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9 protocols using cd86 bv421

1

Molecular Profiling of Cell Subsets

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Thioacetamide (TAA), Oligomycin, DMSO, and CCCP were purchased from Sigma‐Aldrich. Vinculin #V9264, STAT1 #SAB4300326, and CYP2E1 HPA009128 were obtained from Sigma‐Aldrich, while p100/p52 #06‐413 from Millipore (Billerica, MA, USA) and p105/p50 #D4P4D from Cell Signaling (Danvers, MA, USA). PRC antibody was described previously.5 Anti‐mouse: CD45 (30‐F11), CD11c (HL3), Ly6c (AL‐21), Ly6g (1A8), MHCII I‐A/I‐E (M5/114.15.2), CD19 (ID3), CD8 (53‐6.7), CD4 (RM4‐5), TCRβ (H57.597), CD11b (M1/70) were purchased from BD Biosciences and F4/80 (BM8) from eBioscience. Anit‐human: CD14‐v500, CD1a‐FITC, HLA‐DR‐APC‐H7, CD86‐BV421, CD83‐PE were acquired from BD Biosciences and CD40‐APC from eBiosciences.
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2

Multiparametric Flow Cytometry of Immune Cells

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After Zombie™ dye and Fc‐block (both BioLegend, San Diego, CA, USA) pre‐incubation, PBMC were stained with anti‐human CD14‐FITC, CD19‐PerCP‐Cy5.5, CD40‐PE‐Dazzle, CD69‐FITC, CD86‐BV421, CD95‐PE (all BD Bioscience, NJ, USA), CD4‐PE‐Cy7, CD8‐PE, CD14‐PE‐CF594, CD19‐FITC, CD20‐APC‐Cy7, CD24‐PerCp‐Cy5.5, CD25‐BV605, CD27‐PacificBlue, CD38‐FITC, CD80‐PE‐Cy7 and major histocompatibility complex (MHC)‐II‐APC (all BioLegend, CA, USA). Cytokines were evaluated after adding 1‐µL Golgi‐Plug (BioLegend) to CpG‐stimulated cells for 4 h; 500 ng/mL ionomycin and 20 ng/mL phorbol 12‐myristate 13‐acetate (PMA; Sigma Aldrich, MO) were added after 2 h. Cells were stained with anti‐human interleukin‐ (IL‐)6‐FITC, tumor necrosis factor (TNF)‐A700 and IL‐10‐PE‐CF594 (all BioLegend).
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3

Chlamydia and HIV-1 Impact on DC Maturation

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Differentiation and maturation of DCs exposed to Chlamydia or LPS and HIV-1 were analyzed by using anti-human CD11c-AlexaFluor488, HLA-DR-PerCP/Cy5.5, DC-SIGN-PE (Biolegend), CD86-BV421, CD83-APC, CD169-PE (BD Biosciences) on a FACS Verse flow cytometer (BD Biosciences). Cell surface expression of receptors for HIV and HIV-C binding was determined by flow cytometry as described using anti-human CD11b-APC, CD4 PerCP/Cy5.5 and DC-SIGN-PE (BioLegend). Data was analyzed using FACS DIVA software (BD Biosciences) and R.
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4

Comprehensive Immune Cell Profiling

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Cells were collected and incubated in PBS plus 0.1% BSA (9998S; Cell Signalling Technologies) and 5 µl Fc block per million cells for 20 min. 50 µl of cells were then incubated with 50 µl antibody cocktail diluted in PBS and 0.1% BSA for 20 min on ice in the dark. Cells were washed in 2 ml PBS and fixed in 2% PFA (15710; Electron Microscopy Sciences) diluted in PBS prior to analysis. Cells were analyzed on an LSRII flow cytometer. Antibodies were purchased from BD Biosciences Antibody (CD14-Alexa488, 562689; CD119-PE, 558934; CD86-BV421, 562433; CD11b-bv421, 562632; CD163-FITC, 563697; CD169-PE, 565248; CD206-APC, 561763; CD16-Alexa647, 557710; Alexa488 isotype, 557703; Alexa647 isotype, 57714; PE isotype, 12-4015-82; BV421 isotype, 562438; CD16-Alexa647, 557710; Alexa488 isotype, 557703). Flow cytometry data was analyzed and plotted in FlowJo (BD Biosciences).
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5

Tumor Macrophage Polarization by Flow

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The polarization of macrophages was detected by flow cytometry after the preparation of the single-cell suspension from tumors. F4/80-BV605 (BD Biosciences, CA, USA), CD45-PE-Cy7 (BD Biosciences, CA, USA), and CD11b-AF-700 (BD Biosciences, CA, USA) were used together to identify the mononuclear immune cells in the tumor, then the proportion of CD86-BV421- (BD Biosciences, CA, USA) positive cells was identified as M1, and CD206-FITC- (Invitrogen, Carlsbad, USA) positive cells were identified as M2.
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6

