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17 protocols using progres c5 camera

1

Histological Analysis of Mammary Tumors

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Dissected mammary tumors, mammary glands and lungs were fixed in 10% neutral buffered formalin and embedded in paraffin wax. Sections (6μm) were deparaffinized in xylene (2×5min) and rehydrated in descending concentrations of ethanol (2×100%, 95%, 70%; 5min) before being placed in ddH2O (2×3min). Tissues were then stained in 1% Harris's Hematoxylin for 1 min before being washed in tap water and differentiated in acid ethanol. Slides were dipped in 70% ethanol (30sec) and put into alcoholic Eosin (2min) and finally placed back into 70% ethanol (2×30sec). Slides were then dehydrated and mounted using Cytoseal. Images were captured using a Brightfield microscope equipped with a ProgRes C5 camera (Jenoptik) and ProgRes Mac CapturePro 2.7.6 imaging software. Multiple rounds of sectioning and staining were used to evaluate lung histology for evidence of lung metastases. Clusters of nuclei in intimate proximity with bronchioles, typical of bronchus associated lymphatic tissue, were not included in the quantification of lung tumors. Lung tumour area was evaluated by measuring the length and width of lung tumors which were used to determine the area of an ellipse using ImageJ and the area of multiple lung tumors per mouse was averaged (National Institutes of Health, Bethesda, MD).
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2

Characterizing Fungal Spore Morphology

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The characteristics of the sori and teliospores were examined on infected plants. Pictures of sori were taken using a Nikon D5100 camera. Teliospore characteristics were studied using a compound microscope (LM; BX60F; Olympus optical Co. Ltd., Japan) equipped with ProgRes C5 camera (JENOPTIK, Germany) and CapturePro software; and a scanning electron microscope (SEM; Hitachi SU6600) at 5.0 kV at the Clemson University Electron Microscopy Facility. For LM, teliospores were mounted in lactic acid (85–90 %, VWR, International, LLC) (Savchenko et al. 2014 (link)) and examined at 1 000 × magnification. The diameters of 30 teliospores, oriented in plane view so that they appeared globose, were measured from each sample collection. The colors of the sori and the teliospores were described according to Rayner (1970) . For SEM examination, teliospores were dusted on double-sided adhesive carbon tape, mounted on aluminum stubs, and sputter-coated with platinum using a Cressington sputter-coater (ca. 30 nm in 6 min).
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3

Subcellular Localization of Nrf2 Protein

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The subcellular localization assay was performed as previously described [18 (link)]. Cells (2 × 105 cells/well) were seeded onto 12 mm coverslips in 12-well plates and subsequently treated with either the vehicle control (DMSO), HmARE, or sulforaphane (SFN). After 6 h, the cells were fixed using 4% paraformaldehyde (Sigma Aldrich, St. Louis, MO, USA) in PBS (pH 7.4) for 15 min. Following PBS washing, permeabilization was achieved by immersing the cells in a 0.3% Triton X-100 solution in PBS for 10 min, followed by blocking with normal goat serum (Vector Lab., Burlingame, CA, USA). Subsequently, the cells were incubated with anti-Nrf2 rabbit IgG (Cell Signaling, Beverly, MA, USA), followed by incubation with anti-rabbit IgG conjugated with FITC (Life Technology, Eugene, OR, USA). The cells were mounted using a mounting medium containing DAPI (Abcam, Cambridge, MA, USA) for nuclear counterstaining. Fluorescent images were captured using a Zeiss Axioskop 50 fluorescence microscope (Carl Zeiss, Jena, Germany) equipped with a ProgRes C5 camera (Jenoptik, Jena, Germany).
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4

Time-lapse Fluorescence Microscopy Imaging

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Time-lapse video microscopy images were obtained with a Leica DMIRBE fluorescence microscope equipped with an ORCA-ER digital camera (Hamamatsu Photonics), using Volocity 6.1.1 software (Improvision). Light microscopy images of tissue sections were obtained with a Leica DM-LRE2 microscope equipped with a ProgRes C5 camera (Jenoptik Optical Systems, Jupiter, Florida, USA) and ProgRes Mac CapturePro 2.7.6 (Jenoptik) imaging software.
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5

