) were donated
by Dr Park, Professor of the Department of Medical Oncology, Korea
University.
SKBR3 and BT474 epithelial breast cancer cells were cultured in the presence
of 50 μg trastuzumab (Roche, Basel, Switzerland) for approximately 3 years
to develop resistant cells. Parental cells were cultured in parallel with
resistant cells without the addition of trastuzumab. Resistance was
confirmed by cell viability assay. trastuzumab significantly reduced the
growth of wild-type parental cells compared to trastuzumab-resistant
cells.9 (link) SKBR3 cells were grown in Roswell Park Memorial
Institute medium 1640 medium (Sigma-Aldrich, St. Louis, MO, USA), and BT474
cells were grown in Dulbecco’s modified Eagle’s medium (Hyclone, Logan, UT,
USA) with 10% fetal bovine serum (Hyclone) at 37°C in 5%
CO2.10 (link)
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3

Evaluating Antibody Cytotoxicity in Cell Lines

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Viability assays were performed to determine the antiproliferative effects of trastuzumab, pertuzumab and T-DM1 (all from Roche, Basel, Switzerland), using the Cell Proliferation Reagent WST-1 (Abcam, Cambridge, United Kingdom) and following the manufacturer’s instructions. Briefly, cell lines were seeded in 96-well plates to obtain a confluency of 90%, after 24 h (5 × 103 cells/well for CAT-MT and FMCp, 15 × 103 cells/well for FMCm and 10 × 103 cells/wells for SKBR-3), and then exposed to increasing concentrations of each antibody (Table 1), with the control wells left unexposed. Phosphate buffered saline (PBS; Corning) was used as a vehicle for mAbs and ADC. After 72 h of exposure, the WST-1 reagent (Abcam) was added, followed by an incubation period of 4 h, at 37 °C, and absorbance was measured at 440 nm using a plate reader (FLUOStar Optima, BMG LabTech, GmbH, Ortenberg, Germany). Triplicate wells were used to determine each data point and three independent experiments were performed.
For the combined assays: trastuzumab plus pertuzumab, trastuzumab plus lapatinib (Sigma-Aldrich, Darmstadt, Germany) and pertuzumab plus lapatinib, a similar methodology was used, testing concentrations that covers different cytotoxic responses (Table 2).
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4

Anticancer Drug Screening Protocol

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5-Fluorouracil, oxaliplatin and irinotecan were obtained from the pharmacy of the University of Campania “Luigi Vanvitelli”. Cetuximab, panitumumab, SYM004, MM151, trastuzumab, pertuzumab and duligotuzumab antibodies were kindly provided by Merck, Amgen, Symphogen, Merrimack Pharmaceuticals, Roche and Genentech, respectively. Refametinib, a selective MEK 1/2 inhibitor was kindly provided by Bayer Italy; Pictilisib, a PI3Kα inhibitor and lapatinib were purchased from Selleckchem.
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5

Investigating EGFR-Targeted Therapies in NSCLC

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H1975 and PC9ER cells were obtained from ATCC and from Julian Downward (F. Crick Institute, London, UK), respectively. Cells were authenticated as per ATCC standards. Osimertinib was a gift from Astrazeneca (Cambridge, UK). Cetuximab and trastuzumab were obtained from Merck (Darmstadt, Germany) and Roche (Basel, Switzerland), respectively. The murine antibody mAb33 was generated in our lab [32 (link)]. The anti-GAPDH antibody was obtained from Millipore (Burlington, MA, USA) and the anti-human β1-tubulin from R&D Systems (Minneapolis, MN, USA). All other antibodies were obtained from Cell Signaling Technology (Danvers, MA, USA).
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6

Recombinant IgG2 Trastuzumab Production

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The clinically approved antibodies cetuximab (chimeric human IgG1; clone 225, Erbitux®), panitumumab (human IgG2; clone E7.6.3, Vectibix®) and trastuzumab (humanized IgG1; clone 4D5-8; Herceptin®) were obtained from Merck (Darmstadt, DE), Amgen (Thousand Oaks, California, USA) and Roche (Basel, CH), respectively. The recombinant IgG2 variant of trastuzumab was expressed transiently from the pFUSE vector system (Invivogen) in Expi293 cells (Thermo Fisher). Pure monomeric fractions were obtained by affinity purification (CaptureSelect CH1) (Thermo Fisher) and size exclusion chromatography (SEC) (Superdex 200 Increase) (Cytiva Lifesciences) using an ÄKTA Avant 25 instrument.
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7

