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120 protocols using tgf β3

1

Modulating WNT Signaling in Chondrogenesis

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For WNT ligands treatment during chondrogenesis, pellets were treated with either 10 ng ml−1 TGF-β3 (control group) or a combination of 10 ng ml−1 TGF-β3 and 100 ng ml−1 individual WNT ligand (WNT2B, WNT3A, WNT4, WNT5B, or WNT7B, all from R&D system) in chondrogenic medium from d0 to d42 as appropriate. For WNT ligands treatment during the Cp stage, cells were supplemented with either 20 ng ml−1 BMP4 (R&D Systems, #314-BP-010) alone (control group), a combination of 20 ng ml−1 BMP4 and 1 μM C59, or a combination of 20 ng ml−1 BMP4 and 100 ng ml−1 WNT3A (R&D Systems, #5036-WN-010) in mesodermal differentiation medium from d7 to d12.
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2

Modeling Cardiac Fibroblast Constructs

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Constructs were assembled as previously described [33 (link),34 (link),47 (link)]. Briefly, the hCFs were plated at a density of 1 × 106 cells/mL on 6-well plates containing polycarbonate membrane inserts with 0.4 μm pores (Transwell: Corning Costar; Charlotte, NC, USA). hCFs were cultured for 4 weeks in construct medium (EMEM, 10% FBS, and a stable Vitamin C [VitC] derivative [0.5 mM 2-O-α-D-glucopyranosyl-L-ascorbic acid: Wako Chemicals USA.; Richmond, VA, USA]). Four experimental groups were tested: (1) Control: construct medium; (2) TGF-β3: construct medium containing 0.1 ng/mL TGF-β3 (R&D Systems; Minneapolis, MN, USA); and (3) TGF-β1: construct medium containing 0.1 ng/mL TGF-β1 (R&D Systems), and (4) TGF-β1 + FAKi: construct medium containing 0.1 ng/mL TGF-β1 and 10 μM concentration of FAK inhibitor (FAKi) (CAS 4506-66-5; Santa Cruz Biotechnology; Dallas, TX, USA). All samples were collected and processed for quantitative reverse transcription polymerase chain reaction (qRT-PCR), western blot, and immunofluorescence.
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3

Differentiation of hSSCs into DA Neurons

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The protocol for transdifferentiating hSSCs into functional DA neurons included two steps. First, hSSCs were seeded at a density of 1 × 104 cells/cm2 on poly-lysine-coated plastic coverslips or 6-well plates with OECCM containing 15 ng/ml GDNF (R&D Systems), 5 μM RA, 250 ng/ml SHH (R&D System), 1 ng/ml TGFβ3 (R&D System), 100 ng/ml FGF8α (R&D Systems), 1 mM VPA (Sigma), 10 μM SB (Sigma), and 1 μM forskolin (Sigma). The induction medium was changed every 2 days. After 4 days of induction, this medium was supplemented with 250 ng/ml SHH (R&D System), 1 ng/ml TGFβ3 (R&D System), 100 ng/ml FGF8α (R&D Systems) and maintained for another 3–4 weeks. Notably, at least 5 duplicate wells or coverslips were set up in each experiment. Thereafter, the cultures were observed and imaged under an inverted contrast microscope.
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4

Generation of Pathogenic and Non-pathogenic TH17 Cells

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CD4+ T cells were purified from spleen and lymph nodes (LNs) with anti-CD4 microbeads (Miltenyi Biotech) and then further sorted as naive CD4+CD44loCD62Lhi T cells using a FACSAria III sorter (BD Biosciences). Sorted cells were activated with plate-bound anti-CD3 (4 μg/mL) and soluble anti-CD28 (2 μg/mL, both BD Biosciences) in the presence of polarizing cytokines. For TH17 differentiation, the following reagents were used: 2.5 ng/mL recombinant human TGFβ1 (eBioscience) and 20 ng/mL recombinant mouse IL-6 (R&D Systems) for nonpathogenic TH17 cells. Pathogenic TH17 cells were differentiated with 25 ng/mL of IL-1β (R&D Systems), 20 ng/mL of IL-6, and 20 ng/mL of IL-23 (R&D Systems). Alternatively, as indicated in the text, TGFβ1-induced pathogenic TH17 cells were differentiated in the presence of 2.5 ng/mL TGFβ1, 20 ng/mL IL-6, and 20 ng/mL of IL-23. TGFβ3-induced cells were generated with 2.5 ng/mL TGFβ3 (R&D Systems) and 20 ng/mL IL-6. Cells were cultured for 3 days and collected for RNA, intracellular cytokine staining, and flow cytometry. FICZ (Enzo Life Sciences; 100 nM) and CH223191 (Sigma-Aldrich; 30 μM) were added at the start of the cultures where indicated.
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5

Chondrogenic Differentiation of Mesenchymal Cells

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Passage 2–3 pre-differentiated cells were trypsinized and resuspended in differentiation medium supplemented with 100 nM dexamethasone and 10 ng/mL TGF-β3 (R&D Systems) at a density of 1 × 106 cells/mL. Aggregate cultures were produced by placing cells in wells of a U-bottom 96-well plate (125,000–250,000 cells per well, depending on the experiment) or in 15-mL conical tubes (500,000 cells per tube). Cells were pelleted by centrifugation at 200 × g and cultured for 3–4 weeks prior to treatment with cytokine (0, 0.1–1 ng/mL IL-1α, or 20 ng/mL TNF-α) in the absence of dexamethasone and TGF-β3. Three days later, aggregate cultures and culture supernatant specimens were harvested for gene expression, biochemical, and histological analyses. Detailed methods for these measurements, including ELISA processing, are provided in Supplemental Experimental Procedures.
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6

