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18 protocols using di tert butyl dicarbonate

1

Synthesis and Characterization of Functionalized Polymers

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Di-tert-butyl dicarbonate, triethylamine, N, N-Dimethylethylenediamine, β-Propiolactone, tert-butyl bromoacetate, barium chloride, magnesium sulfate, magnesium chloride hexahydrate, phosphate-buffered saline (PBS; pH 7.4, 10 mM, 138 mM NaCl, 2.7 mM KCl), HEPES buffer, diethyl ether, ethyl alcohol, acetonitrile and dichloromethane (DCM) were obtained from Sigma-Aldrich. 2-chloro-4, 6-dimethoxy-1, 3, 5-triazine (CDMT), N-methylmorpholine (NMM), 1, 3-propanesultone and trifluoroacetic acid (TFA) were purchased from the Alfa Aesar. All the sodium alginates including VLVG (>60% G, 25 kDa MW), SLG20 (>60% G, 75–220 kDa MW), and SLG100 (>60% G, 200–300 kDa MW), were purchased from FMC BioPolymer Co. (Philadelphia, PA). Cyano-functionalized silica was purchased from SiliCycle. Rabbit anti-insulin antibodies (Cat. #ab63820) was purchased from Abcam, and Alexa Fluor 594-conjuaged donkey anti-rabbit igG (Cat. #A-21207) was purchased from Invitrogen. α-smooth muscle actin (SMA) (Cat. #C6198) was purchased from Sigma-Aldrich, and anti-mouse CD68 (Cat. #137012) was purchased from BioLegend. Anti-mouse F4/80 (Cat. MF48000) was purchased from ThermoFisher, and anti-CD11b (Cat. #ab133357) was purchased from Abcam. Anti-mouse Ly-6G/Ly-6C (Cat. #108419) was purchased from BioLegend. Proteome profiler array kit (Mouse Cytokine Array Panel A; Cat. #ARY006) was purchased from R&D Systems.
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2

Biomimetic Hydrogel for Cell Culture

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All chemicals were used as received unless stated otherwise. Sodium hyaluronate (64 kDa) was purchased from Lifecore Biomedical (Chaska, MN). Dowex™ 500WX8–200 ion-exchange resin (AC335341000) was purchased from Fisher Scientific. GelMA (76292–720) and Seakem® Agarose (12002–102) were purchased from VWR. Lithium phenyl-2,4,6-trimethylbenzoylphosphinate (LAP) was purchased from Colorado Photopolymer Solutions (Boulder, CO). Alexa Fluor™ 647 Phalloidin (A22287), LIVE/DEAD™ Viability/Cytotoxicity kit (L3224), and Hoechst 33342 (H3570) were purchased from Thermo Fisher Scientific. Tetrabutylammonium hydroxide (TBA-OH, 86880–100ML), anhydrous dimethyl sulfoxide (276855), 5-norbornene-2-carboxylic acid (446440), 4-(dimethylamino)pyridine (107700), di-tert-butyl dicarbonate (361941), 4-(dimethylamino)pyridine (107700), tetrabutylammonium hydroxide solution (86880), DL-dithiothreitol (D0632), poly(ethylene oxide) (189456), 2-hydroxy-4′-(2-hydroxyethoxy)-2-methylpropiophenone (I2959) (410896), fluorescein isothiocyanate-dextran (average molecular weight 2 MDa, FD2000S-1G) and 3-(trimethoxysilyl)propyl methacrylate (TMSPMA) (440159–500ML) were purchased from Sigma-Aldrich (St. Louis, MO).
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3

In Vitro Hepatic Metabolism Assay

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Taurocholate, chenodeoxycholic acid (CDCA), Hank’s balanced salt solution, rat liver s9 fraction, and di-tert-butyl dicarbonate were purchased from Sigma-Aldrich (St. Louis, Missouri). Dulbecco’s modified Eagle medium (DMEM) and fetal bovine serum (FBS) were obtained from Invitrogen (Rockville, Maryland), [3H]-Taurocholate (10 μCi/mM) was obtained from American Radiolabeled Chemicals, Inc. (St. Louis, Missouri). Benzyl-protected glutamic acid was purchased from Aroz Technologies, LLC (Cincinnati, Ohio) and floxuridine was purchased from Carbosynth (Berkshire, United Kingdom). Other reagents were purchased at the highest purity commercially available.
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4

