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6 protocols using anti cd3 pacific blue clone ucht1

1

Sorting of CD56+ T, NK Cells

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PBMCs were stained with anti-CD3 Pacific Blue (clone UCHT1, BD Biosciences), anti-CD56 PE-Cy7 (clone B159, BD Biosciences) for 30 min at room temperature. CD56+ T cells, CD56+ NK cells and CD56− T cells were sorted by BD FACS AriaIII (BD Biosciences, San Jose, CA) and only cells with purity >95% were used in subsequent experiments.
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2

Intracellular Cytokine Profiling of SARS-CoV-2 Specific T Cells

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To evaluate intracellular cytokine production, PBMC were stimulated with PepMix peptide pools of spike glycoprotein, NCAP and VME1 (1 μg of each peptide pool/mL) overnight at 37°C, 5% CO2 in the presence of brefeldin A at 10 μg/mL (BD Biosciences). PBMC cultured with medium alone or PMA/IONO were used as negative and positive controls, respectively. After the stimulation, PBMC were washed and stained for 20 min at 4°C in PBS with antibodies following an additional staining with Fixable viability Dye (FvD)-eFluor 506 (eBioscience) for 10 min at 4°C. T cell phenotype was investigated performing surface staining with anti-CD3-Pacific Blue (clone UCHT1; BD), anti-CD4-Alexa Fluor 488 (clone RPA-T4; Biolegend), anti-CD8-PE-Cy7 (clone SK1; Biolegend), antibodies. Then, PBMC were permeabilized and fixed with the Cytofix/Cytoperm kit according to the manufacturer's instructions (BD Biosciences). Intracellular staining was performed using anti-IFN-γ APC (clone 4S.B3; Biolegend), anti- TNF-α APC AF700 (clone IPM2, Beckman Coulter), anti-IL-2 PE (clone MQ1-17H12, Biolegend) antibodies for 30 min at 4°C. Samples were directly acquired on a Cytoflex (Beckman Coulter) and analyzed with Kaluza software.
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3

Characterization of Human iNKT Cells

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Human peripheral invariant NKT (iNKT) cells were characterized as CD3+ T cells expressing a specific TCR (Vα24-Jα18-Vβ11). To identify iNKT cells, PBMCs were surface-stained with anti-CD3 Pacific Blue (clone UCHT1, BD Biosciences) and anti-Vα24-Jα18 FITC (clone 6B11, BD Biosciences). CD3+ Vα24-Jα18+ double positive cells were defined as iNKT cells. To detect CD16, CD161 and CD69 expression on iNKT and CD56+ T cells, PBMC were surface-stained with anti-CD3 Pacific Blue, anti-Vα24-Jα18 FITC (clone 6B11), anti-CD56 PE-Cy7 (clone B159), anti-CD16 (clone eBioCB16, eBioscience), anti-CD161 (clone DX12, BD Biosciences) and anti-CD69 (clone FN50, BD Biosciences). Samples were analyzed on BD FACS Fortessa (BD Biosciences, San Jose, CA, USA) and the frequencies of CD16+ or CD32+ cells in CD56+ T cells, CD56+ NK cells and CD56− T cells were calculated and compared.
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4

Antibody-Dependent Cell-Mediated Cytotoxicity Assay

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The nonspecific ADCC assay was performed as previously described, in which the mouse mastocytoma cell line P815 was used as target cells [27 (link)]. Briefly, PBMC were stimulated with P815 cells alone or P815 cells/P815-specific Abs (P815/Abs) complex (1:100 dilution of polyclonal rabbit anti-mouse lymphocyte serum, Accurate Chemical & Scientific Corp., Westbury, NY) at an E:T ratio of 10:1. Brefeldin-A (10 μg/ml, Sigma, St Louis, MO, USA), GolgiStop (5 μg/ml, BD Biosciences) and anti-CD107a PE-Cy5 (clone H4A3, BD Biosciences) were added immediately to cell medium and incubated for 6 h. Cells were fixed by 2% PFA and stained with anti-CD3 Pacific Blue (clone UCHT1), anti-CD56 PE-Cy7 (clone B159), anti-CD16 APC-Cy7 (clone 3G8), anti-CD4 PE (clone RPA-T4), anti-CD8 APC (clone RPA-T8), and anti-IFNγ FITC (clone 25,723.11). To evaluate the response time of antibody-dependent response mediated by CD56+ T and NK cells, PBMC were cocultured with P815/Abs for 2, 4 and 6 h and fixed and stained as above. All data were acquired on BD FACS Fortessa (BD Biosciences, San Jose, CA, USA) and analyzed by FlowJo software (Treestar, Ashland, OR, USA).
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5

Isolation and characterization of plasmablasts

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Fresh peripheral blood mononuclear cells were stained with fluorescent-labelled antibodies including Pacific blue anti-CD3 (clone UCHT1, catalogue number 558117, BD) (5 μg/ml), fluorescein isothiocyanate anti-CD19 (clone HIB19, catalogue number 555412, BD) (1:10 dilution in a 100 μl experimental sample), phycoerythrin-Cy7 anti-CD27 (clone M-T271, catalogue number 560609, BD) (1:20 dilution in a 100 μl experimental sample), allophycocyanin-H7 anti-CD20 (clone L27, catalogue number 641396, BD) (5 μg/ml) and phycoerythrin-Cy5 anti- CD38 (clone HIT2, catalogue number 555461, BD) (1:10 dilution in a 100 μl experimental sample). CD3negCD20negCD19posCD27hiCD38hi plasmablasts were gated (Supplementary Fig. 14a) and sorted as single cells. Heavy and light chain variable domains of single plasmablasts were cloned into their respective vectors and supernatants were collected from 293T cells co-transfected with the heavy chain and light chain vectors designed to express human IgG113 (link).
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6

Isolation of Plasmablasts from PBMCs

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Freshly separated peripheral blood mononuclear cells (PBMCs) or thawed PBMCs were stained with fluorescent-labelled antibodies to cell surface markers purchased from BD Biosciences, USA; Pacific blue anti-CD3 (clone UCHT1, Cat. No. 558117, BD), Fluorescein isothiocyanate anti-CD19 (clone HIB19, Cat. No. 555412, BD), Phycoerythrin-Cy7 anti-CD27 (clone M-T271, Cat. No. 560609, BD), Allophycocyanin-H7 anti-CD20 (clone L27, Cat. No. 641396, BD), Phycoerythrin-Cy5 anti-CD38 (clone HIT2, Cat. No. 555461, BD) and Phycoerythrin anti-human IgG (clone G18-145, Cat. No. 555787, BD). The CD3negCD19posCD20negCD27hiCD38hiIgGpos plasmablasts were gated and isolated in chamber as single cells as previously described [32 (link)].
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