In Vitro Growth Studies of Lung Cancer Cells

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Growth studies in vitro were conducted using the
3-(4,5-dimethylthiazol-2-yl)-2.5-diphenyl-2H-tetrazolium bromide (MTT,
Sigma-Aldrich, St. Louis, MO) and clonogenic assays. In the MTT assay, A549,
NCI-H727 or H838 cells were placed in SIT medium and various concentrations of
ZD4054, lapatinib or trastuzumab (Sigma-Aldrich, St. Louis, MO) added. After 2
days, 15 μl of 0.1 % MTT solution added. After 4 h, 150
μl of dimethylsulfoxide was added and the optical density at 570 nm was
determined. In the clonogenic assay, the effects of ET-1, BQ123, BQ788 and
gefitinib were investigated on NCI-H838 cells. The bottom layer contained
0.5% agarose in SIT medium containing 5% FBS in 6 well plates.
The top layer consisted of 3 ml of SIT medium in 0.3% agarose, ET-1,
BQ788, BQ123 and/or gefitinib using 5 × 104 lung cancer
cells. Triplicate wells were plated and after 2 weeks, 1 ml of 0.1%
p-iodonitrotetrazolium violet was added and after 16 hours at 37°C, the
plates were screened for colony formation; the number of colonies larger than 50
μm in diameter were counted using an Omnicon image analysis system.
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8

Comprehensive Analysis of Cellular Signaling Inhibitors

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Doxycycline (DOX) was used at 2 mg/ml. The following doses of inhibitors were used: 5 μM R0-3306 (CDK1i), 40 μg/ml Trastuzumab (Herceptin, HER2 inhibitor), 0.5-4 μM Erlotinib (EGFR inhibitor), 1 μM PHA-66752 (c-met inhibitor), 25 μM NSC23766 (RAC1 inhibitor), 100 nM Reparixin (CXCR1/2 inhibitor), 100 nM SCH563705 (CXCR1/2 inhibitor), 20 μM PD98059 (ERK inhibitor), 5 μM PP2 (Src inhibitor), 100 μM H2O2 (Sigma), 5 mM NAC (Sigma), 0.5 mM Apocynin, 35 μM Antimycin-A, 10 μM Mitotempo, 5 μM Nutlin-3 and 100 ng/ml Doxorubicin (DoxoR).
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9

Culturing Rat Cardiomyocytes for Drug Testing

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Doxorubicin and Trastuzumab were purchased from Sigma (Milan, Italy). Embryonic rat heart cardiomyocyte-derived cell line H9c2 was purchased from the American Tissue Culture Collection (Manassas, VA, USA) and was grown to confluence in Dulbecco’s modified Eagle’s Medium (DMEM; Microgem, Naples, Italy) with 10% foetal bovine serum (FBS; Microgem) and antibiotics (25 U/mL penicillin and 25 U/mL streptomycin) under an atmosphere of 95% air/5% CO2 at 37 °C.
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10

Integrin αvβ3 Monoclonal Antibody Protocol

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The anti-integrin αvβ3 monoclonal antibody LM609 was purchased from Millipore (Hayward, CA). The goat anti-human integrin αv polyclonal antibody was obtained from R&D systems (Minneapolis, MN), and the biotin-labeled, rat anti-mouse integrin αv monoclonal antibody was from eBioscience (San Diego, CA). The anti-biotin BN34 mouse monoclonal antibody was from Sigma Life Sciences (St. Louis, MO), and trastuzumab (Herceptin) was kindly provided by Dr. Daniel Greenwald of the Cancer Center of Santa Barbara. Horseradish peroxidase (HRP) conjugated goat anti-rat and donkey anti-goat secondary antibodies were from Millipore and R&D systems, respectively. Recombinant human integrin αvβ3 and HER2-Fc chimeras were purchased from R&D systems. Sulfo-NHS-LC-biotin and biotin quantitation kit were from Pierce (Rockford, IL). The 2,2-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid) and all other reagents of analytical and molecular biology grade were obtained from Sigma-Aldrich. iRGD peptide with sequence Ac-{CRGDKGPDC}-NH2 was synthesized in house as described2 (link).
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