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11 protocols using hrp conjugated streptavidin

1

Quantitative ELISA Assay for Protein Detection

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A 50 μl aliquot of cell homogenate proteins (10 μg) in coating buffer (50 mM Tris–HCl [pH 7.4], 150 mM NaCl, 5 mM EDTA, and 5 mM EGTA) was added to each well of a 96-well ELISA plate (Apogent, Portsmouth, NH, USA) and was incubated at 4 °C overnight. To block the coated wells, a 200 μl aliquot of 5% BSA, 0.01% Tween 20, 0.01% SDS in borate-buffered saline (BBS) was added. After an additional 2 h of incubation at 37 °C, the plate was rinsed once with 1% BSA and 0.01% Tween-20 in BBS. To each well, 100 μl of HRP-conjugated streptavidin (Southern Biotech, Birmingham, AL, USA) (1:1000) in 1% BSA and 0.01% Tween-20 in BBS was added, followed by incubation for another 1 h at room temperature (RT). After the wells were rinsed four times with 1% BSA and 0.01% Tween-20 in BBS, the specimen in each well was incubated with 200 μl of TMB substrate (Sigma-Aldrich) for 10–20 min at RT. The reaction was stopped with 50 μl of 3 N HCl, and the absorbance at 450 nm was measured using a microplate spectrophotometer.
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2

Antibody Competition Binding Assay

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Competition ELISAs were performed by inhibition of binding of each biotinylated antibody of interest at the half-maximal binding concentration with a ten-fold molar excess of competitor antibody. HRP-conjugated streptavidin (Southern Biotech) was used for detection. The absorbance value of each antibody against itself is scored at 100% inhibition and comparison of different antibodies was done as a percentage of this 100% inhibition. All competition ELISAs were done in duplicates 2-3 times.
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3

Cell-Based ELISA for PV Antibodies

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Human oropharynx epithelial tumor cell line, UM-SCC-47 (SCC-47), was obtained from Dr. Thomas Carey, University of Michigan. Cell line was grown in 10% FBS-DMEM medium containing 10% heat inactivated FBS, 2 mM L-glutamine, 0.1 mM sodium pyruvate, 0.1 mM non-essential amino acids, and 10 μg/ml gentamicin. A live cell based ELISA was employed using SCC-47 cells seeded in a 96-well flat bottom plate for two days. Serial dilutions of PV IgG1 and IgG4 mAbs and isotype control antibodies were added to the cells for one hour. After washing, bound antibody was detected using biotin-conjugated goat anti-kappa chain antibody (1:5000) (Southern Biotech, Birmingham, AL) for one hour. The plate was washed and HRP-conjugated streptavidin (1:10,000) (SouthernBiotech) was added and incubated for 45 minutes. After a final wash, o-phenylenediamine (OPD) substrate (Sigma, St. Louis, MO) was added, and the plate was incubated for 20 min and read at 490nm.
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4

Biotinylated Influenza HA Probes

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Recombinant HA proteins possessing the Y98F mutation to attenuate sialic acid binding (HA∆SA) were dialyzed into 10 mM Tris-HCl (pH 8.0) and total protein concentration adjusted to ~2 mg/mL after BCA estimation. HA∆SA proteins were biotinylated with biotin protein ligase (BirA) (Avidity Biosciences, La Jolla, CA, USA) following manufacturer recommendations and confirmed by direct ELISA. High binding ELISA plates (CoStar, Washington, DC, USA) were coated overnight with 1 to 10 ng/well of BirA conjugated HA∆SA protein in carbonate buffer (pH 9.4) at 4 °C. ELISA plates were blocked and biotinylated HA∆SA proteins detected with HRP-conjugated streptavidin (Southern Biotech) followed by addition of the ABTS substrate. Biotinylated protein standard and a negative control protein were purchased from Avidity Biosciences (La Jolla, CA, USA; Cat. No. BIS-300). Fluorescently-conjugated HA∆SA probes were generated by stepwise addition of high concentration (1 mg/mL) PE- or APC-conjugated streptavidin (SA-PE or SA-APC) (BioLegend) to a final 8-fold molar excess, in ice-cold PBS with Protease Inhibitor Cocktail Set I (Calbiochem, San Diego, CA, USA; Cat. No. 539131). HA∆SA probes were stored at 4 °C in the dark up to two days.
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5

Quantifying Amyloid-Beta Peptides

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Cortical tissue was homogenized first in PBS containing protease inhibitor (Roche) at 0.5× concentration. Remaining insoluble material was pelleted. Supernatant was collected as the PBS-soluble fraction, and the pellet was resuspended in 5.5 M guanidine and 50 mM Tris, pH 8.0, buffer and further homogenized and incubated on a rotator for 3 h at room temperature. The samples were centrifuged again to pellet insoluble material, and the supernatant was collected as the PBS-insoluble guanidine fraction.
2G3 mAb (Aβ1-40) or 21F12 mAb (Aβ1-42) was coated onto immunosorbent ELISA plates (Thermo Fisher Scientific) overnight at 4°C. Samples were diluted and incubated on plates overnight at 4°C. Sample protein content was also measured by DC protein assay (BioRad). Plates were subsequently incubated with biotinylated 3D6 mAb (both Aβ1-40 and Aβ1-42), followed by HRP-conjugated streptavidin (SouthernBiotech) for 1 h each. Between incubation steps, plates were washed three times with PBS-T. Plates were developed with O-phenylenediamine dihydrochloride substrate (Sigma-Aldrich).
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6

