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2 protocols using truestain fcx antibody

1

Comprehensive Immune Cell Profiling

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Prior to fluorochrome staining, FcRIII/II blocking was performed using the TrueStain fcX™ antibody (Biolegend, London, UK). Cell surface staining was done with anti-CD3 (clone 145-2C11), anti-CD4 (clone GK1.5), anti-CD8 (clone 53–6.7), anti-CD11b (clone M1/70), anti-CD11c (clone N418), anti-CD19 (clone 6D5), anti-CD26 (clone H194–112), anti-CD45 (clone 30-F11), anti-CD69 (clone H1.2F3), anti-CD172a (clone P84), anti-CD206 (clone C068C2), anti-EpCAM (clone G8.8), anti-F4/80 (clone BM8), anti-Ly6C (clone HK1.4), anti-Ly6G (clone 1A8), anti-MHC-I (clone AF6–88.5), anti-MHC-II (clone AF6–120.01), anti-NK1.1 (clone PK136), anti-PD-1 (clone 29F.1A12), anti-PD-L1 (clone 10F.9G2), anti-CD86 (clone GL-1), anti-CD40 (clone 3/23), anti-XCR1 (clone ZET; all BioLegend, London, UK) and anti-CD204 (clone 2F8, Biorad, Munich, Germany) antibodies, and Fixable Viability Dye (Thermo Fisher Scientific, Karlsruhe, Germany) was used to exclude dead cells. The gating strategy is depicted in Additional file 1: Figure S1. Intracellular staining was done for arginase-1 (Polyclonal Sheep IgG; R&D Systems, Minneapolis, USA) using the eBioscience™ FoxP3/Transcription Factor Staining Buffer Kit (Thermo Fisher Scientific, Karlsruhe, Germany). Data were acquired on a BD LSRFortessa system (BD Bioscience, Heidelberg, Germany) and analyzed with FlowJo X software (FLOWJO LLC, Ashland, OR, USA).
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2

Comprehensive Immune Cell Profiling of Mouse PBMCs

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Mouse PBMCs were incubated with True Stain FcX antibody (clone 93, BioLegend) in PBS with 2% FBS before staining with antibodies directly conjugated to fluorophores. Cells were divided into two tubes to stain for myeloid markers (CD11b, CD11c, Ly6C, Ly6G, MHC I, MHC II) or lymphoid markers (CD3, CD4, CD8, CD19, c-kit). Antibodies are summarized in Supplementary Table 2. DAPI was used to exclude dead cells from analysis. Cells were washed and strained through a 40 μm filter (BD Falcon, 352340) after staining and analyzed on a BD LSRII flow cytometer. AbC Total Antibody Compensation Bead Kit (Thermo Fisher, A10513) was used for single color compensation. Flow cytometry data were then analyzed using FlowJo software (version 10.8.0, Becton Dickinson) to quantify the frequency of cells positive for each marker; the gating strategy is outlined in Supplementary Fig. 6. Lymphoprep centrifugation is selective for T, B, NK, and monocyte populations and excludes granulocytes, consistent with the observed low abundance of those myeloid markers (e.g., Ly6G+) in the cells analyzed. Percentages (SAFE, FLOW) of positive cells for each marker are c-Kit (0.5%, 0.9%), CD8 (13.7%, 13.1%), CD11c (2.1%, 3.2%), CD19 (66.9%, 55.8%), CD45 (98.6%, 99.1%), CD11b (6.5%, 11.9%), CD4 (16.2%, 9.9%), CD3 (30.8%, 25%), MHCII (72.3%, 66.1%), MHCI (22.1%, 23.7%), Ly6G (0.0%, 0.2%), Ly6C (11.6%, 7.7%).
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