Synthesis of Functionalized Silica Nanoparticles

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The following compounds were purchased from Sigma Aldrich Inc.: Tetraethyl orthosilicate (TEOS); Ammonium nitrate; Cetyltrimethylammonium bromide (CTAB); 4-Aminobenzyl alcohol (ABA); Phenyl chloroformate; N,N-Diisopropyl- ethylamine (DIPEA); Dibutyltin dilaurate (DBTDL); tert-butanol (tBuOH); Tris(2,2′-bipyridyl)dichlororuthenium(II) hexahydrate (Ru); (3-chloropropyl)triethoxysilane; Di-tert-butyl dicarbonate (BOC2O); Dimethyl sulfoxide (DMSO); N,N-Dimethylformamide (DMF); Tetrahydrofuran (THF); Dichloromethane (DCM). The rest of the chemicals (ethanol, heptane, etc.) were of the best quality and employed as received.
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5

Synthesis and Purification of Polyamines

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D2O, CD3OD, and
CDCl3 were purchased from Goss Scientific
(UK). Aqueous ammonia (32%), dichloromethane (DCM), dimethylformamide
(DMF), ethanol (EtOH), ethyl acetate, methanol (MeOH), and triethylamine
(TEA) were purchased from VWR (UK). Anhydrous pyridine, anhydrous
dimethylformamide (DMF), and chloroform were purchased from Fisher
Scientific (UK). Acrylonitrile, 1,12-diaminododecane, di-tert-butyl dicarbonate [(Boc)2O], ethyl trifluoroacetate,
ninhydrin, norspermine (thermine), Raney-Nickel, spermidine, spermine,
sodium hydroxide (NaOH), succinic anhydride, N,N,N′,N′-tetramethyl-O-(1H-benzotriazol-1-yl)uronium hexafluorophosphate
(HBTu), trifluoroacetic acid (TFA), potassium bromide (KBr), and sodium
sulfate (Na2SO4) were purchased from Sigma-Aldrich
(UK).
Column chromatography was performed over silica gel 60–120
mesh (purchased from Sigma-Aldrich, UK) using different ratios of
MeOH, EtOH, ethyl acetate, DCM, and Aqueous ammonia (32%) as eluents.
Thin-layer chromatography (TLC) was performed over silica gel using
aluminum-backed sheets coated with Kieselgel 60 F254 purchased
from Merck (UK). ninhydrin TLC spray reagent was used for detecting
amine functional groups [ninhydrin (0.2 g) in 100 mL EtOH].
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6

Synthesis of Fluorinated Amine Derivatives

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The following materials and reagents were used for synthesis: silica gel 60 (70–230 mesh) was purchased from Merck GmbH (Darmstadt, Germany), 3-fluoroaniline, (R)-glycidyl butyrate, n-buthyllithium (1.6 M in hexane), sodium azide, triethylamine, methanesulphonyl chloride, trifluoroacetic acid silver salt, thioacetic acid, iodine, tetrakis(triphenylphosphine)palladium(0), 4N hydrogen chloride in 1,4-dioxane and trifluoroacetic acid, propargylamine, 4-formylphenylboronic acid, sodium triacetoxyborohydride, and di-tert-butyl dicarbonate were purchased from Sigma-Aldrich (Steinheim, Germany), 4-methoxybenzyl chloride, benzyl chlorformate were purchased from TCI (Tokyo, Japan), sodium bicarbonate, magnesium sulphate, sodium sulphate, potassium carbonate, sodium chloride, ammonium chloride, hexane, ethyl acetate, methanol, acetone, tetrahydrofuran, hydrochloric acid, ethanol, toluene, dichloromethane, and chloroform were purchased from POCH (Gliwice, Poland) and all were of analytical grade. N,N-dimethylformamide, and acetonitrile were purchased from Rathburn Chemicals (Walkerburn, Great Britain) and were of HPLC grade.
The reference standard of RAD was purchased from ApexBio Technology LLC (Houston, TX, USA).
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7

