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15 protocols using soluble anti cd28 antibody

1

Tyrosine Kinase Inhibitor Effects on T Cell Proliferation

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Prior to stimulation, purified CD4+CD25+ T cells (1×106 cells/ml) were labeled with vital dye carboxyfluorescein diacetate succinimidyl ester (CFSE; Invitrogen; Thermo Fisher Scientific, Inc.). Subsequently, the cells were cultured in 96-well U-bottomed plates coated with 5 µg/ml anti-CD3 antibody (cat. no. 564001; BD Biosciences, San Jose, CA, USA), 2 µg/ml soluble anti-CD28 antibody (cat. no. 556620; BD Biosciences) and 300 U/ml IL-2 (R&D Systems Inc., Minneapolis, MN, USA) with or without TKI stimulation [500 nM imatinib (Novartis International AG, Basel, Switzerland), 10 nM dasatinib (Bristol-Myers Squibb, New York, NY, USA) or 10 µM nilotinib (Novartis International AG, Basel, Switzerland)]. After 4 days, proliferation was analyzed by flow cytometry (MACSQuant Analyzer 10, Miltenyi Biotec GmbH, Bergisch Gladbach, Germany). Non-stimulated T cells served as a negative control in all of the experiments.
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2

Cytokine Analysis of CD4+ T-cell Activation

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CD4+ T-cells were isolated from total PBMCs by negative selection using EasySep Human CD4 T Enrichment columns (StemCell, Cat #19052). Purity of CD4 was typically >98% as determined by surface staining of CD4+ T-cells with CD3-Pacific Blue (UCHT1) and CD4-Alexa Fluor 700 (RPA-T4), (both from BD) and FACS analysis (BD LSRII analyser). Purified CD4+ T-cells were stimulated with plate-coated anti-CD3 antibody (0.5μg/ml) and soluble anti-CD28 antibody (0.5μg/ml) (both from BD Biosciences, Cat ##555329, 5555726 respectively) for 48 h in the presence or absence of 500 ng IL-32α (BioLegend, Cat # 551004) or IL-32γ (R&D Cat # 4690-IL-025/CF). Secreted cytokines were measured from the supernatant of activated cells using the LEGENDplex™ Human Th Cytokine Panel (13-plex) (BioLegend, Cat # 740001) according to manufacturer’s directions. Infections of PBMCs stimulated with PHA and IL-2 (0.25μg/ml, and 100 units/ml, respectively) or resting cells were carried out using 50 ng of the laboratory strain HIV-BaL per 106 cells by Spinoculation61 (link) (2 hours/Room temperature). Following infection, PBMCs were washed twice by PBS and centrifuged at 1500 rpm for 5 min then were re-suspended in RPMI-1640 medium supplemented with 10% FBS. Cells were kept in culture for 48 h before collection of supernatants and cells for cytokine measures.
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3

Lentiviral Transduction of Activated Mouse CD4+ T Cells

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On day 1, HEK293T cells were transfected with 1 μg of vector plus 0.5 μg of pCL-Eco plasmid (Naviaux et al., 1996 (link)) using X-tremeGene 9 DNA transfection reagent (Roche). On day 2, the media was exchanged with 1 ml fresh T cell media. CD4+ T cells were isolated from the spleens of B6 mice using an EasySep Mouse Naive CD4+ T cell isolation kit (Stemcell Technologies) and cultured in 96-well plates coated with anti-CD3 antibody (10 μg/ml; BD Biosciences) at a density of 1–2 × 106 cells per well in 0.1 ml of T cell media with soluble anti-CD28 antibody (10 μg/ml; BD Biosciences). On day 3, the activated T cells were transferred to 24-well plates at a density of 1–2 × 106 cells per well, washed, and then resuspended in virus-containing supernatants from the HEK293T cell cultures. Polybrene was added to a final concentration of 8 μg/ml. The cell–virus mixture was then centrifuged at 3,500 rpm for 90 min at 32°C to achieve transduction. Following transduction, cells were cultured in 96-well plates coated with anti-CD3 antibody (1 μg/ml) at a density of 5 × 105 cells per well in T cell media with soluble anti-CD28 antibody (1 μg/ml). On the following day, cells were washed and cultured in fresh 96-well plates in T cell media with IL-2 (20 ng/ml) until ready for further analysis.
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4

Regulatory T Cell Immunomodulation Assay

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Tregs from young and old mice were cocultured with DC and Teff in 1:4:2 and 1:4:4 (DC/Teff/Treg) ratios in the presence of anti-CD3 antibody for 72 h. In a separate experiment, Treg from young and old mice were cocultured with Teff from young and old mice at 1:1 ratio in the presence of plate-bound anti-CD3 (1 μg mL−1) and soluble anti-CD28 antibody (1 μg mL−1, BD). After 72 h, conditioned media were collected, and IL-10 concentration was measured by using alpha-ELISA (Perkin Elmer, Waltham, MA, USA) as per manufacturer’s instructions.
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5

CD8+ T Cell Stimulation Protocol

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FACS sorted CD8+ T cells were stimulated with 2 μg/mL immobilized anti-CD3ε (553058: BD Biosciences) and 2 μg/mL soluble anti-CD28 antibody (553295: BD Biosciences) during the first two days. Cells were then maintained in the medium supplemented with 20 U/ml rIL-2 (11271164001: Roche) for additional days.
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6

