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3 protocols using trans blot turbo transfect pack

1

Western Blot Analysis of Membrane Proteins

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Pulldowns samples were eluted, boiled in Laemmli buffer and resolved by SDS-PAGE in 7%, 12% or 15% acrylamide-bisacrylamide gels or in Mini-PROTEAN TGX Gels (Bio-Rad) then, the gels were then transferred to a nitrocellulose membrane (Bio-Rad) using the Trans-Blot Turbo Transfect Pack (Bio-Rad) and the Trans-Blot Turbo system (Bio-Rad) and detected with the corresponding antibodies anti-GFP (Santa Cruz Biotechnology), anti-NPC1 (Abcam), anti-NPC2 (Abcam), anti-Lamp1 (BD biosciences), anti-Lamp2 (BD bioscience), anti-PIKfyve (Abnova), anti-Flag (Sigma), anti-HA (Invitrogen), and anti-Tubulin (Sigma), GAPDH (Abcam) or HSP90 (Palex) as loading controls in Western blot (WB) analysis. Anti-mouse IgG (GE Healthcare, Chicago, IL, USA) or anti-rabbit IgG (Bio-Rad) conjugated to horseradish peroxidase was used at a dilution of 1:5000 was used as secondary antibody. Finally, bands obtained after development with ECL reagent were detected on a Molecular Imager Chemidoc XRSplus imaging system. The bands were quantified by densitometry and the data normalized to control values using Image lab software (Bio-Rad).
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2

Confirming GFP Expression via SDS-PAGE and WB

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To confirm the expression of GFP and GFP-N proteins, an SDS-PAGE and a Western blot (WB) was done. For the SDS-PAGE, Mini-PROTEAN TGX gels were used (Bio-Rad 4561096), then, the gels were transferred to PVDF membranes using the Trans-Blot Turbo Transfect Pack (Bio-Rad 1704159) and the Trans-Blot Turbo system (Bio-Rad). Following this, the transferred membranes were blocked in 10% skimmed milk powder dissolved in TBS-0.1% Tween (TBS-T) (50 mM Tris-HCl (pH 8.3), 150 mM NaCl and 0.5% (v/v) Tween-20) buffer for 1 h at room temperature. Primary antibodies NPC1 (Abcam, ab108921), HSP90 (Enzo Life Sciences, ADI-SPA-835), EEA1 (BD Biosciences, 610457) and SARS spike protein (Novus, NB100–56578SS) were diluted in 5% skimmed milk powder dissolved in TBS-T at 1:1000 with the exception of GFP (B-2) (sc-9996) at 1:4000, and then incubated at 4 °C overnight. After three washes, blots were incubated with appropriate anti-horseradish peroxidase (HRP) secondary antibody diluted in 5% skimmed milk powder dissolved in TBS-T at 1:5000 for 1 h at room temperature. Blots then were developed using enhanced chemiluminescence reagent (Bio-Rad) and detected with ChemiDoc™ XRS Gel Imaging System using Image Lab™ software (Bio-Rad).
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3

SDS-PAGE and Western Blot Analysis

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Samples from pulldowns were eluted, boiled in Laemmli buffer and resolved by SDS-PAGE in 7%, 12% or 15% acrylamide-bisacrylamide gels or in Mini-PROTEAN TGX Gels (Bio-Rad) then, the gels were transferred to a nitrocellulose membrane (Bio-Rad) using the Trans-Blot Turbo Transfect Pack (Bio-Rad) and the Trans-Blot Turbo system (Bio-Rad) and detected with corresponding antibodies anti-Flag (Sigma), anti-HA (Invitrogen), and anti-Tubulin (Sigma) or HSP90 (Palex) as load controls in Western blot (WB) analysis. As a secondary antibody, anti-mouse IgG (GE Healthcare, Chicago, IL, USA) or anti-rabbit IgG (Bio-Rad) conjugated to horseradish peroxidase was used at a 1:5000 dilution.
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