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Bcl2 associated x (bax)

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Bax is a protein that plays a key role in the intrinsic apoptosis pathway. It is a member of the Bcl-2 family of proteins and functions as a pro-apoptotic regulator.

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1 571 protocols using bcl2 associated x (bax)

1

Nrf2 Knockdown Impact on Target Genes

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To determine the impact of knocking down Nrf2 on its target genes
HO1 and NQO1 protein expression, cell lysates were collected and analyzed
on 10% NuPAGE gels as detailed in Madhunapantula et al.58 (link) Total protein quantity was determined using
the BCA assay.59 (link) About 50 μg of total
protein/well was loaded and analyzed as described in Madhunapantula
et al.58 (link) Expression of Nrf2, HO1, NQO1
and p53, Bax, Cyclin-D1, and P27 was measured by detecting the respective
proteins using primary antibodies recognizing Nrf2 (cat no. 12721),
NQO1 (cat no. 62262), HO1 (cat no. 5853), p53 (cat no. 9282S), Bax
(cat no. D2E11), Cyclin-D1 (cat no. SC718), and P27 (cat no. SC 393380)
obtained from Cell Signaling Technologies, Danvers, MA. Enolase (cat
no. SC-7455) and secondary antibodies (antirabbit and antigoat) conjugated
with horseradish peroxidase (HRP; rabbit cat no. SC2357 and goat cat
no. SC2020) were from Santacruz Biotechnology, Dallas, TX. The proteins
were detected using ECL (Western Bright ECL cat no. K-12045-D20),
Advansta Corporation, San Jose, CA.
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2

Apoptosis Marker Expression Analysis

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The total protein expression of cleaved caspase-3 (C-caspase-3; 1:1,000; cat. no. 9661s; Cell Signaling Technology, Inc.), Bax (1:1,000; cat. no. 2772s; Cell Signaling Technology, Inc.) and B-cell lymphoma 2 (Bcl-2; 1:1,000; cat.no. 59348; Abcam) and GAPDH (1:1,000; cat. no. AF1186; Beyotime Institute of Biotechnology) in tumor tissues was analyzed by western blotting. Western blotting was performed as previously described (23 (link)). Briefly, after quantification with a BCA kit (cat. no. P0012S, Beyotime Institute of Biotechnology), 20 µg of protein samples were resolved by 10% SDS-PAGE and transferred to nitrocellulose membranes. The nitrocellulose membrane was then blocked with 5% nonfat milk for 1 h at room temperature. After washing, the nitrocellulose membrane was incubated with C-caspase-3 (1:1,000; cat. no. 9661s; Cell Signaling Technology), Bax (1:1,000; cat. no. 2772s; Cell Signaling Technology), Bcl-2 (1:1,000; cat. no. 59348, Abcam, Cambridge, UK) and GAPDH antibody (1:1,000; cat. no. AF1186; Beyotime Institute of Biotechnology, China) overnight at 4˚C. After incubation with the secondary antibody (1:2,000; cat. no. A0181; Beyotime Institute of Biotechnology) for 2 h at room temperature, the membranes were then visualized using an ECL kit (Tanon Science and Technology Co., Ltd.) on the Tanon Imaging System.
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3

Quantification of Protein Levels in Neuronal Cells

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Protein levels in the extracts of SH-SY5Y cells or the hippocampal tissues were analyzed using western blot as previously described [5] (link) with primary antibodies against Thr205-phosphorylated tau-, Tyr307-phosphorylated protein phosphatase 2 A (PP2A)-, total PP2A (Santa Cruz Biotechnology, Santa Cruz, CA, USA) and Thr181-phosphorylated tau-, total tau-, Thr202/Tyr204-phosphorylated extracellular signal-regulated kinases 1/2 (ERK1/2)-, Thr180/Tyr182-phosphorylated p38 mitogen activated protein kinase (p38 MAPK)-, Thr183/Tyr185-phosphorylated c-Jun N-terminal kinase (JNK)-, β-actin-, total ERK1/2-, total p38-, total JNK-, hypoxia-inducible factor-1α (HIF-1α)-, B-cell lymphoma-2 (Bcl-2)-, Bcl2-associated X (Bax)-, cleaved caspase-3-specific antibodies (Cell Signaling Technology, Beverly, MA, USA). Immunoreactive bands were detected with the appropriate horseradish peroxidase-conjugated secondary antibodies (Cell Signaling Technology) and immunological complexes were visualized by enhanced chemiluminescence reagents (Millipore, Billerica, MA, USA). Western blot signals were analyzed by ImageJ software.
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4

