The largest database of trusted experimental protocols
Sourced in United States, China, United Kingdom, Germany, Canada, Japan, Italy, India

Bcl-2 is a protein that plays a key role in regulating apoptosis, or programmed cell death. It functions as an anti-apoptotic protein, helping to prevent cell death by inhibiting the activity of pro-apoptotic proteins.

Automatically generated - may contain errors

2 034 protocols using bcl 2

1

Immunoprecipitation and Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total cell lysates were prepared in 1% CHAPS buffer [5mM MgCl2, 140 mMNaCl, 1mM EDTA, 1mM EGTA, 1% CHAPS, 20mM Tris-HCl (pH 7.5), and protease inhibitors (cOmplete ULTRA, Roche)]. AlgiMatrix dissolving buffer (ThermoFisher Scientific) was used to harvest spheroids before lysis in 1% CHAPS buffer. Proteins (600–1000 μg) were immunoprecipitated with BCL-2 (#4223, Cell Signaling), BCL-XL (#2762, Cell Signaling), MCL-1 (S-19, Santa Cruz) antibodies at 4°C for 16h and coimmunoprecipitates were captured by Dynabeads Protein G at 4°C for 2 h. Beads were recovered using DynaMag spin magnet and washed twice in 1% CHAPS buffer. Total cell lysates and immunoprecipitates were separated on NuPage 10% Bis-Tris gels. After SDS-PAGE, proteins were transferred onto PVDF membranes (Millipore) and then blocked with 5% dried milk in PBS-Tween20. Membranes were incubated with primary and secondary antibodies (GE Healthcare) in a buffer containing 10% milk diluent-blocking concentrate (KPL), detected with Luminata Crescendo Western HRP substrate (Millipore). Blots were imaged with LAS4000 image analyzer (Fujifilm) on chemiluminescence mode. The following antibodies were used for immunoblotting: BCL-2 (#2872, Cell Signaling), BCL-XL (#2762, Cell Signaling), Actin (#8457, Cell Signaling), BIK (#4592, Cell Signaling), MCL-1 (S-19, Santa Cruz), p53 (DO-1, Santa Cruz).
+ Open protocol
+ Expand
2

Radiation-Induced Cell Response

Check if the same lab product or an alternative is used in the 5 most similar protocols
A549 cells were seeded in 10 cm plates at 80% confluency. The following day cells were transfected with 500 pmol 2′-O-methyl inhibitors (Ambion) directed against either miR-34 or miR-20 (labelled as Control Inhibitor). After transfection, the cells were re-plated in a six-well plate at 50% confluency. The following day cells were exposed to 6 Gy of IR and were lysed in wells at the indicated time using Passive Lysis Buffer (Promega). Cleared lysates were divided into two parts for RNA analysis (described above) and western blot analysis. CDK4, BCL2 and α-tubulin were probed using the following primary antibodies: CDK4 (Cell Signaling, #12790, 1:1,000); Bcl-2 (Cell Signaling, #2872, 1:1,000); α-tubulin (Abcam, ab15246, 1:25,000).
+ Open protocol
+ Expand
3

Evaluating Apoptosis Markers in Cervical Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were lysed with RIPA buffer and whole protein extracts were analysed through Western blotting [17 ] and then incubated with the following primary antibodies (1:1000 dilution): Bcl-2, Beclin-1, cleaved PARP, LC-3II, p62 and β-actin (Cell Signaling, MA, USA). For immunofluorescence, a primary antibody recognising Bcl-2 (Cell Signaling, MA, USA) and a secondary antibody conjugated to a fluorophore (FITC donkey anti-rabbit, Cell Signaling, MA, USA) were used. Bcl-2 expression was assessed in all paraffin-embeded cervical tissue and representative images were acquired.
+ Open protocol
+ Expand
4

