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4 protocols using rat anti mouse cd16 32 clone 93

1

Quantifying Nasopharyngeal Neutrophils in Pups

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Neutrophils present in the nasopharynx were quantified as previously described (18 (link)). Briefly, nasal lavage samples from individual pups were pelleted by centrifugation at 500 × g for 5 min. Samples were resuspended in 50 μl ACK lysis buffer (Thermo Fisher Scientific) and incubated for 5 min at room temperature. Afterwards, 200 μl of PBS was added to the samples, and cells were pelleted as described above and resuspended in PBS containing 1% bovine serum albumin (BSA). Samples were stained with a LIVE/DEAD Fixable Aqua dead cell stain kit (Invitrogen, Thermo Fisher Scientific). Next, samples were blocked with a 1:200 dilution of a rat anti-mouse CD16/32 (clone 93; BioLegend). Cells were stained for 30 min at 4°C with fluorophore-conjugated antibodies (diluted 1:150) against the following surface markers: CD11b-V450 (BD), Ly6G-peridinin chlorophyll protein (PerCP)-Cy5.5 (BD), and CD45-allophycocyanin (APC)-Cy7 (BD). Samples were run on a BD LSR II flow cytometer and analyzed with BD FACSDiva software.
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2

Isolation of Lung Macrophages

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The right lung lobes were finely diced and incubated with collagenase IV (2 mg/mL) at 37 °C in RPMI media containing 5% fetal bovine serum (FBS) for 30 min, with gentle shaking every 5 min. The lung digests were filtered through a 70 μm cell strainer, washed, centrifuged, and cell pellets resuspended in 100 μL of Ca++/Mg++ free PBS containing 2% FBS and 1 mM EDTA. Cells were then treated with 0.25 μg rat anti-mouse CD16/32 (clone 93; BioLegend, San Diego, CA) for 5 min at room temperature to block nonspecific binding. An EasySep PE Positive Selection Kit (Stem Cell Technologies) was used to isolate F4/80+ macrophages from lung digests following the manufacturer’s directions. Briefly, the filtered lung digest was incubated with PE conjugated anti-F4/80 antibody (1.5 μg/mL) for 15 min at room temperature. A Selection Cocktail (100 μL/mL) was added to the cell suspension followed by Magnetic Particles (50 μL/mL) and incubation for 10 min at room temperature. The samples were then diluted with PBS containing 2% FBS and 1 mM EDTA and F4/80+ cells isolated by magnetic separation.
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3

Quantifying Nasal Neutrophils in Pups

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To quantify neutrophils, we pelleted nasal lavage samples from individual pups at 500 × g for 5 min and resuspended them in PBS containing 1% bovine serum albumin (BSA). Samples were blocked with a 1:200 dilution of a rat anti-mouse CD16/32 (clone 93; BioLegend). Cells were stained for 30 min at 4° C with fluorophore-conjugated antibodies (diluted 1:150) against the following surface markers: CD11b-V450 (BD), Ly6G-peridinin chlorophyll protein (PerCP)-Cy5.5 (BD), and CD45-allophycocyanin (APC)-Cy7 (BD). Samples were run on BD LSR II flow cytometer and analyzed with BD FACSDiva software.
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4

Multiparametric Flow Cytometry Analysis

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Analysis of cell surface markers, intracellular cytokines, and transcription factors was conducted using the CytoFLEX flow cytometer and data analyzed using the CytExpert software (Beckman Coulter, Pasadena, CA, USA). 100 μL of cell suspension was incubated with 1.25 μg/mL rat anti-mouse CD16/32 (clone 93; BioLegend) for 30 minutes on ice, followed by surface staining using the antibodies listed in Supplemental Table 1. Fixation and permeabilization were achieved using the eBioscience Intracellular Fixation and Permeabilization kits. For intracellular cytokine staining, polyclonal T cells were stimulated overnight with 1 μg/mL anti-CD3e (145-2C11; BD) and 0.5 μg/mL anti-CD28 (37.51; BD) at 37°C. Ovalbumin (Ova)-restricted T cells were incubated with 1 μg/mL OVA257–264 and/or OVA323–339 peptides for 4 hours. Four hours prior to staining cells were incubated with BioLegend Cell Activation Cocktail with Brefeldin A (#423304). Cells were washed in FACS buffer prior to acquisition. Where appropriate, the number of events of interest was extrapolated to whole tissues.
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