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16 protocols using p cdk1

1

Antibody-Based Signaling Pathway Analysis

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Recombinant antibodies against IRS-4, αp85 were obtained from Upstate Biotechnology (Lake Placid, NY, USA). Antibodies against ERK 1/2, p-AKT (Thr 308), p-Rb (ser 807/811), Rb, E2F1, cyclin A, cyclin B, cyclin D1, cyclin E, cdk 2, cdk 4, p-cdk1, FAK, p-FAK (Tyr 925, Tyr 397), and β-tubulin were from Cell signaling Technology Inc. (Danvers, MA). Antibodies against p-ERK, p-AKT (Ser473), p-Tyr (PY99), and integrin α2 and β1 were acquired from Santa Cruz Biotechnology Inc (Santa Cruz, CA, USA). Antibodies against p-FAK (Tyr 407) were from BioSource Quality Controlled Biochemicals, Inc. (Morgan Hill, CA, USA). Goat anti anti-mouse IgG H&L chain specific peroxidase conjugate and anti-rabbit IgG conjugated to horseradish peroxidase were from Calbiochem (Barcelona, Spain). Phalloidin-FITC, PI3K inhibitor (Ly294002), p-FAK (Tyr 576, Tyr 861), and type I collagen were all from Sigma (St Louis, MO, USA). Antibodies against p-FAK (Tyr 577) were from Thermo Fisher Scientific (Waltham, MA, USA). All other reagents were of the highest grade of purity available.
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2

Antibody-Dependent Cell Cytotoxicity Assay

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RC48-ADC was provided by RemeGenCo, Ltd., and dissolved in normal saline. Trastuzumab was purchased from Shanghai Roche Pharmaceutical Ltd. Antibodies specific for HER2, pHER2, AKT, pAKT, S6, pS6, ERK, pERK, pCDK1, CDK2, cyclin E1, p53, Bcl-2, and Bax were purchased from Cell Signaling Technology (Boston, MA, USA). The antibody specific for β-actin was purchased from Sigma-Aldrich (St. Louis, MO, USA).
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3

Western Blot Analysis of Cell Signaling Proteins

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EESR-treated cells were lysed with lysis buffer (20 mM Tris-HCl [pH 7.5], 150 mM NaCl, 1 mM ethylenediaminetetraacetic acid, 1 mM ethylene glycol bis(2-aminoethyl ether) tetraacetic acid, 1% Triton X-100, 1 μg/mL leupeptin, 1 mM phenylmethanesulfonyl fluoride) for 1 hour at 4°C and centrifuged for 30 minutes at 13,000 rpm. Total soluble proteins in the supernatant were collected and the concentration of protein was determined by Bradford method. For Western blot analysis, 30 to 50 μg/mL of proteins were resolved by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and blotted onto nitrocellulose membranes. Blots were incubated at 4°C overnight with specific primary antibodies followed by horseradish peroxidase-conjugated secondary antibodies and visualized by an enhanced chemiluminescence detection system (FluoChem®FC2; Alpha-Innotech, San Leandro, CA, USA) using Western blotting luminol reagent (Santa Cruz Biotechnology, Dallas, TX, USA). CDK1, cyclin A, cyclin B, cell division cycle 25C (Cdc25C), p-Cdc25C, Wee1, p53, Fas, Fas-associated protein with death domain (FADD), Bax, caspase-3, caspase-8, caspase-9, PARP, actin primary antibodies and peroxidase-conjugated secondary antibodies were from Santa Cruz Biotechnology. Primary antibodies against CHK2, p-CHK2, p21, p-CDK1, and Bcl-2 were purchased from Cell Signaling Technology (Beverly, CA, USA).
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4

Comprehensive Antibody Panel for Cell Signaling

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Antibodies against p21 (cat. # 2947), p53 (cat. # 2524), PCNA (cat. # 13110), (JAK2 (cat. # 3230), pJAK2 (cat. # 3771), STAT3 (cat. #9139), pstat3Tyr (705) (cat. # 9145), pstat3 ser (727) (cat # 9134), (Bax (cat # 2772), Bcl2 (cat # 2872), PARP (cat. #9532), pcdk1 (cat # 9111), Cyclin B1 (cat # 4138), Bid (cat # 2002), Bim (cat # 2819), Bcl-xl (cat #2764), Survivin (cat # 2808) and GAPDH (cat # 5174), were obtained from Cell Signaling Technology, Inc (Danvers, MA, USA). P34cdc2 (cat# 8395), HPV E6 (cat # SC-480) and HPV E7 (cat. # SC-698) antibodies were obtained from Santa Cruz Biotechnology, Dallas, TX, USA.
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5