Cadherin Peptide Binding Assay

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Conserved fragments among cadherin proteins were identified by aligning the amino acid sequences of these molecules using Vector NTI (Invitrogen) (Supplementary Fig 1). The peptides corresponding to the homologous regions were synthesized (Genscript, NJ). Competition assays were conducted using these peptides as inhibitors to determine whether a peptide blocks the binding of a mAb to a cadherin protein or LJM11. To test the direct binding of the mAbs to different peptides, we synthesized N-terminal biotinylated peptides (Genscript, NJ) with a linker (GSGSGSGS) between biotin and each peptide. The peptides were solubilized according to manufacturer’s recommendations and diluted in ELISA buffer (Tris buffered saline with 0.05% Tween-20 and 1% BSA). The plates (96-well half-area, Corning) were coated with 20 ng/well of each tested mAbs and incubated overnight. After blocking (1% BSA in Tris buffered saline) and washing, 50 μl of each biotin labeled peptide solution (10 ng/μl) was added to mAb coated plates and incubated for an hour at room temperature. After washing, HRP conjugated streptavidin (SouthernBiotech, AL) was added to each well and incubated for half an hour. After wash, TMB (ThermoFisher) substrate was added to each well and O.D. values determined.
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7

Quantification of Mouse IgG Subclasses

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Plates were coated with goat anti-mouse total IgG antibodies (Jackson labs). Supernatant IgG was detected with AP-conjugated goat anti-mouse IgG1, IgG2b, IgG2c, IgG3 or total IgG (Jackson Immune Research) as indicated. For IFNγ detection, BD OptEIA mouse IFN-γ ELISA Sets (BD) was used according to the manufacturer’s suggestions. To measure antibodies against Friend Virus (FV) ELISA plates were coated with FV lysate prepared as previously described [17 (link)]. Serum IgG was detected with biotin-conjugated goat anti-mouse IgG2c (SouthernBiotech) followed by HRP-conjugated streptavidin (SouthernBiotech).
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8

Optimized Chicken Serum IBV ELISA

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IBV-specific ELISA was performed as previously described [31] (link). Briefly, ELISA plates (Nunc MaxiSorp Immuno Plates; Thermo Scientific) were coated with heat-inactivated IBV (ArkDPI vaccine strain; S AA sequence GenBank #ABY66334) purified as described [31] (link). Individual chicken sera diluted 1:100 were loaded and plates incubated at 4 °C overnight. IBV-specific IgG was detected using biotinylated monoclonal mouse–anti chicken IgG [(clone G-1) Southern Biotechnology Associates, Inc., Birmingham, AL], streptavidin-conjugated HRP (Southern Biotechnology Associates, Inc.) and tetramethylbenzidine (TMB; Invitrogen Corp., Frederick, MD) HRP substrate. Absorbance at 450 nm was measured with a Powerwave XS (BioTek Instruments, Inc., Winooski, VT).
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9

IFN-γ ELISPOT Assay for Mouse T Cells

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B6 and B6.E+ splenic CD4+ T cells were obtained by incubating cells with anti-CD4 microbeads for 30 min. at 4°C and flowing samples through magnetized LS positive selection columns (Miltenyi Biotec). 1.5 × 106 T cells were cultured for 48 h with equal numbers of irradiated Balb/c or SJL splenocytes, 20ng/mL phorbol 12-myristate 13-acetate (PMA) + 1μg/mL ionomycin, or medium only in 96-well MultiScreen-IP plates (Millipore) coated with purified anti-IFNγ (RA-6A2; eBioscience). Plates were then incubated with biotinylated anti-IFNγ (XMG1.2; eBioscience) and streptavidin-conjugated HRP (Southern Biotech), developed with 5-bromo-4-chloro-3-indoyl phosphate/nitro blue tetrazolium (BCIP/NBT; Sigma-Aldrich), read on a CTL ImmunoSpot reader, and analyzed using CTL ImmunoSpot 4.0 (Cellular Technology Limited).
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10

SARS-CoV-2 Spike Protein IgA ELISA

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Purified prefusion SARS-CoV-2 spike antigen (LakePharma) was adsorbed onto 96-well MaxiSorp immuno microplate (Thermo-Fisher). The positive control was a serum pool from three COVID-19 convalescent individuals (Nexelis). Total IgA purified from human serum was used as a standard (Sigma-Aldrich). To generate the IgA standard curve anti-human IgA capture antibodies, Mab MT57 (Mabtech), were absorbed on plates instead of spike antigen. Following incubation, the microplate was washed four times with 250 µL PBST and blocked with 1% BSA in PBST. Purified human IgA standard, controls, or sample dilutions were then added and incubated in the coated microplate to allow binding. The plates were washed and a biotinylated goat anti-human IgA antibody (Mabtech) with cross-reactivity to monkey antibodies was added to all wells. Excess biotinylated anti-IgA antibody was removed by washing and streptavidin-conjugated HRP (Southern Biotech) was added. TMB was added and color development was stopped by addition of stop solution from Invitrogen. The absorbance of each well was measured at 450 nm. The standard total IgA antibody assayed on each test plate was used to calculate the concentration of IgA antibodies against spike protein in the AGM samples expressed in the arbitrary units ELU/mL. The measurements were performed in duplicate and average values are reported with standard deviations.
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