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13 protocols using edu imaging kit

1

Galangin Inhibits Cell Proliferation

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MGC 803 cells were plated at a density of 8.0 × 104 cells/ml on a 96-well plate and allowed to adhere to plates overnight. EdU staining was carried out using the EdU imaging kit (RiboBio Co., China). Briefly, cells treated with galangin (20 μM) were first labeled with 50 μM EdU at 37°C for 2 h. Subsequently, they were fixed with 4% PFA for another 30 min, and incubated with 1 × PBS solution containing 0.5% Triton X-100 for 10 min. After washed with 1 × PBS solution, the cells were incubated with 100 μL dying solution for 30 min in the dark. Finally, the nuclei were stained with Hoechst 33342 solution for another 30 min. Fluorescent images were captured by fluorescence microscopy (IX81). Data were analyzed by using ImageJ software.
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2

Cell Viability and Proliferation Assays

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Cells were cultured on a 96-well plate and transfected with siRNAs or mimics for various times. Cell viability was then measured by the CCK-8 kit (Beyotime Biotechnology, Shanghai, China) according to the manufacturer’s instructions. For CCK8 assay, 1000 per well cells were seeded into 96-well plates 24–48 h after transfection and the absorbance were detected by microplate reader at 450 nm. Cell proliferation capacity was evaluated by 5-ethynyl-2'-deoxyuridine (EdU) incorporation assay. EdU is a thymidine analogue that can be inserted into the replicating DNA instead of thymidine (T) during cell proliferation. The fluorescent dye Apollo® binds specifically to EdU which has inserted into DNA and could be detected by excitation light at 488 nm. Green light represents the growing cell. Hoechst stained cell nuclei represent the total number of cells. In EdU incorporation assay, 1 × 104–1.5 × 104 cells were seeded into 96-well plates 24 or 48hplates 24 or 48 h after transfection and the next steps were following the manufacturer’s protocol of EdU Imaging Kit (Ribobio, China), the fluorescent images were acquired by the fluorescence microscope (Olympus, Japan). All the experiments were performed for at least three times.
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3

Detecting DNA Synthesis in PTC Cells

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EdU assay was used to detect the DNA synthesis of growing PTC cells by using the EdU imaging kit (RiboBio, China), and the EdU assay steps were performed following the manufacturer’s instructions.
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4

Cell Proliferation Analysis via EdU Staining

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EdU staining was conducted using an EdU imaging kit (RiboBio) according to the manufacturer's protocol. Cells were seeded on 96‐well plants overnight and then were incubated in medium containing 50 μM EdU for 3 h. After incubation, cells were subjected to EdU staining using Cell‐Light EdU Apollo567 In Vitro Kit (Ribobio) in accordance with its manuals. Images were captured with a Nikon Eclipse 300 fluorescence microscope (CompixInc).
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5

Cell Proliferation and Colony Formation

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EdU Imaging Kit (RiboBio) was used to test the cell proliferation capacity, and the specific procedures were strictly in accordance with the instruction of the Kit. Meanwhile, colony formation assay was used to determine the ability of cell clone formation.
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6

Quantifying Cell Proliferation via EdU Staining

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Cells were seeded in 24-well plates and cultured to 50% density for transfection. Cells were fixed and stained with a 5-ethynyl-20-deoxyuridine (EdU) imaging kit (RiboBio, China) according to the manufacturer’s protocol. A fluorescence microscope (DMi8; Leica, German) was used to capture three randomly selected fields to visualize the number of EdU stained cells.
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7

Quantifying Cellular Proliferation with EdU

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According to the manufacturer's instructions of the EdU imaging kit (RiboBio), LUAD cells were hatched with EdU solution and DAPI solution. Fluorescent images were captured and EdU positive cell rate was counted under fluorescence microscopy.
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8

Dihydroartemisinin-induced Lysosomal Dysfunction

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Dihydroartemisinin was obtained from Ourchem (Sinopharm Chemical Reagent Co, Ltd, China). Dimethyl sulfoxide (DMSO), cisplatin, acridine orange (AO), deferoxamine (DFO), N-acetyl-L-cysteine (NAC), and ferric ammonium citrate (FAC) were purchased from Sigma (USA). CCK-8 kit was obtained from Dojindo (Japan). EdU Imaging Kit was bought from Ribobio (China). Lysosome Staining Kit was obtained from Abnova (USA). Lysotracker probe and Mito-tracker Red probe were procured from Beyotime (China). ROS Kit and JC-1 kit were acquired from Beyotime (China). AO/EB Staining Kit was obtained from Senbeijia (China). Primary antibodies for rabbit polyclonal to LC3B (Abcam, ab48394), rabbit monoclonal to Cathepsin B (Abcam,ab125067), mouse monoclonal to GAPDH (Abcam, ab8245), SQSTM1/p62 mouse mAb(Cell Signaling Technology,#8588), ATG5 rabbit mAb (Cell Signaling Technology,#12994), ATG12 rabbit mAb (Cell Signaling Technology,#4180), ATG14 rabbit mAb (Cell Signaling Technology,#96752), Erk1/2 rabbit mAb(Cell Signaling Technology,#4695), p-Erk1/2 rabbit mAb (Cell Signaling Technology,#8544), p38 MAPK rabbit mAb (Cell Signaling Technology,#14451), p-p38 rabbit mAb (Cell Signaling Technology,#4631), SAPK/JNK rabbit mAb (Cell Signaling Technology,#9252), Phospho-SAPK/JNK Rabbit mAbp-JNK (Cell Signaling Technology,#4668), were used according to the protocol.
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9

Apoptosis and Proliferation Analysis of OGCs

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Cell apoptosis were evaluated by flow cytometry analysis utilizing Annexin V-FITC/PI apoptosis detection kit (BB-4101, Bestbio, China). In short, OGCs were harvested and washed, and then stained with Annexin V-FITC and PI in the darkroom, followed by flow cytometry, and analyzed using Flow Jo 7.6 software.
Cell proliferation was assessed by EDU incorporation assay with an EDU imaging kit (C10310-1, RiboBio, China), as described in our previous study [9 (link)]. In short, EDU reagent was added to OGCs in each well for 2 h incubation, followed by fixation, permeabilization, EDU staining, and DAPI counterstaining. The results of proliferation rate were analyzed by the percentage of EDU-stained OGCs to DAPI-stained OGCs.
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10

EdU Staining of Proliferating Cells

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EdU staining was conducted using an EdU imaging kit (RiboBio) according to the manufacturer’s protocol. Briefly, hDPCs were seeded on coverslips overnight followed by serum starvation. Then, cells were released from deprivation in complete growth medium for 24 h, during which an EdU pulse was applied for 3 h at a concentration of 50 μM. After labelling, cells were stained with EdU. For double staining with other antigens, additional immunohistochemical staining was performed following EdU staining before the nuclei were stained with DAPI. Images were captured with a Nikon Eclipse 300 fluorescence microscope (CompixInc).
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