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6 protocols using epithelial cell medium 2

1

Cultivation of ESCC cell lines

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Human ESCC cell lines (KYSE140, KYSE150, and KYSE270) were purchased from the Japanese Collection of Research Bioresources Cell Bank (Osaka, Japan). KYSE30 was obtained from HPA Culture Collections. These cell lines were maintained in Ham's F12/RPMI1640 medium containing 2% FBS. Human esophageal epithelial cells (HEEpiC) were purchased from ScienCell Research Laboratories, Inc. (Carlsbad, CA) and were maintained in Epithelial Cell Medium-2 (ScienCell Research Laboratories). In some experiments, the cells were cultured in a 24-well plate at a density of 5 × 104 cells/well for 18 h, and then treated with 5-aza-2′-deoxycytidine (5-aza-dC; Sigma-Aldrich, Inc., St. Louis, MO) for 72 h.
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2

Immortalized Esophageal Cell Lines Protocol

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Immortalised BE cell lines BAR-T and CP-A (American Type Culture Collection, ATCC, Manassas, VA, United States) were cultured with epithelial cell medium 2 (ScienCell, Carlsbad, CA, United States), supplemented with 5% fetal bovine serum and antibiotics on primaria plates and flasks (BD Biosciences, Bedford, MA, United States). The immortalised human esophageal epithelia cell lines HET1A and EPC2 were obtained from ATCC. HET1A cell line was cultured in Dulbecco’s modified Eagle’s medium (DMEM) supplemented with 10% fetal bovine serum and antibiotics (Invitrogen). EPC2 cells were grown in keratinocyte SFM medium supplemented with 40 mg/mL bovine pituitary extract and 1.0 ng/mL epidermal growth factor (Invitrogen, Carlsbad, California, United States). All cell lines were grown at 37 °C in 5% carbon dioxide.
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3

Esophageal Cell Line Culturing Protocol

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The immortalized human normal esophageal squamous cell line (HET1A) and the esophageal adenocarcinoma cell lines (FLO-1 and OE33) were obtained from American Type Culture Collection (ATCC, Manassas, VA) and were cultured in Dulbecco's modified Eagle's medium (DMEM), supplemented with 10% fetal bovine serum and antibiotics (Invitrogen, Carlsbad, CA). Immortalized Barrett's esophagus cell line (BAR-T, a kind gift from Dr. Rhonda Souza) was cultured with epithelial cell medium 2 (ScienCell, Carlsbad, CA), supplemented with 5% fetal bovine serum and antibiotics on primaria plates and flasks (BD Biosciences, Bedford, MA). All cell lines were grown at 37°C in 5% carbon dioxide.
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4

Esophageal Cell Lines: DSC3 Expression and Methylation

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DSC3 gene expression and DNA methylation were analyzed in 10 cell lines originating from esophagus, including normal esophageal squamous epithelium (HET1A and HEEC), Barrett's esophagus (BART, CPA, and CPB) and adenocarcinomas (OE33, FLO-1, OE19, SKGT4, and JHU-Eso-Ad1). These cell lines were obtained from the American Type Culture Collection (ATCC, Manassas, VA, USA), Sigma Aldrich (St. Louis, MO, USA), ScienCell Research Laboratories (Carlsbad, CA, USA), Dr. Rhonda Souza (University of Texas Southwestern), Dr. David Beer (University of Michigan), and Dr. Jim Eshleman (John Hopkins University). The esophageal adenocarcinoma cell lines OE33, OE19, FLO-1, SKGT4, and JHU were cultured in Dulbecco's modified Eagle's medium (DMEM) media. The immortalized Barrett's esophagus cell lines were cultured with epithelial cell medium 2 (ScienCell). All the cell lines were supplemented with 10% fetal bovine serum and antibiotics (100 u/ml penicillin and 100 µg/ml streptomycin (Invitrogen, Carlsbad, CA, USA) on primaria plates and flasks (BD Biosciences, Bedford, MA, USA) in a 37°C incubator with 5% CO2.
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5

ESCC cell line culture protocol

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Three ESCC cell lines (KYSE150, KYSE30, and EC109) were obtained from Shanghai Institutes for Biological Sciences (Shanghai, China). They were cultured in RPMI 1640 medium (Invitrogen, Carlsbad, CA, USA) with 10% fetal bovine serum (FBS; Sigma-Aldrich, St. Louis, MO, USA) in a humidified atmosphere of 5% CO2 at 37°C. HEsEpiC esophageal epithelial cells were purchased from ScienCell Research Laboratories (Carlsbad, CA, USA) and cultured in epithelial cell medium-2 (ScienCell Research Laboratories).
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6

Biofabrication of Esophageal Tissue Constructs

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Human esophageal epithelial cells (hEECs; Het-1A, ATCC, USA) and human esophageal smooth muscle cells (hESMCs; ScienCell Research Laboratories, USA) were used in this study. The hEECs were cultured in LHC-9 medium (Gibco, USA) supplemented with 1% penicillin/streptomycin (P/S), and the hESMCs were cultured in smooth muscle cell medium (ScienCell Research Laboratories, USA) with 2% fetal bovine serum (FBS), 1% smooth muscle cell growth supplement and 1% P/S. When the hEECs were co-cultured with the hESMCs, epithelial cell medium-2 (ScienCell Research Laboratories, USA) with 1% epithelial cell growth supplement-2 and 1% P/S was used.
The hEECs and hESMCs were detached from the tissue culture plate with 0.25% trypsin-EDTA and centrifuged at 1,000 rpm for 3 min. The concentration of cells used in this study was 3.5 ×106 cells/ml. The hEECs and hESMCs were mixed with esophageal mucosal-derived decellularized extracellular matrix (emuc-dECM) and esophageal muscular-derived decellularized extracellular matrix (ems-dECM) pre-gel at the desired concentration, respectively. The bioinks were cross-linked at 37 °C for at least 30 min in an incubator condition.
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