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5 protocols using pgl4.74 hrluc tk plasmid

1

Dual Luciferase Assay for TFAP2C

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The plasmid of pLVX-Puro-luc was obtained from Miaolingbio (Wuhan, China) and was used to construct the dual luciferase reporter gene system. The four sequences containing predicted TFAP2C binding sites were synthesized and inserted into pLVX-Puro-luc to construct luciferase reporter plasmids. The used sequences are listed in Table S3. To examine the effect of TFAP2C on luciferase activity, HEK293T cells were co-transfected with 200 ng TFAP2C or empty vector (pcDNA3.1; Invitrogen), 200 ng luciferase reporter plasmids, and 25 ng PGL4.74[hRluc/TK] plasmid (Promega). 24 h post-transfection, cell lysates were prepared and subjected to luciferase activity assay with a commercial kit (Vazyme).
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2

Reconstituted Viral Polymerase Activity Assay

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Viral RNA polymerase activity was tested in HEK293T cells using the reconstituted minigenome assay with the pPolI-WSN-NA-firefly-luciferase reporter construct (gift from Dr. Yoshihiro Kawaoka, University of Wisconsin-Madison, Madison, WI, USA) and in mouse L-cells using the pHL-NS-FF-Luc reporter construct (gift from Dr. Georg Kochs, University of Freiburg, Freiburg, Germany). The assay was performed as described in [41 (link)], except the pHW-C71, pHW-C72, pHW-C73 and pHW-C75 plasmids were used for the expression of CA/07 PB2, PB1, PA and NP proteins, respectively, and the pGL4.74(hRluc/TK) plasmid (Promega, Madison, WI, USA) for control Renilla luciferase expression. The dual luciferase assay was performed 24 h post-transfection using the Dual-Glo Luciferase Assay System (Promega). Site-directed mutagenesis was utilised to introduce amino acid substitutions in PB1 and PA expression vectors pHW-C72 and pHW-C73 as described in Section 2.4 above to test their contribution to reconstituted viral polymerase activity.
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3

Wnt Signaling Activity Assay

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The activity of the Wnt signaling pathway was detected by a Wnt signal reporter assay using the TOP/FOP TCF reporter kit (Millipore, USA). Cells were seeded in 24-well tissue culture plates at 5 × 104 cells/well in 0.5 mL of Opti-MEM (Invitrogen) at 12 h before transfection. On the day of transfection (day 1), 900 ng of the TOP flash or FOP flash construct (Millipore) together with 100 ng of the pGL4.74[hRluc/TK] plasmid (Promega) was used to transfect the cells in each well. The pGL4.74[hRluc/TK] plasmid containing the Renilla luciferase gene was used as an internal control for normalizing the transfections. Transient transfections using Lipofectamine LTX and PLUS reagent (Invitrogen) were performed according to the manufacturer’s instructions. Eight hours after transfection, the transfection medium was changed to DMEM/F-12 containing 5% FBS, and the cells were exposed to HBO. On days 3 and 5, the cells were re-transfected once and exposed to HBO as described above. After an additional 24 h of culturing, the cells were washed with PBS and harvested using 100 μL/well of passive lysis buffer (Promega). The cell lysates (20 μL) were evaluated for luciferase activity using a Dual-Luciferase Reporter Assay Kit (Promega). Luciferase activity was measured according to the manufacturer’s instructions.
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4

Dual-Luciferase Assay for Transcriptional Regulation

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NCI-H1373 cells were dispensed to Nunclon Delta Surface, a 96-well white-bottomed plate (Thermo Scientific, 136101) the day before transfection. Upon transfection, the cell density reached approximately 50%. One hundred nanograms of firefly luciferase plasmid (pGL4.17 basic, PDL-P, or PDL-P+E) and 100 ng of pGL4.74 [hRluc/TK] plasmid (Promega), which encodes Renilla luciferase driven by a thymidine kinase promoter, were co-transfected with FuGENE6 (Promega) at a FuGENE (μL) to DNA (μg) ratio of 6. Two hours later, DMSO or U0126 (20 μM) was added. Twenty-four hours after the transfection, the firefly and Renilla luciferase activities were determined with the Dual-Glo Luciferase Assay System (Promega) and an infinite M200 (TECAN) multiplate reader. After subtracting the background activity, each firefly luciferase activity was normalized using Renilla luciferase activity to determine the transfection efficiency.
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5

Hemin-Induced NF-κB Activation Assay

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Hemin (ferriprotoporphyrin IX chloride) was purchased from Sigma Aldrich (St Louis, MO, USA). NIPAM and 2,2′-azodiisobutyronitrile (AIBN) were obtained from Wako Pure Chemical Industries (Osaka, Japan). The pNifty-Luc plasmid, which contains the firefly luciferase gene under the nuclear factor (NF)-κB-inducible element; the transfection reagent LyoVec; the alkaline phosphatase substrate QUANTI-Blue; and lipopolysaccharide (LPS) were purchased from InvivoGen (San Diego, CA, USA). The pGL4.74 [hRluc/TK] plasmid, which encodes the renilla luciferase gene, as well as a dual-luciferase reporter assay system, were purchased from Promega (Madison, WI, USA). A cell counting kit-8 (CCK-8) was used to assay cytotoxicity, and was purchased from Dojindo (Kumamoto, Japan). The phosphorothioated CpG oligodeoxynucleotide (ODN) 2006 PT (5′-TCGTCGTTTTGTCGTTTTGTCGTT-3′) was synthesized by Eurofins Genomics (Tokyo, Japan). Poly-NIPAM (molecular weight [MW]=66,400, weight average molecular weight [MW]/number average molecular weight [Mn]=1.40) was a kind gift from Dr Mitsuhiro Ebara, National Institute for Materials Science (NIMS).
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