Modulation of Th1 Cell Function by sCD137

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Splenic CD4 T cells (1 × 106) isolated from 10-week-old prediabetic female NOD mice were stimulated with plate-bound anti-CD3 antibody (3 μg/ml, clone: 145-2C11, BD Biosciences, USA) and soluble anti-CD28 antibody (3 μg/ml, clone: 37.51, BD Biosciences) in the presence of recombinant mouse IL-12 (10 ng/mL, TONBO Biosciences), recombinant mouse IL-2 (5 ng/mL, Invitrogen, USA), and anti-IL-4 antibody (10 μg/ml, clone: 11B11, BD Biosciences, USA) in 12-well culture plates. After 5 days, cells were harvested and washed, and 1 × 106 differentiated Th1 cells were treated with plate-bound anti-CD3 antibody (1 μg/ml) and soluble anti-CD28 antibody (1 μg/ml) in the presence or absence of recombinant sCD137 (240 μg/mL) for 24 h. In some wells, recombinant mouse IL-2 (25 U/ml) was added. After 24 h, cells were washed and rested in fresh TCM without IL-2 for 48 h; 0.5 × 105 rested living cells were restimulated with plate-bound anti-CD3 antibody (0.5 μg/ml) and soluble anti-CD28 antibody (0.5 μg/ml) for 24 h. Supernatant was collected, and IL-2 concentration was measured by ELISA.
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7

Treg-Mediated Immune Regulation Across Ages

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Tregs from young and old mice were co-cultured with DC and Teff in 1:4:2 and 1:4:4 (DC:Teff:Treg) ratios in the presence of anti-CD3 antibody for 72 h. In a separate experiment, Treg from young and old mice were co-cultured with Teff from young and old mice at 1:1 ratio in the presence of plate bound anti-CD3 (1 μg/ml) and soluble anti-CD28 antibody (1 μg/ml, BD). After 72h, conditioned media were collected and IL-10 concentration was measured by using alpha-ELISA (perkin elmer) as per manufacturer’s instructions.
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8

Isolation and Activation of CD4+ and CD8+ T Cells

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Peripheral blood mononuclear cells (PBMC) were isolated from healthy donors’ and MS patients’ blood collected in EDTA-coated tubes using Ficoll density gradient as routinely performed [25 (link), 26 (link)]. CD8+ T lymphocytes were first isolated using CD8 Microbeads (Miltenyi Biotec), while the negative fraction devoid of CD8+ T lymphocytes was used to isolate CD4+ T lymphocytes using CD4 Microbeads (Miltenyi Biotec) according to the manufacturer’s instructions. Purity was > 95% for both T cell subsets; a representative flow cytometry analysis of isolated CD4 and CD8 T lymphocytes is shown in Additional file 1: Fig. S1. CD4+ and CD8+ T lymphocytes cultured in complete Iscove medium (containing FBS 10%, sodium pyruvate 1 mM, L-glutamine 2 mM, MEM nonessential amino acids 1%, β-mercapto-ethanol 1 µM, and antibiotics) were activated for 5 days on plate-bound anti-CD3 (OKT3 clone, eBioscience-Life technology, 2.5 μg/mL for CD4+ T cells and 5 μg/mL for CD8+ T cells) in the presence of soluble anti-CD28 antibody (BD Biosciences, 1 µg/mL). After five days, activated CD4+ or CD8+ T lymphocytes were harvested for co-culture experiments.
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9

Measuring IFNγ in CD8+ T Cells

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To measure IFNγ in CD8+ T cells, ICS was restricted to detection of IFNγ (a cytokine produced by CD8+ cells upon activation (23 (link)). Cells from spleens, lymph nodes, or TILs isolated from 4T1 tumor-bearing BALB/c mice were isolated and single cell suspensions prepared as described. Cells were then seeded into U-bottom 96-well plates precoated with 5 μg/ml anti-CD3 antibody, in RPMI media containing 10% FBS and soluble anti-CD28 antibody (Clone: 37.51. BD Biosciences, 2 μg/ml). Cells were incubated at 37°C overnight in 5% CO2. Brefeldin A (10 μg/ml) was added to retain secretion of IFNγ in the Golgi apparatus. After 3 h, cells were stained with extracellular markers including anti-mouse PerCP-Cy5.5 CD8a (clone 53-6.7) MAb and anti-mouse PE-Cy7 CD5 (clone 53-6.7) MAb, (Biolegend, San Diego, CA)(1 μg/ml in 50 μl FACS buffer) on ice and incubated in the dark for 30 min. The samples were washed twice and fixed in 2% paraformaldehyde (50 μl). To detect CD8+ T cell activation, samples were stained for 60 min with anti-mouse PE-IFN-γ clone (XMG1.2) (1 μg/ml in intracellular staining permeabilization wash buffer) (Biolegend, San Diego, CA). Samples were then washed and harvested in FACS buffer for flow cytometry. Flow cytometric data were analyzed using Flowjo software (BD Bioscience).
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10

CFSE-Labeled CD4+ T Cell Activation

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Sorted CD4+ T cells were labeled with CFSE (ThermoFisher Scientific) and were cultured in custom ordered Dulbecco’s Modified Eagle Medium (D-MEM, KOHJIN BIO) supplemented with 10% heat inactivated FBS (Hyclone). 2.0 × 105 cells were stimulated in 96-well flat-bottomed plate, which was pre-coated with 2 μg ml−1 anti-CD3e antibody (553068, BD Bioscience) and 2 μg ml-1 soluble anti-CD28 antibody (553295, BD Bioscience), for two days, and were maintained in D-MEM supplemented with 10 ng ml-1 recombinant mouse IL-2 (402-ML, R&D system) for 2 to 4 days.
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