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N methoxysuccinyl ala ala pro val 7 amido 4 methylcoumarin

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N-methoxysuccinyl-Ala-Ala-Pro-Val-7-amido-4-methylcoumarin is a synthetic chemical compound used as a fluorogenic substrate for the detection and measurement of enzymatic activity, particularly in the context of protease research. It functions as a sensitive and specific tool for the analysis of protease-mediated cleavage events.

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6 protocols using n methoxysuccinyl ala ala pro val 7 amido 4 methylcoumarin

1

Neutrophil Extracellular Traps Quantification

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Neutrophils (8 × 106) were incubated with live or paraformaldehyde-fixed promastigotes of L. amazonensis in a 1:0.1 neutrophil:parasite ratio or LPS (Escherichia coli O55:B5) 100 ng/mL at 35°C in 5% CO2. After 3 h incubation, supernatant was collected and aliquots were kept at −80°C until use. The quantification of NETs were performed with the Picogreen dsDNA kit (Invitrogen, Life Technologies), as already described (15 (link)). The NETs-enriched supernatants were treated with DNase (10 U/mL; Fermentas Life Science) or with the elastase inhibitor MeOSuc-AAPV-cmk (10 µg/mL, Calbiochem) for 30 min and then added to monocytes. In some cases, NETs were filtered through a 0.22 µm pore filter to remove the NET scaffold.
The quantification of the elastase in the supernatants was performed as described (18 (link)). Briefly, 50 µL of NETs-enriched supernatants were incubated with the fluorogenic substrate N-methoxysuccinyl-Ala-Ala-Pro-Val-7-amido-4-methylcoumarin (0.25 mM; Sigma-Aldrich). After 1 h at 37°C, the fluorescence was measured in a SpectraMax Paradigm reader (Molecular Devices) at 365–450 nm. A standard curve with recombinant elastase was used to determine the concentration of elastase in the NETs-enriched supernatants.
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2

Neutrophil Elastase Activity Assay

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Neutrophil elastase (NE) activity was measured as described in (36 (link)). Briefly, 50 μL of medium supernatant was collected after 24 h culturing of neutrophils in the presence or absence of PP13 (3 μg/ml), then incubated with the elastase substrate N-methoxysuccinyl-Ala-Ala-Pro-Val-7-amido-4-methylcoumarin (0.25 mM, Sigma) in PBS for 30 min at 37°C, 5% CO2 in the dark. The reaction product was analyzed at 360/455 nm.
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3

Fluorogenic HNE Activity Assay

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HNE concentration was measured in 50 µl of supernatant using the fluorogenic substrate N-methoxysuccinyl-Ala-Ala-Pro-Val-7-amido-4-methylcoumarin (Sigma) at a final concentration of 0.25 mM (100 µl final reaction volume). The assay buffer was 50 mM HEPES buffer, pH 7.4, 100 mM NaCl, 0.01% Triton X-100. After 1 h incubation at 37°C, the substrate hydrolysis was measured in a Spectramax Gemini XPS fluorescence microplate reader (Molecular Devices, Menlo Park, CA) with 365/450 nm excitation/emission wavelengths. HNE concentration was determined by using a standard curve of serial dilutions of purified HNE (Elastin Products Company, Inc., Owensville, MO).
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4

Elastase Activity Assay for NETs

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Supernatants (25 μL) obtained from early NET induction protocol were incubated with the elastase substrate, N-methoxysuccinyl-Ala-Ala-Pro-Val-7-amido-4-methylcoumarin (0.25 mM, Sigma) in buffer (50 mM HEPES, 100 mM NaCl and 0.01% Triton X-100) for 30 min at 37 °C, 5% CO2 protected from light. The reaction product was analyzed at 360/455 nm.
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5

Enzymatic Activity Assays for Tissues

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Ten micrograms of total protein from fresh tissue lysates was directly used to determine T-synthase activity using UDP-Gal (Sigma-Aldrich) as the donor and GalNAc-α-4-methylumbelliferyl (GalNAc-α-4-MU) (Carbosynth, Compton, UK) as the acceptor25 (link). O-Glycosidase (New England Biolabs, Frankfurt am Main, Germany) was used for T antigen cleavage and release of fluorescent 4-MU. Fluorescence was measured (ex 355 nm/em 460 nm) in black OptiPlate-96 F plates (PerkinElmer, Waltham, MA, USA) in a FLUOstar Omega (BMG Labtech, Ortenberg, Germany). One microgram of total protein from fresh tissue lysates was directly used to determine lipase activity using 4-methylumbelliferyl butyrate (19362, Sigma-Aldrich) or pancreatic elastase using N-methoxysuccinyl-Ala-Ala-Pro-Val-7-amido-4-methylcoumarin (M9771, Sigma-Aldrich) as substrate. Fluorescence was measured (ex 355 nm/em 460 nm) after 30 min.
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6

Serum Elastase, Peroxidase, and MMP-9 Assay

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Serum was diluted 1:4 in buffer (50 mM HEPES, 100 mM NaCl and 0.01% Triton X-100) and elastase activity was measured with the fluorogenic substrate N-Methoxysuccinyl-Ala-Ala-Pro-Val-7-amido-4-methylcoumarin (Sigma-Aldrich, St. Louis, USA) according to manufacturer’s instructions. Serum was diluted 1:5 in PBS 0.5% Hexadecyltrimethylammonium bromide (5 mg/ml) and peroxidase activity was measured using 3,3′,5,5′-Tetramethylbenzidine (Sigma) after incubation for 1 h at 35 °C. Absorbance was detected on a SpectraMax® Paradigm® microplate reader at 630 nm (Molecular Devices, California, USA). Quantification of serum MMP-9 was performed with Human MMP-9 Quantikine ELISA kit (R&D Systems, Minneapolis, USA) according to instructions provided by the supplier.
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