Thermodynamic dissociation constants and quantum yield measurements for HMBR or HBR-3,5DOM were determined as previously described using either FAST:HMBR or FAST:HBR-3,5DOM as a reference7 (link)–9 (link). Thermodynamic dissociation constants were determined with a Spark 10M plate reader (Tecan) and fit in Prism 6 to a one-site specific binding model. Quantum yield measurments were determined by reciprocal dilution with protein solution so as to keep the protein concentration constant at 40 μM and varying the concentration only of the protein:fluorogen complex. Absorption coefficients were determined by forward titration of fluorogen into a 40 μM protein solution using FAST as standard for the concentration of the fluorogen solution. Spectra were processed in Spectragryph 1.2.
Cary 300 uv vis spectrometer
The Cary 300 UV–vis spectrometer is a laboratory instrument designed to measure the absorption or transmission of light in the ultraviolet and visible regions of the electromagnetic spectrum. It is capable of performing a wide range of spectroscopic analyses on various sample types.
Lab products found in correlation
10 protocols using cary 300 uv vis spectrometer
Spectroscopic Characterization of Fluorogenic Proteins
Spectroscopic Characterization of Fluorogenic Proteins
Thermodynamic dissociation constants and quantum yield measurements for HMBR or HBR-3,5DOM were determined as previously described using either FAST:HMBR or FAST:HBR-3,5DOM as a reference7 (link)–9 (link). Thermodynamic dissociation constants were determined with a Spark 10M plate reader (Tecan) and fit in Prism 6 to a one-site specific binding model. Quantum yield measurments were determined by reciprocal dilution with protein solution so as to keep the protein concentration constant at 40 μM and varying the concentration only of the protein:fluorogen complex. Absorption coefficients were determined by forward titration of fluorogen into a 40 μM protein solution using FAST as standard for the concentration of the fluorogen solution. Spectra were processed in Spectragryph 1.2.
Paclitaxel Loading in ADAM9-MSNs
Spectroscopic Quantification of CYP-Mediated NADPH Oxidation
NADPH oxidation was
measured using kinetics mode in a Cary 300 UV–vis spectrometer
(Agilent Technologies). 0.2 μM (final concentration) of CYP
was taken in 0.1 M potassium phosphate buffer (pH 7.4) and incubated
with 0.6 μM (final concentration) of CPR for 5 min with a reaction
volume of 400 μL. The reaction was initiated with 200 μM
of NADPH, and the absorption change was monitored over 10 min at 340
nm. The rate of NADPH consumption (or NADPH to NADP+ conversion)
was calculated by taking the molar extinction coefficient as 6.22
mM–1 cm–1 at 340 nm. To estimate
the change in NADPH oxidation in the presence of CBC, both CYP and
CPR were further incubated using CBC (final concentration 50 μM)
for 5 min followed by measuring the change in absorbance at 340 nm
as discussed earlier.
Thermodynamic Characterization of NFAST-CFAST Interactions
Thermodynamic dissociation constants for NFAST:CFASTn (n = 8–11) couples were determined using peptides synthesized for CFASTn (n = 8–11) and recombinantly purified NFAST. The affinity for NFAST:CFAST11 in the presence of 10 µM HMBR was determined independently from a minimum of three different purifications of NFAST. NFAST:CFAST11 was then run in parallel as an internal control for the determination of the other NFAST-CFAST combinations, which were all performed on the same day with the same preparation of NFAST. Thermodynamic dissociation constants were determined with a Spark 10M plate reader (Tecan) and fit in Prism 6 to a one-site-specific binding model.
Characterization of MXene and AgNWs
Evaluating Drug Delivery Efficiency with LiHCl and Thp
For each drug, a concentration measurement was carried out to correlate the absorption value with the solution concentration using the Cary 300 UV-Vis spectrometer (Agilent Technologies, Santa Clara, CA, USA). Four concentrations of drug solutions were prepared with 0.1 N HCl and the absorption values were recorded. The standard concentration curves of LiHCl and Thp are shown in
CYP2C8 Variant NADPH Consumption
Analytical Techniques for Chemical Characterization
were obtained on an Agilent Technologies Cary 300 UV–vis spectrometer.
NMR spectroscopy was carried out at 25 °C on a Bruker 500 MHz
spectrometer equipped with a Prodigy cold probe (1H, 13C, 1H–13C multiplicity edited
HSQC, 1H–1H COSY, 13C–13C COSY, 1H–13C HMBC, 1H–15N HMBC, 13C INADEQUATE, and TOCSY)
or on a Varian Inova 600 MHz spectrometer equipped with a 1H, 13C, 15N triple resonance inverse detection
probe (1H with or without 13C, 15N, or 13C/15N decoupling, and 1H–15N HMBC with or without 13C decoupling). Spectra
were collected in DMSO-d6 or D2O. Spectra were
indirectly referenced by the residual solvent peak or 2H lock. MS analysis was carried out on a Waters Xevo G2-XS QTof with
positive mode electrospray ionization coupled to an AQUITY UPLC H-Class
system with a Waters BEH C18 column. Gbt samples were run with a linear
gradient of 0 to 100% acetonitrile (0.1% formic acid) in ddH2O (0.1% formic acid) over 10 min. Deionized water was dispensed from
a Milli-Q IQ 7000 water purification system (Resistivity 18.2 MΩ).
All glassware was acid-washed with 4 M HCl and subsequently rinsed
with Milli-Q water.
Spectroscopic Characterization of Tistrellabactin
were obtained on an Agilent Technologies Cary 300 UV–vis spectrometer.
NMR spectroscopy was carried out at 25 °C on a Bruker 500 MHz
spectrometer equipped with a Prodigy cold probe (1H, 13C, 1H–13C multiplicity edited
HSQC, 1H–1H COSY, 1H–13C HMBC, 1H–15N HMBC, 1H–15N HSQC, TOCSY, NOESY). NMR spectra for characterization
were collected in DMSO-d6, and spectra
of the photoproduct were collected in 50 mM Na2HPO4-buffered D2O (pD 8.0). Spectra were indirectly
referenced by the residual solvent peak or 2H lock. MS
analysis was carried out on a Waters Xevo G2-XS QTOF with positive
mode electrospray ionization coupled to an AQUITY UPLC-H-Class system
with a Waters BEH C18 column. Samples were run with a linear gradient
of 0% to 100% acetonitrile (0.1% formic acid) in ddH2O
(0.1% formic acid) over 10 min. IR data were collected on a Bruker
Alpha FTIR spectrophotometer. CD data were collected on a JASCO J-1500
CD spectrometer on tistrellabactin A (71 μM) and tistrellabactin
B (52 μM) in Na2HPO4 (pH 8). CD data was
referenced to the buffer and collected with a scan rate of 20 nm/min,
DIT 8 s bandwidth of 1 nm, and data pitch of 0.5 nm. Deionized water
was dispensed from a Milli-Q IQ 7000 water purification system (Resistivity
18.2 MΩ). All glassware was acid-washed with 4 M HCl and subsequently
rinsed with Milli-Q water.
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