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Crude collagenase

Manufactured by Merck Group
Sourced in United States

Crude collagenase is an enzyme mixture that is used to break down collagen, a structural protein found in various tissues. It is commonly used in research and laboratory settings to isolate and extract cells from tissues or to facilitate tissue dissociation. The core function of crude collagenase is to enzymatically digest and solubilize collagen, which is a key component of the extracellular matrix.

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6 protocols using crude collagenase

1

Extracting Skin Cells for Analysis

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A 2 × 2 cm2 piece of depilated back skin was minced and then digested in 6 ml of RPMI 1640 medium containing 10% FBS and 2 mg/ml crude collagenase (Sigma-Aldrich, St. Louis, MO, USA), 1.5 mg/ml hyaluronidase (Sigma-Aldrich, St. Louis, MO, USA), and 0.03 mg/ml DNase I (Roche Applied Science, Indianapolis, IN, USA) at 37 °C for 120 min [33 (link)]. Samples were passed through a 70-μm Falcon cell strainer (BD Biosciences, San Jose, CA, USA) to obtain single-cell suspensions. After centrifugation at 1200 rpm for 5 min, the cell pellet was resuspended in a RPMI 1640 medium. The cells were passed through a 40-μm Falcon cell strainer. The harvested cells were washed with ice-cold PBS and used for flow cytometric analysis and real-time PCR analysis.
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2

Cardiac fibroblast subsets isolation

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Single-cell suspensions were prepared following digestion of cardiac tissue with crude collagenase (C2139, Sigma-Aldrich). Cells were incubated with fluorescence-conjugated antibodies or with the respective isotype controls for 30 min on ice and protected from light. Nonviable cells were excluded by adding 0.5% propidium iodide (P4170, Sigma-Aldrich) to cell suspension prior to analysis in a FACSCanto II cytometer (BD Biosciences). Data analysis was performed in FlowJo VX software. The three most frequent fibroblast subsets were isolated by FACSAria (BD Biosciences), as described in Supplemental Experimental Procedures and in Figure S5. See also Figure S3 for detailed characterization of the inflammatory infiltrate.
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3

Collagenase-Induced Rat Tendinopathy

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This pilot study was conducted to evaluate the effectiveness of the pain pressure sensitivity test using the modified pliers. Rats (n = 5; BW 250–275 g) were anesthetized with an intraperitoneal injection of a ketamine and xylazine (75 mg/kg and 10 mg/kg, respectively). Right Achilles tendons were injected near the osteotendinous junction with 30 μL of crude collagenase (10 mg/mL saline; Sigma, St‐Louis, MO) using a 30G needle. Live animals were evaluated for tendon sensitivity (pressure pain sensitivity of both right and left legs) 24 and 72 h following the collagenase injection. As for the tendinopathy study, selected spinal cord peptides were analyzed after euthanasia.
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4

Isolation of Single-Cell Skin Suspension

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A 2×2.5-cm piece of depilated back skin was minced and digested in 7 ml of RPMI 1640 containing 10% FBS with 2 mg/ml crude collagenase (Sigma-Aldrich), 1.5 mg/ml hyaluronidase (Sigma-Aldrich), and 0.03 mg/ml DNase I (Roche Applied Science) at 37 oC for 90 min. The samples were passed through a 70-μm Falcon cell strainer (BD Biosciences) to obtain single-cell suspensions. After centrifugation at 1500 rpm for 5 min, the cell pellet was resuspended in a 70% Percoll solution (GE Healthcare) and then overlaid with a 37% Percoll solution, followed by centrifugation at 1800 rpm for 20 min. The cells were aspirated from the Percoll interface and passed through a 70-μm Falcon cell strainer. The harvested cells were washed with ice-cold PBS and were used for flow cytometric analysis.
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5

Isolation and Characterization of Calcifying VSMC-Derived Microvesicles

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MV were isolated from calcifying VSMC obtained from three CKD rats by collagenase digestion as previously described [4 (link)]. Calcifying VSMC were incubated with crude collagenase (500 U/ml, type IA, Sigma) in a solution of 0.25 M sucrose, 0.12 M NaCl, 0.01 M KCL and 0.02 M Tris buffer, pH 7.45, at 37°C for 3 hrs. The digests were centrifuged at 800 g and 30,000 g to remove cell debris and microsomes, respectively. The supernatant was centrifuged at 250,000 g to pellet the MV followed by resuspension in TBS (pH 7.6) with 0.25 M sucrose. The MV amount was determined by protein concentration (Bio-Rad). We used 3 different CKD rats to isolate 3 different VSMC cultures. Each of these three cultures was used to isolated MV. We then ran separate arrays on each of the VSMC-MV pairs.
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6

Isolation of Skin-Derived Cells

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A 2 × 2.5-cm piece of depilated back skin was minced and then digested in 7 ml of RPMI 1640 medium containing 10% FBS and 2 mg/ml crude collagenase (Sigma-Aldrich, St. Louis, MO, USA), 1.5 mg/ml hyaluronidase (Sigma-Aldrich), and 0.03 mg/ml DNase I (Roche Applied Science, Indianapolis, IN, USA) at 37 °C for 90 minutes [23 (link)]. Samples were passed through a 70-μm Falcon cell strainer (Fisher Scientific/BD Biosciences, Pittsburgh, PA, USA) to obtain single-cell suspensions. After centrifugation at 1500 rpm for 5 minutes, the cell pellet was resuspended in a 70% Percoll solution (GE Healthcare Life Sciences) and then overlaid with a 37% Percoll solution, followed by centrifugation at 1800 rpm for 20 minutes. The cells were aspirated from the Percoll interface and passed through a 70-μm Falcon cell strainer. The harvested cells were washed with ice-cold PBS and used for flow cytometric analysis.
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