Chondrocyte Extracellular Matrix Fabrication

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Gelatin from porcine skin, paraffin oil, SPAN80, EDC, and N-hydroxysuccinimide (NHS) were purchased from Sigma-Aldrich (USA). Glutaraldehyde and acetone were purchased from Daejung Chemicals and Metals (South Korea). TGF-β3 and matrilin-3 were purchased from R&D System (USA). TGF-β3 antibody was purchased from Proteintech (USA) and FITC-labeled matrilin-3 antibody was purchased from Biorbyt (USA). An Alexa Fluor 594 antibody labeling kit was obtained from Life Technologies (USA). StemFit 3D® was purchased from Microfit (South Korea). All culture media were purchased from Hyclone (GE Healthcare, UT, USA). A cell counting kit-8 (CCK-8) assay was purchased from Dojindo (Japan). Trizol reagent was purchased from Qiagen (Hilden, Germany), while the reverse transcription kit and SYBR® Green were purchased from Takara (Japan).
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7

Mesenchymal Stem Cell Mechanobiology

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TMSCs were subjected to two types of treatment: TGF-β3 and mechanical strain. TMSCs were cultured at 1 × 104 cells/cm2 in six-well UniFlex plates coated with COL1. TMSCs were incubated for 1, 3, 7, and 14 days in DMEM/low-glucose containing 10% FBS and 50 μg/mL L-ascorbic acid 2-phosphate (Sigma-Aldrich, MO, USA), with 10 ng/mL TGF-β3 or mechanical strain (R&D Systems, Minneapolis, MN, USA). During harvesting, the medium was changed, and TGF-β3 was supplemented every 2–3 days. The mechanical strain was applied to TMSCs once for 1 h per day using a Flexcell FX-5000 Tension system (Flexcell®, Burlington, NC, USA). The cells were subdivided into three groups: Static, 2, and 5%. The mechanical strain was expressed as a sine wave with a frequency of 0.5. Each experiment was repeated twice per patient.
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8

Cultivation and stimulation of ccRCC cells

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Human ccRCC cells harboring mutant VHL, OS‐RC‐2 (RIKEN Cell Bank, Ibaraki, Japan) and human ccRCC cells harboring wild‐type VHL, Caki‐1 (Cell Resource Center for Biomedical Research, Tohoku University, Miyagi, Japan) were cultured in RPMI‐1640 medium (Thermo Fisher Scientific, Waltham, MA, USA) and minimum essential medium (MEM; Thermo Fisher Scientific) containing 10% FBS, 100 U/mL penicillin, and 100 μg/mL streptomycin, respectively. For the stimulation of TGF‐β or bone morphogenetic protein (BMP), TGF‐β1, TGF‐β3, or BMP‐4 ligands (R&D Systems, Minneapolis, MN, USA) were reconstituted in 4 mmol/L HCl containing 0.1% BSA (Sigma‐Aldrich, St Louis, MO, USA) and used at a concentration of 1 ng/mL (TGF‐β1 and TGF‐β3) or 30 ng/mL (BMP‐4).
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9

Multilineage Differentiation of Bone Marrow Stem Cells

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To assess the multilineage differentiation capacity, the obtained bone marrow stem cells (BMSC) underwent osteogenic, adipogenic, and chondrogenic induction by different culture media.
For osteogenic differentiation, cells were cultured with osteogenic medium with α-MEM supplemented with 10% FBS, 10−7 M dexamethasone (Sigma-Aldrich), 10 mM β-glycerol phosphate (Sigma-Aldrich), and 50 mM ascorbate-2-phosphate (Sigma-Aldrich). After 3 weeks of differentiation, the mineralization was stained by Alizarin Red S staining. For adipogenic differentiation, cells were cultured with α-MEM supplemented with 10% FBS, 10−6 M dexamethasone, 0.5 μM isobutylmethylxanthine (IBMX, Sigma-Aldrich), and 10 ng/mL of insulin (Sigma-Aldrich) for 2 weeks. Lipid accumulation was identified by Oil Red O staining. For chondrogenic differentiation, cells (1 × 106) were seeded in polypropylene tubes with DMEM supplemented with 10−7 M dexamethasone, 1% insulin-transferrin-selenium (ITS, Sigma-Aldrich), 50 μM ascorbate-2-phosphate, 1 mM sodium pyruvate (Sigma-Aldrich), 50 μg/mL of proline (Sigma-Aldrich), and 20 ng/mL of TGF-β3 (R&D Systems, Minneapolis, MN, USA). After 3 weeks in culture, the pellets were fixed in 10% buffered formalin for 48 h and embedded in paraffin. Then, 4 μm thick sections were processed for toluidine blue staining (Sigma-Aldrich).
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10

Chondrogenic Differentiation of Cells

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Cells were seeded into 24-well plates or into 200 μl microfuge tubes and centrifuged down to form cell pellets. Cell cultures in plates or in tubes were treated for 3 weeks with chondrogenic medium, consisting of high-glucose DMEM supplemented with 100 nmol/L dexamethasone, 50 μg/ml ascorbic acid-2-phosphate, 100 μg/ml sodium pyruvate, 40 μg/ml l-proline, 10 ng/ml recombinant human transforming growth factor-β3 (TGF-β3; R&D Systems, Minneapolis, MN), and 50 mg/ml ITS-premix stock (BD Biosciences). The medium was changed every 3 days. Chondrogenic cell cultures or pellets were fixed in 4% buffered paraformaldehyde for 60 min, washed and stained with Alcian blue (pH 3.0) to detect sulfated proteoglycans.
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