Leflunomide-Induced Apoptosis Pathway Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were treated with leflunomide for 72 h, then cells were collected, after that proteins were extracted by RIPA Lysis Buffer which contained 1% Phenyl methane sulfonyl fluoride (PMSF), stockpiled at −80°C. The proteins were separated by SDS-PAGE, subsequently, transfered onto PVDF membranes (Millipore, USA). The PVDF membranes were blocked with 5% BSA for 2 h, and incubated with a primary antibody against human Tubulin (1:1000, Beyotime), LC3B (1:1000, Cell Signaling), CDK2 (1:1000, Cell Signaling), CyclinA2 (1:1000, Cell Signaling), DHODH (1:1000, Cell Signaling), BCL-2 (1:1000, Cell Signaling), Caspase-9 (1:1000, Cell Signaling), Caspase-3 (1:1000, Cell Signaling), pT172-AMPK (1:800, Cell Signaling), AMPK (1:800, Cell Signaling), pSer555-Ulk (1:1000, Cell Signaling), Ulk (1:1000, Cell Signaling), pThr 183/186-JNK (1:2000, Abcam), JNK (1:1000, Abcam), BCL-2 (1:1000, Cell Signaling) and Beclin1 (1:1000, Cell Signaling) at 4°C overnight. Then incubated with homologous secondary antibodies HRP-labeled goat anti-rabbit IgG (H+L) (1:2000, Beyotime) or goat anti-mouse IgG (H+L) (1:2000, Beyotime) for 2 h. Finally, the signal was captured by the ECL reagent (Beyotime) and visualized by Western blotting detection instruments (Clinx Science).
+ Open protocol
+ Expand
5

Western Blot Analysis of Apoptosis Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
10% tissue homogenates from the frontal cortex and hippocampus were prepared in lysis buffer, centrifuged at 13,500 g for 30 minutes at 4°C. Protein concentrations of each sample were determined by the BCA protein assay kit with BSA standards. 60 μg of total proteins were separated on 10% SDS-PAGE and transferred to nitrocellulose membranes. The membranes were incubated for 1 hour with 5% dry skim milk in TBST buffer at room temperature to block nonspecific binding. Membranes were then incubated with primary antibodies against caspase-3 at a dilution of 1:1000 (the rabbit anti-mouse cleaved caspase-3 mAb, Cell Signaling Technology, USA), Bcl-2 at 1:1000 (the rabbit anti-mouse Bcl-2 mAb, Cell Signaling Technology, USA), Mfn2 at 1:1000 (the rabbit anti-mouse mitofusin-2 mAb, Cell Signaling Technology, USA), Drp1 at 1:1000 (the rabbit anti-mouse Drp1 mAb, Cell Signaling Technology, USA), β-actin at 1:2000 (ZS-Bio, China) overnight at 4°C. Subsequently, membranes were incubated with alkaline-phosphatase-conjugated secondary antibodies for 1 hour at room temperature. Bands were visualized using the chromogenic substrate 5-bromo-4-chloro-3-indolyl phosphate in the presence of nitroblue tetrazolium (SIGMA, USA). The band density was scanned and analyzed using the Odyssey Two-Color Infrared Imaging System (LI-COR, USA).
+ Open protocol
+ Expand
6

Multimodal Approach for B-cell Malignancies

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cetuximab (CTX), RTX, and DARA were provided by the institutional pharmacy. CD19-DE and the appropriate control antibody were generated and produced as previously described.19 (link) VEN was purchased from LC Laboratories, navitoclax (NTX) from Selleckchem, N-benzyloxycarbonyl-Val-Ala-Asp(O-Me) fluoromethyl ketone (Z-VAD-FMK) from MedChemExpress, and AZD5991 from selleckchem. Antibodies for Western blot analyses were from Cell Signaling: apoptosis (#9915) antibody sampler kit, Bcl-2 (Rb, #4223: clone: D55G8), Bcl-2 (M, # 15071, clone: 124), Bim (Rb, #2933 clone: C34C5), Mcl-1 (Rb, #5453), pRB (8516P), Rb (9309). Anti-tubulin antibody was purchased from Abcam (ab15246). Anti-Bim antibody (sc-374358, clone H-5) and anti-p21 (sc-6246, F-5) were from Santa Cruz. Fluorescence-activated cell sorter antibodies were purchased from Beckman Coulter: CD19- fluorescein isothiocyanate (FITC) (A07768), CD20-FITC (A07772), CD38-FITC (A07778), and Biolegend (Annexin V, #640930). Anti-murine macrophages markers F4-80 and CD11b were obtained from Miltenyi.
+ Open protocol
+ Expand
7