Immunohistochemistry and Immunofluorescence Techniques for Protein Localization

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FFPE tissue sections were deparaffinized and rehydrated through a series of decreasing ethanol washes. Heat induced epitope retrieval was performed using a 20mM sodium citrate pH 6.0 solution in a pressure cooker for 30 minutes followed by pressure release and gradual cooling to 45°C. Sections were washed in PBS, blocked in PBS containing 10% goat serum, incubated with primary antibody overnight at 4°C, then with secondary antibody for one hour at room temperature. For IHC, signal was developed using the ImmPACT DAB Substrate Kit (Vector Laboratories SK-4105). Images were taken using a Zeiss Axioplan microscope fitted with a Jenoptik ProgRes C5 camera. For immunofluorescence, images were taken using a Zeiss LSM780 Confocal microscope. For super-resolution STED microscopy, images were taken using a Leica TCS SP8 Confocal microscope. Colocalization was determined using FIJI ImageJ. Threshold values for each channel were calculated for each set of images. Colocalization values were determined using the Colocalization Threshold plugin of ImageJ. One-way ANOVA with Bonferroni correction for multiple comparisons was used to determine statistical significance.
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6

Skeletal Staining and Clearing

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E14.5, E16.5, E17.5, E18.5, and P0 embryos were skinned, eviscerated, and fixed in 95% ethanol overnight. Staining was performed with Alcian blue/Alizarin red (0.015% Alcian blue, 0.005% Alizarin red, 5% glacial acetic acid, 70% ethanol) overnight at 37°C. Skeletons were subsequently cleared in 1% KOH for 24hrs then transferred through a glycerol:KOH series of increasing glycerol concentration and decreasing KOH concentration. Skeletons were photographed in 80% glycerol using a Nikon SMZ-U dissecting scope fitted with a Jenoptik ProgRes C5 camera. Images of full P0 skeletons were merged using the Adobe Photoshop Photomerge function.
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7

Thyroid Specimen Staining and Cell Imaging

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Human thyroid specimens were purchased from US Biomax and were trichrome stained or stained for eIF4E. Antigen retrieval was carried out as previously described (31 (link), 32 (link)). Photographs for quantitative comparison were taken using FeinOptic microscope and Jenoptik ProgRes C5 camera. Cell lines (K1, MDA-T85, CD18 and Panc1) growing on glass coverslips were stained for phalloidin (Alexa Fluor 488) at a ratio of 1:500 and pictures were taken using FeinOptic microscope and Jenoptik ProgRes C5 camera.
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8

Embryo Morphometry via Microscopy

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The images of embryo outgrowths and dissected parts of the conceptus, including the yolk sac, embryo, and heart, were photographed using a ProgRes C5 camera and Capture Pro software (Jenoptik Optical Systems, Jena, Germany). Quantitative measurements of the areas of inner cell mass and trophectoderm in the outgrowths, the crown-rump length in whole-mount embryos, and the width and height of heart chambers in whole-mount hearts were carried out using ImageJ software (NIH).
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9

Skin Histopathology and Mast Cell Analysis

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Approximately equal regions of individual NC/Nga mouse dorsal skin tissues were trimmed based on the sagittal axis. Skin tissues were fixed in 10% formalin for 24 h. After paraffin embedding using Shandon Citadel 2000 (Thermo Fisher Scientific) and Shandon Histostar (Thermo Fisher Scientific), 3–4 μm serial sections were made by each paraffin block using RM2255 (Leica Biosystems, Nussloch, Germany). The skin tissues were stained with hematoxylin and eosin for general histopathology, and toluidine blue stain for mast cells. Histological data of skin tissues were observed using Model Eclipse 80i (Nikon, Tokyo, Japan) equipped with the ProgRes™ C5 camera (Jenoptik Optical Systems GmbH, Jena, Germany) and iSolution FL ver 9.1 image analyzer (IMT i-solution Inc., Bernaby, BC, Canada).
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10

Immunodetection of Neurofilaments in E10.5 Embryos

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E10.5 embryos were fixed in 4% paraformaldehyde in PBS at 4°C, rinsed in PBS, then permeabilized in PBS with 0.5% Triton X-100 for 24 h at 4°C. Neurofilament immunodetection was performed as previously described (Ray et al., 2020 (link)). Primary anti-neurofilament antibody (Developmental Studies Hybridoma Bank, 2H3) was used at a 1:20 dilution, and anti-mouse horseradish peroxidase (HRP)-conjugated secondary antibody (Jackson ImmunoResearch, 115-035-003) was used at 1:1000 dilution. Signal was developed using an ImmPACT DAB Substrate Kit (Vector Laboratories, SK-4105). Photographs were taken using a Nikon SMZ-U dissecting scope fitted with a Jenoptik ProgRes C5 camera.
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