Synthesis and Characterization of GABA Derivatives

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The following chemicals and drugs were used as obtained from their commercial suppliers: l-menthol, DMAP, GABA (Acros Organics, Geel, Belgium; Darmstadt, Germany), carvacrol, guaiacol, DCC, di-tert-butyl dicarbonate (TCI, Philadelphia, PA, USA), thymol (Sigma-Aldrich, Schnelldorf, Germany). Boc-protected GABA was not obtained commercially and has been synthesized according to the literature procedure [21 (link)]. Structures of the obtained compound were established by 1H-NMR spectroscopy on a AVANCE DRX 500 (500 MHz) instrument (Bruker, Davis, CA, USA) using DMSO-d6 and CDCl3 as solvents and TMS as an internal standard. FAB mass spectrum was obtained on a VG 70-70EQ mass spectrometer (VG Analytical Ltd., Manchester, UK) equipped with Xe ion gun (8 kV); the sample was mixed with m-nitrobenzyl-alcohol matrix. High-resolution mass spectrometry (HRMS) was performed on a 6530 Accurate Mass quadrupole time of flight (Q-TOF) spectrometer (Agilent, Santa Clara, CA, USA) using ESI (electrospray ionization) coupled to an Agilent 1260 Infinity HPLC system. IR spectra were measured with a Frontier FT-IR spectrometer (Perkin-Elmer, Hopkinton, MA, USA) using KBr pellets. The purity and identity of the compound were monitored by TLC on Merck-made (TLC Silica gel 60 F254) plates (Darmstadt, Germany).
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8

Synthesis of Photocatalytic Silica Nanoparticles

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Tetraethyl orthosilicate (TEOS); Pluronic P123 and F127; cetyltrimethylammonium bromide (CTAB); phenyl chlorofor-mate; 4-aminobenzyl alcohol; dibutyltin dilaurate (DBTL); N,N-diisopropylethylamine (DIPEA); tris(2,2′-bipyridyl)-dichlororuthenium(II) hexahydrate (Ru), and di-tert-butyl dicarbon-ate were purchased from Sigma-Aldrich Inc. Solvents (dimethyl sulfoxide (DMSO); tetrahydrofuran (THF); dichloromethane (DCM), N,N-dimethylformamide (DMF); ethanol; heptane; ethyl acetate; methanol) were also purchased from Sigma-Aldrich Inc.
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9

Synthesis of Histamine-Functionalized Polymers

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Ethylenediamine (Sigma-Aldrich, ≥99%), N- [2-(Dimethylamino)ethyl]acrylamide (ChemSupply, >98%), 1,3-Bis(tert-butoxycarbonyl)2-methyl-2-thiopseudourea (Sigma-Aldrich, >98%), 1-Ethyl-3-(3-dimethylaminopropyl)carbodiimide (EDC) hydrochloride (AmBeed, 99%), N-heptylamine (Sigma-Aldrich, 99%), Di-tert-butyl dicarbonate (Sigma-Aldrich, 99%), histamine dihydrochloride (Sigma-Aldrich, 98%) iodomethane (Sigma-Aldrich, >99%), N-hydroxyethyl acrylamide (Sigma-Aldrich, 97%), beta-alanine tertbutylester hydrochloride (Combi-Blocks, 98%), triethylamine (TEA) (Scharlau, 99%), trifluoroacetic acid (TFA) (Sigma-Aldrich, 99%), chloroform (Merck), dichloromethane (DCM) (Merck), tetrahydrofuran (THF)
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10

Synthesis of Functionalized Poly(ethylene glycol)

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Chemicals. All chemicals were used as obtained without additional purification unless otherwise stated. N,N'disuccinimidyl carbonate (DSC, ≥ 95%), poly(ethylene glycol) methyl ether (Mn 5000 Da), 1,8diazabicyclo[5.4.0]undec-5-ene (DBU, 98%), triethylamine (TEA, ≥ 99%), di-tert-butyl dicarbonate (99%), extra-dry DMSO were purchased from Sigma-Aldrich. 2-amino-1,3-propanediol (Serinol, 98%) and dichloromethane (DCM, 99.8%, extra dry over molecular sieve, stabilised, Acroseal) were purchased from AcrosOrganics. Trifluoroacetic acid (TFA, 99%) was purchased from VWR Chemicals. Ethylchloroformate was purchased from Merck KGaA. Cyanine5 amine (Cy-5) was purchased from Lumiprobe Life Science Solutions.
All reactions involving air-sensitive reagents were performed under nitrogen using oven-dried glassware and the syringe-septum cap technique. Anhydrous sodium sulfate (Na 2 SO 4 ) was used as the drying agent for the organic phase. Organic solvents were removed under reduced pressure at 30 °C. All deuterated solvents used for NMR studies were of spectrophotometric grade.
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