Comprehensive Immune Cell Profiling

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Cells were collected and incubated in PBS plus 0.1% BSA (9998S; Cell Signalling Technologies) and 5 µl Fc block per million cells for 20 min. 50 µl of cells were then incubated with 50 µl antibody cocktail diluted in PBS and 0.1% BSA for 20 min on ice in the dark. Cells were washed in 2 ml PBS and fixed in 2% PFA (15710; Electron Microscopy Sciences) diluted in PBS prior to analysis. Cells were analyzed on an LSRII flow cytometer. Antibodies were purchased from BD Biosciences Antibody (CD14-Alexa488, 562689; CD119-PE, 558934; CD86-BV421, 562433; CD11b-bv421, 562632; CD163-FITC, 563697; CD169-PE, 565248; CD206-APC, 561763; CD16-Alexa647, 557710; Alexa488 isotype, 557703; Alexa647 isotype, 57714; PE isotype, 12-4015-82; BV421 isotype, 562438; CD16-Alexa647, 557710; Alexa488 isotype, 557703). Flow cytometry data was analyzed and plotted in FlowJo (BD Biosciences).
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7

Comprehensive Immune Cell Phenotyping

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PBMC (1–4×106 cells/tube) were stained with monoclonal antibodies to B cell markers (CD19-AF700, IgM-PerCP-Cy5.5, IgD-PE-Cy7 (Biolegend), CD38-FITC, CD21-PE, CD10-PE-CF594, CD40-APC, CD86-BV421 (BD Pharmingen)) and T cell markers (CD3-AF700, CD4PacBlue (Biolegend), CD8-APC-AF750 (Invitrogen), CD45RA-ECD, CD27-PE-Cy5 (Beckman Coulter), CD27-BV650, CD38-FITC, HLA-DR-PE-Cy7, PD-1-APC, CXCR5-PE (R&D Systems)) for 40 minutes at room temperature. Stained cells were subsequently washed twice and fixed in 1% paraformaldehyde for 10 minutes at 4°C. Data was acquired within 4 hours using a BD LSRII flow cytometer (BD Biosciences – Immunocytometry Systems, San Jose, CA). Data were analyzed using Flow Jo Software (Tree Star Inc., Ashland, OR) with the gating scheme as per Supplemental Figure 1.
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8

Multiparametric Immune Cell Profiling

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Prior to antibody incubation, cells were stained with viability dye (Zombie™ dye, 1:500, Biolegend) for live cell/dead cell discrimination and incubated with Fc receptor blocking solution (Human TruStain FcX, BioLegend, CA) to prevent unspecific antibody binding. Extracellular antigens were stained using anti-human cluster of differentiation (CD)4-PE-Cy7, CD8-PE, CD14-PE-CF594 and CD19-FITC/PerCP-Cy5.5, CD20-APC-Cy7, CD25-BV605, CD27-PacificBlue, CD38-FITC, CD80-PE-Cy7, CD150-BV-421, major histocompatibility complex class II (MHC-II)-APC (all Biolegend, CA), CD19-PerCp-Cy5.5, CD40-PE-Dazzle, CD69-FITC, CD86-BV421, and CD95-PE (all BD Biosciences, NJ) antibodies. For analysis of intracellular cytokines, cells were permeabilized by adding fixation/permeabilization solution (Cytofix/Cytoperm, BD Biosciences, NJ) and stained with anti-human interleukin (IL)-6-FITC, IL-10-PE/CF594, and tumor necrosis factor (TNF)-Alexa Flour 700 (all BD Biosciences, NJ) antibodies. Apoptosis was evaluated using propidium iodide-PE and annexin V-FITC (both BioLegend, CA). Samples were analyzed using a LSRII Fortessa; FACS Diva (BD Biosciences) and FlowJo software were used to quantify flow cytometric data.
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9

Immunophenotyping of Dendritic Cells and T Cells

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The expression of co-stimulatory molecules and maturation surface markers protein of iDCs, mDCs and mDCs co-cultured with primed WJ-MSCs were analysed by flow cytometer using the following antibodies: CD14- PE-CY7, CD83- PE-CY5, CD80-FITC, CD86- BV421, CD1a-PE, CD40-BV510, CD209-APC and HLA-DR- Percp-CY5.5, all antibodies are purchased from (BD Bioscience, USA). Cell proliferation and cell-surface marker expression of activated T cells (CD4+ and CD8+) were detected using the following antibodies: CD4-APC and CD8- PE-CY7 (Biolegend, USA). Activation of T cells was detected using CD69-PE (Biolegend, USA).
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