Western Blot Analysis of Cell Cycle Regulators

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Cells were seeded in 6 well plates at 250 × 103 cells/well density and were treated with Rig. Cells were seeded and treated as described in the trypan blue vital count paragraph. After incubation with the drugs, cells were lysed with a lysis buffer (5 mM Hepes pH 7.5, 150 mM NaCl, 10% Glycerol, 1% Triton X100, 1.5 mM MgCl2, 5 mM EGTA, 0.1 M PMSF, 1% aprotinine, 0.1 M Na-pyrophosphate, 0.5 M Na3VO4). Protein content was quantified using the Bradford method. 10 µg of proteins were separated in SDS-PAGE gel and transferred to a nitrocellulose membrane. Western blotting against p53 (1:1000, #9282, Cell Signaling, Danvers, MA, USA), EMI1 (1:1000, #sc-365212, Santa Cruz Biotechnology, Dallas, TX, USA), Cyclin B (1:1000, #sc-166210, Santa Cruz Biotechnology, Dallas, TX, USA), P-CDK1 (1:1000, #9111, Cell Signaling, Danvers, MA, USA), CDK1 (1:1000, #MA5-15629, Invitrogen, Waltham, MA, USA), and PLK1 (1:1000, #sc-17783, Santa Cruz Biotechnology, Dallas, TX, USA) and p21 (1:1000, #2947, Cell Signaling, Danvers, MA, USA) was performed following the manufacturer’s instructions. Immunoreactive proteins were visualized using an ECL chemiluminescence system (Amersham, Marlborough, MA, USA) and bands were quantified using ImageJ 1.52p software.
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6

Western Blot and Co-IP Analysis of TAZ Signaling

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Protein extract, western blot and co-IP were performed as described [36 (link)]. Antibodies used were as followings: mouse monoclonal anti-TAZ (1:1000) antibody from BD Biosciences; mouse monoclonal anti-β-actin (1:10, 000) and anti-FLAG (M2; 1:500) antibodies from Sigma; rabbit polyclonal anti-HA (1:1000) and anti-Thiophosphate ester (1:1000) antibodies from Abcam; rabbit polyclonal anti-MST1, MST2, LATS1, CyclinB1, Cdk1, cleaved-PARP (c-PARP), BCL-2, and pCdk1 (all diluted at 1:1000) antibodies from Cell Signalling Technology.
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7

Western Blot Analysis of Cell Signaling Proteins

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Cells were lysed and total protein extracted in RIPA lysis buffer (Applygen, Beijing, China) supplemented with protease inhibitors (Roche, Indianapolis, IN) and phosphatase inhibitors (Applygen, Beijing, China) at 4 °C for 30 min. The cell lysate was centrifuged at 12,500 rpm at 129,50 g-force for 15 min at 4 °C and protein concentrations were measured by BCA method (Beyotime, Guangzhou, China). Proteins were separated by 10% SDS-PAGE and transferred to a PVDF membrane (Millipore, Billerica, MA). After blocking with 5% fat-free milk in TBST for 1 h, membranes were immunoblotted with primary antibodies to caspase3, cleaved-caspase3, PARP, cleaved-PARP, p21, p-RB, PLK1, p-CDK1, and Aurora B (Cell Signaling Technology); p53, FOXM1, Aurora A, CDC-25C, CDK-1, cyclin B1, TOP2A, and GAPDH (Proteintech) at the appropriate dilutions with gentle shaking overnight at 4 °C. Blots were incubated with goat anti-mouse or anti-rabbit HRP-conjugated secondary antibody (1:3000; CWBIO, Beijing, China) and bands were visualized using an enhanced chemiluminescence, eECL Western Blot Kit (CWBIO, Beijing, China).
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8

Western Blot Analysis of Cell Cycle Regulators

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The following antibodies were used: Pol II CTD S2 (Bethyl cat# A300-654A, 1:10,000); Pol II CTD S5 (Bethyl cat# A300-655A, 1:10,000); Pol II (Santa Cruz cat# sc-899, 1:1000); cleaved PARP (Cell Signaling cat# 9541, 1:1000); Cleaved Caspase-3 (Cell Signaling cat# 9661, 1:1000); GAPDH (Cell Signaling cat# 2118S, 1:4000); CDK12 (Cell Signaling cat# 11973S, 1:1000); CDK7 (Santa Cruz cat# sc-365075, 1: 1000); MYCN (Cell Signaling cat# 9405S, 1: 1000); CDK1 (Santa Cruz cat# sc-53219, 1:1000), pCDK1 (Cell Signaling cat# 9114, 1:1000); CDK2 (Cell Signaling cat#2546, 1:1000), pCDK2 (Cell Signaling cat# 2561, 1:1000); cyclin H (Santa Cruz #sc-609, m1:1000).
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9

Western Blot Analysis of CWPHs Effects

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Western blot analysis was performed as described previously30 (link). Briefly, cells were treated with CWPHs (P-4.3, 231 μg/ml), incubated over a period of 24 h, 48 h and 72 h. The primary antibodies used were p53, p21, CDK1, p-CDK1 (Tyr 15), Cyclin B1, p-histoneH3 and GAPDH (Cell Signalling Technology). Further blots were treated with horseradish peroxidase–conjugated antibody. Protein bands were detected using WesternSure Chemiluminescent Substrate (LI-COR) and captured by a Versadoc imager system (Biorad, USA). Quantification of the proteins was performed using the ImageJ software with GAPDH as the internal control.
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10

β-Elemene and Immunoblotting for Cancer Research

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β-Elemene was obtained from the National Institutes for Food and Drug Control (NIFDC, Beijing, China) Antibodies against β-actin, GAPDH, CD133, CD44, Prx-1, γ-H2AX, RAD51, CDC6 and ki67 were purchased from Proteintech. Antibodies for iNOS (ab129372) were obtained from Abcam while those for E-cadherin, Vimentin, β-catenin, N-cadherin, p-CDK1, p-Rb, P21, p-IkB α, IKK α/β, p-IKK α/β were purchased from Cell Signaling Technology.
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