Apoptosis Induction in Cancer Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
A1874 was obtained from Hanxiang BioTech (Shanghai, China). Puromycin, JQ1, CPI203, I-BET151, N-acetyl-cysteine (NAC) and pifithrin-α, polybrene and CCK-8 were purchased from Sigma-Aldrich (St. Louis, MO). All cell culture reagents were provided by Hyclone Co. (Logan, UT). Antibodies for c-Myc (#9402), Cyclin D1 (#2922), BRD4 (#13440), Bcl-2 (#15707), Erk1/2 (#9102), p53 (#9282), cleaved-caspase-3 (#9664), cleaved-caspase-9 (#20750), cleaved-poly (ADP-ribose) polymerase (PARP) (#5625), Bcl-2 (#15707) and β-tubulin (#15115) were purchased from Cell Signaling Tech (Beverly, MA). Caspase inhibitors, z-VAD-fmk and z-DEVD-fmk, were provided by Thermo-Fisher (Shanghai, China). Lipofectamine 2000, TUNEL (terminal deoxynucleotidyl transferase dUTP nick end labeling), Annexin V and propidium iodide (PI) were purchased from Thermo-Fisher Invitrogen (Carlsbad, CA). The BrdU ELISA kit was provided by Roche Diagnostics (Basel, Switzerland).
+ Open protocol
+ Expand
8

Western Blot Analysis of Apoptosis Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Briefly, total protein from tumor samples and cell lines was isolated using RIPA lysis buffer (Servicebio, China), and protein concentration was measured by BCA Protein assay kit (Thermo Fisher Scientific, UAS, 1:1000). Western blot analysis of CRHBP (Thermo Fisher Scientific, UAS, 1:1000), P-AKT (Cell Signaling Technology, USA, 1:1000), AKT (Cell Signaling Technology, USA, 1:1000), p-p65 (Cell Signaling Technology, USA, 1:1000), p65 (Cell Signaling Technology, USA, 1:1000), P-IκBα (Cell Signaling Technology, USA, 1:1000), IκBα (Cell Signaling Technology, USA, 1:1000), p-p53 (Cell Signaling Technology, USA, 1:1000), p53 (Cell Signaling Technology, USA, 1:1000), Bax (Cell Signaling Technology, USA, 1:1000), Bcl2 (Cell Signaling Technology, USA, 1:1000), Bcl-2 (Cell Signaling Technology, USA, 1:1000), Bcl-xl (Cell Signaling Technology, USA, 1:1000), Cytochrome c (Cell Signaling Technology, USA, 1:1000), β-actin (Abcam, Cambridge, UK, 1:5000) and GAPDH (Cell Signaling Technology, USA, 1:5000) was according to standard protocols. The blots were scanned with two-color infrared imaging system (Odyssey, LI-COR, USA) after incubating with goat-anti-rabbit secondary body (LI-COR, USA, 1:2000), and analyzed by image J software.
+ Open protocol
+ Expand
9

Autophagy and Apoptosis Pathway Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
BCa cell lines were seeded in six-well plates, and after 24 h of culture, the cells were treated with NA at different dose and time. Western blotting was performed using specific antibodies against, Atg3, Atg5, Atg7, Atg12, beclin 1, LC3A, LC3B (Autophagy antibody sampler kit #4445, Cell Signaling), mTOR (#2972), pmTOR (#2974), p70S6K (#2708), phospho-p70S6K (#9234), BAX (#2772), BCL-2 (#2876), cleaved caspase-3 (#9661), cleaved caspase-9 (#9505), PARP (#9542) and cleaved PARP (#9541) (Cell Signaling), and β-actin (Santa Cruz Biotechnology, Dallas, TX, USA). Protein–antibody complexes were detected with the enhanced chemiluminescence method as described earlier (Suman et al, 2013b (link)).
+ Open protocol
+ Expand
10

Immunoblot Analysis of Cell Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
HCT116 cells were harvested, lysed on ice in RIPA buffer (Beyotime Institute of Biotechnology, Shanghai, China) and boiled. Protein concentration was measured by BCA protein assay kit (Beyotime Institute of Biotechnology, Shanghai, China). The protein samples were separated by SDS-PAGE and transferred to the membrane (Pall, New York, NY, USA). Afterwards, the membrane was immunoblotted with the corresponding primary antibody (C-parp (#5625), C-cas9 (#9505), C-cas3 (#9661), Bcl-2 (#4223), Bax (#5023), SHP2 (#3752), P-Erk1/2 (#9101) and Erk1/2 (#9102), 1:1000, Cell Signaling Technology, Danvers, MA, USA; Tubulin (#ET1602-4), 1:5000, HUABIO, Hangzhou, China) and the appropriate HRP-conjugated secondary antibody, and determined with ECL detection reagent (Thermo Scientific, Waltham, MA, USA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!