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4 protocols using cd163 10d6

1

Immunohistochemical Analysis of Immune Markers

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Immunohistochemistry was performed as described previously.19 (link) Briefly, after heat-induced epitope retrieval, sections (2 μm) were blocked with Donkey serum (Dako, Hamburg, Germany) and incubated with rabbit-derived antibodies specific for CD68 (PG-M1; Dako), inducible nitric oxide synthase (iNOS; polyclonal; Abcam, Cambridge, United Kingdom), TNF-α (P-T2; Abcam), CD163 (10D6; Novocastra, Berlin, Germany), or stabilin-1 (polyclonal; Sigma-Aldrich, Deisenhofen, Germany). Biotinylated donkey anti-rabbit (Dianova, Hamburg, Germany) was visualized using the REAL Detection System with alkaline phosphatase/RED (Dako). Nuclei were counterstained with hematoxylin and images acquired by light microscopy (Carl Zeiss MicroImaging, Oberkochen, Germany). Positive cells were quantified and averaged from high power fields (0.237 mm2).
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2

Immunohistochemical Analysis of Tumor Markers

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Immunohistochemistry was performed on 2‐μm FFPE sections in an automated immunostainer (Autostainer Link48; Dako, Glostrup, Denmark) according to the manufacturer's instructions. The following antibodies were used: β‐catenin 14 (1 : 1000; BD Transduction, South San Francisco, CA, USA), CD3 polyclonal (1 : 400; Dako), CD4 4B12 (1 : 300; Dako), CD8 C8/144B (1 : 20; Dako), CD20 L26 (1 : 400; Dako), CD21 1F8 (1 : 50; Dako), CD56 123C3 (1 : 400; Dako), CD68 KP1 (1 : 3000; Dako), CD163 10D6 (1 : 200; Novocastra, Newcastle, UK), FOXP3 259D/C7 (1 : 200; BD Pharmingen), PD‐L1 SP142 (1 : 30; SPRING, Pleasanton, CA, USA), PD1 NAT105 (1 : 100; Biocare Medical, Pikenine, Concord, NC, USA), and EZH2 5246S (1 : 50; Cell Signaling, Leiden, Netherlands).
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Comprehensive Inflammatory Cell Profiling

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Inflammatory cells were identified in mucosa and submucosa by immunostaining using antibodies: T-lymphocytes (CD3, 2GVG Ventana, Roche), B-lymphocytes (CD20, L26 Ventana, Roche), plasma cells (CD138, B-A38, Ventana, Roche), mast cells (CD117, polyclonal, Dako), and macrophages (CD163, 10D6, Novocastra). Plasmacytoid dendritic cells (PDC) were identified as CD-123 positive cells (CD123, a mixture of clone 7G3, IgG2a and clone 9 F5, IgG1; BD Pharmingen, CA) with typical plasmacytoid morphology as described [18 (link)]. Identification of conventional dendritic cells with anti-CD11c gave variable staining quality and was rejected. Eosinophils were counted from hematoxylin-eosin slides. Neutrophilic leukocytes and eosinophils were stained with CD15 (MMA, Roche) and identified based on morphology. Results were expressed as number of cells/subepithelial area (1/mm2). Mucous plug was identified by Alcian Blue-Periodic Acid-Schiff stain and scored semi-quantitatively: 0 = none; 1 = some; 2 = prominent; 3 = obstructive.
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4

Immunofluorescent Staining of Tissue Macrophages

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Samples were pre-treated by microwave incubation in pH 9 (Dako Traget retrieval). Samples were then permeabilized with 0.1% saponin (in PBS 3% BSA/HEPES, 10% human serum), and stained ON at 4 °C with the following two primary antibodies: CD68 (PGM1; 1:100; Dako) and CD163 (10D6; 1:100; Novocastra). Primary Abs were then targeted by goat anti-mouse isotype specific Ab labelled with Alexa 488 and Alexa 594 for 2 h at RT. The samples were mounted in Fluorescence Mounting Medium® (Dako) and examined using a Zeiss LSM 710 confocal microscope (Zeiss, Oberkochen, Germany). For each pair of antibodies used, standardized conditions for pinhole size, gain, and offset (brightness and contrast) were used for image capture. Images were analyzed using ImageJ software and quantification of stain was calculated as area of fluorescence on total tissue area for each sample.
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