Protein Extraction and Western Blot Analysis

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The cells were lysed in the radioimmunoprecipitation assay (RIPA) lysate of a total protein extraction kit (Bioswamp, China), and the protease inhibitor phenylmethylsulfonyl fluoride (PMSF) (Servicebio, China) and a cocktail (Servicebio, China) were added to obtain protein extracts. Then, 40 μg of protein from each group was added to sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) gels and transferred to polyvinylidene fluoride (PVDF) membranes. The membranes were incubated with primary antibodies against GSDME (#AB215191, Abcam), caspase-9 (#9502, Cell Signaling Technology), caspase-3 (#9662, Cell Signaling Technology), caspase-7 (#12827, Cell Signaling Technology), B-cell lymphoma-2 (Bcl-2) (#4223, Cell Signaling Technology), Bcl2-associated X (Bax) (#2774, Cell Signaling Technology), and GAPDH (#60004, Proteintech, China) overnight at 4°C. Then, the membranes were washed with Tris-buffered saline and tween 20 (TBST) and incubated with horseradish peroxidase- (HRP-) labelled secondary antibodies (#7074, Cell Signaling Technology). The protein bands were visualized with Image Lab software (Bio-Rad, USA).
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5

Antibody-based Analysis of Cell Signaling

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Antibodies against the eukaryotic translation initiation factor 4E binding protein 1 (4EBP-1), P-4EBP-1 (Thr37/46), the ribosomal protein S6 (S6), P-S6 (Ser240/244), β-tubulin, AMPKα, P-AMPKα (Thr172), lactate dehydrogenase A (LDH-A), P-LDH-A (Tyr10), hexokinase II (HEXII), B-cell lymphoma 2 (Bcl-2), and Bcl-2-associated X (BAX) were purchased from Cell Signalling Technologies (Danvers, MA). Antibodies against BCATm and BCATc were previously described.5 (link),27 Rapamycin and N-acetyl-leucine amide (NALA) were purchased from LC Laboratories (Woburn, MA) and BACHEM (Bubendorf, Switzerland), respectively. BAX-inhibiting peptide V5 (Bax-V5), BAX-inhibiting negative control peptide (NCP), and Hoechst 33258 were purchased from MilliporeSigma (Burlington, MA). Etoposide was purchased from Enzo Life Sciences (Farmingdale, NY).
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6

Molecular Analysis of CLSE-Treated HeLa Cells

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After treatment with CLSE for 24–72 h, HeLa cells were lysed with radioimmunoprecipitation assay (RIPA) buffer (50 mM Tris, 150 mM NaCl, 2 mM EDTA, and 1% NP-40) for 5 min at 4 °C. The primary antibodies for cyclin D1 and cyclin-dependent kinase (CDK) 2, CDK4, CDK6, GAPDH, p18INK4c, p21Waf1/Cip1, p27Kip1, p53, poly (ADP-ribose) polymerase (PARP), cleaved caspase-3, cleaved capase-8, Bcl-2, Bcl-2 associated X (Bax), PI3K, phospho-PI3K, AKT, and phospho-AKT (Ser 473) were obtained from Cell Signaling Technology (Danvers, MA, USA). Glyceraldehyde 3-phosphate dehydrogenase (GAPDH) was used as the loading control.
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7

