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Ab39253

Manufactured by Abcam
Sourced in United Kingdom, United States

Ab39253 is a laboratory reagent that can be used for various experimental procedures. It is a purified monoclonal antibody targeted against a specific antigen. The core function of this product is to bind and detect the target antigen in samples.

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5 protocols using ab39253

1

Immunohistochemical Analysis of MGMT Expression

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Immunohistochemical staining was performed on a Benchmark immunohistochemistry staining system (Bond; Leica, Wetzlar, Germany) with BOND polymer refine detection solution for DAB, using anti‐MGMT (1 : 800, abcam, Cambridge, UK, ab39253) primary antibody as substrate as previously described [45 (link)]. Images were acquired using an Olympus BX46 microscope (Shinjuku City, Tokyo, Japan) as previously described. MGMT immunoreactivity was scored semi‐quantitatively by multiplying the proportion of MGMT positive cells (%) and the staining intensity (0 = none; 1 = weak; 2 = intermediate; and 3 = strong). Statistical comparison was performed using paired Wilcoxon test.
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2

Western Blot Analysis of MGMT and H3K9ac

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Proteins were extracted using RIPA lysis buffer containing protease and phosphatase inhibitors. Protein concentration was determined using the BCA Protein Assay Kit (Thermo Fisher Scientific). Approximately 30 μg of protein per sample was loaded and separated on a 15% SDS‐PAGE gel and transferred onto PVDF membranes. The membranes were blocked with 5% non‐fat milk in TBST for 1 h at room temperature and then incubated with primary antibodies overnight at 4°C, MGMT (ab39253, Abcam) and H3K9ac (ab32129, Abcam). After washing, the membranes were incubated with HRP‐conjugated secondary antibodies for 1 h at room temperature. Protein bands were visualized using the ECL Western Blotting Detection System (GE Healthcare).
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3

Western Blot Analysis of MGMT and Mismatch Repair Proteins

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Total cell lysates were analyzed by Western blot analysis as described earlier [41 (link)]. We used the following primary antibodies. For the detection of MGMT, we used a polyclonal antibody (#2739) from Cell Signaling Technology (Beverly, MA, USA) and a monoclonal antibody (ab39253) from Abcam (Cambridge, MA, USA). Anti-MSH2 (#2017) and anti-MSH6 (#5424) antibodies were from Cell Signaling. Human TRA-1-85 antibody (MAB3195) was from R&D Systems (Minneapolis, MN, USA) and beta-actin antibody (sc-47778) was from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Horseradish peroxidase-antibody conjugates (i.e., secondary antibodies) were obtained from Jackson ImmunoResearch Laboratories (West Grove, PA, USA). All antibodies were used according to the suppliers’ recommendations. All immunoblots were repeated at least once to confirm the results. Band intensities of MGMT were quantified using ImageJ, normalized relative to the respective actin control bands, and expressed in relation to the strongest reference band.
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4

Isolation and Characterization of Glioma Stem/Progenitor Cells

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The GBM cell lines, U87, A172, and U251, were purchased from the Cell Bank of the Chinese Academy of Sciences (Shanghai, China). The cells were regularly verified for cell morphology and growth characteristics by microscopic analysis. All the cells were cultured in 10% FBS-supplemented DMEM and maintained at 37 °C in a humidified atmosphere of 5% CO2 and 95% air. The procedures to obtain and stain glioma stem/progenitor (GSP) cells from U87 cells were as previously described [15 (link)]. The growth factor EGF and bEGF were purchased from PeproTech; B27 was purchased from Gibco. Rabbit polyclonal anti-Gli1 antibody (1:100, ab49314, Abcam) and mouse monoclonal anti-MGMT antibody (1:100, ab39253, Abcam) were used to stain GSP cells for immunofluorescence assay. Slides were stained with DAPI (Beyotime Biotechnology) for 5 min prior to examination using a confocal microscope.
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5

Immunohistochemistry Analysis of GBM

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With the approval of the institutional ethics committee, forty-eight patients with primary GBM whom underwent tumor resection in the Neurosurgical Department of Shanghai Tenth People’s Hospital from Jan 2011 to Dec 2013 were given informed consent and enrolled in this study. The median age was 58 years (range, 40–75); 20 patients were male and 28 female. All patients received surgical treatment and specimens were fixed with 10% formalin, embedded in paraffin, and examined histopathologically. Immunohistochemistry was done as previously described [13 (link)], and the specimens were not affected by the chemotherapy. Primary antibodies were used as follow: rabbit polyclonal anti-Gli1 antibody (1:100, ab49314, Abcam) and mouse monoclonal anti-MGMT antibody (1:100, ab39253, Abcam). The percentage of tumor cells with Gli1 nuclear staining to total cancer cells being > 10%, it was judged to be Gli1-positive. With the ratio of tumor cells stained with MGMT > 5%, it was judged to be MGMT-positive [14 (link)]. Sections from the same tissues without application of the primary antibodies were used as negative controls.
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