Autophagy and Apoptosis Pathway Analysis

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BCa cell lines were seeded in six-well plates, and after 24 h of culture, the cells were treated with NA at different dose and time. Western blotting was performed using specific antibodies against, Atg3, Atg5, Atg7, Atg12, beclin 1, LC3A, LC3B (Autophagy antibody sampler kit #4445, Cell Signaling), mTOR (#2972), pmTOR (#2974), p70S6K (#2708), phospho-p70S6K (#9234), BAX (#2772), BCL-2 (#2876), cleaved caspase-3 (#9661), cleaved caspase-9 (#9505), PARP (#9542) and cleaved PARP (#9541) (Cell Signaling), and β-actin (Santa Cruz Biotechnology, Dallas, TX, USA). Protein–antibody complexes were detected with the enhanced chemiluminescence method as described earlier (Suman et al, 2013b (link)).
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8

Immunoblot Analysis of Cell Signaling

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HCT116 cells were harvested, lysed on ice in RIPA buffer (Beyotime Institute of Biotechnology, Shanghai, China) and boiled. Protein concentration was measured by BCA protein assay kit (Beyotime Institute of Biotechnology, Shanghai, China). The protein samples were separated by SDS-PAGE and transferred to the membrane (Pall, New York, NY, USA). Afterwards, the membrane was immunoblotted with the corresponding primary antibody (C-parp (#5625), C-cas9 (#9505), C-cas3 (#9661), Bcl-2 (#4223), Bax (#5023), SHP2 (#3752), P-Erk1/2 (#9101) and Erk1/2 (#9102), 1:1000, Cell Signaling Technology, Danvers, MA, USA; Tubulin (#ET1602-4), 1:5000, HUABIO, Hangzhou, China) and the appropriate HRP-conjugated secondary antibody, and determined with ECL detection reagent (Thermo Scientific, Waltham, MA, USA).
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9

Culturing Human Liver Cell Lines

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Two human HCC cell lines (HepG2 and Huh-7) and human normal liver cell line (MIHA) were purchased from ATCC (Manassas, VA, USA) and were cultured in Dulbecco's modified eagle's medium containing 10% fetal bovine serum (Gibco, Waltham, MA, USA) and 100 U ml−1 penicillin-streptomycin (Gibco). The culture environment was maintained at 5% CO2 and 37 °C in humidified air. The culture medium was changed three times per week.
MEL was purchased from Sigma-Aldrich (Darmstadt, Germany). Primary antibodies for RRM2, β-actin, Bax, Bcl-2, proliferating cell nuclear antigen (PCNA), matrix metalloproteinase-2 (MMP2), matrix metalloproteinase-9 (MMP9), Caspase 3 and p53 were purchased from Cell Signaling Technology (Beverly, MA, USA).
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10

Proteomic Analysis of ST09 Treatment

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A total of 75,000 cells/mL were seeded and treated with ST09 (20, 40, 60, and 80 nM) for 48 h and the whole cell lysate was prepared as described [13 (link)]. Next, 30 µg of cell lysates was electrophoresed on 10 to 12% of SDS-PAGE (poly acrylamide gel electrophoresis) and were transferred to a polyvinylidene fluoride membrane (Millipore, Burlington, MA, United States). Blocking was performed using 5% skim milk in 1× PBS and then probed with primary antibodies: MMP2 from Biolegend, MMP1 from elabscience, Apaf, Bad, Bcl2, cytochrome c, Tubulin from Santa-Cruz Biotechnology, CA, and Caspase 9, Caspase 3, PARP, Vimentin, Bax, and GAPDH from Cell Signaling Technology, Beverly, MA, USA, followed by HRP-conjugated secondary anti-rabbit, anti-mouse antibodies (Cell Signaling Technology). The blots were developed using chemiluminescence reagent (Clarity Western ECL blotting substrate, Biorad) and the blot images were captured by the Chemidoc-XRS Biorad gel doc system. The protein band images were quantified using GelQuant.Net, BiochemLab solutions.
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