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4 protocols using anti cd38 hit2

1

Immune Cell Phenotyping under BSL 2+

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Immune cell phenotyping was performed under BSL 2+ conditions by incubating 200 μL of fresh whole blood in polystyrene tubes with two different fluorochrome-labeled antibody panels for 20 min in the dark [Panel 1: anti-CD3 (SP34-2, #562877), anti-CD4 (L200, #560836), anti-CD8 (SK1, #341051); anti-CD19 (HIB19, #555415), anti-CD38 (HIT2, #555460), and anti-HLA-DR (G46-6, #555811) from BD, anti-CD20 (2H7, #47-0209-42) from eBioscience, and anti-CD27 (O323, #302838) from BioLegend. Panel 2: anti-CD3 (UCHT1, #557943), anti-CD11c (O33-782, 561355), anti-CD14 (M5E2, #565283), anti-CD19 (HIB19, #557921), anti-CD123 (7G3, #554529), and anti-HLA-DR (G46-6, #560651) from BD; anti-CD16 (CB16, #47-1068) and anti-CD56 (MEM188, #17-0569) from eBioscience, and anti-CD20 (2H7, #302332) from BioLegend]. Flow cytometry was performed on an LSRII (BD) and data was analyzed using FlowJo software version 9 (Tree Star). T cells expressing both HLA-DR and CD38 were considered activated.
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2

Assessing TRAIL Receptor Expression

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CD138+ plasma cells or CD138- bone marrow mononuclear cells (BM-MNC) were cultured in RPMI 1640 medium supplemented with 10% FBS in the presence or absence of 10 nM bortezomib for 24 hours in U-bottom 96-well plates. Cells were washed with PBS and stained with fluorescently labeled anti-TRAIL receptor antibodies, TRAIL-R1 (DR-4-02), TRAIL-R2 (DR5-01-1), TRAIL-R3 (TRAIL-R2-02) and TRAIL-R4 (TRAIL-R4-01) (Thermo Scientific); anti-CD38 (HIT2, BD Biosciences, San Jose, CA) and anti-CD138 (MI15, BD Biosciences), additionally CD138- BM-MNC were stained with anti-CD45 (HI30, BD Biosciences) antibody 30 minutes on ice. The cells were then washed and resuspended in PBS at 4°C. Relative expression of each TRAIL receptor was normalized by MFI of corresponding isotype control.
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Multiparametric Flow Cytometry Immune Profiling

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PBMCs were isolated using Ficoll-Paque density gradient centrifugation, frozen in freezing medium [10% DMSO, 90% fetal bovine serum (FBS)] and stored at -80°C until use. For staining, PBMCs were thawed using complete RPMI (RPMI+10%FBS) and washed with PBS. The cells were first stained using Fixable Aqua Dead Cell Kit (Thermofisher), followed by staining with anti-CD3 (UCHT1) (Biolegend), anti-CD4 (RPA-T4) (BD Biosciences), anti-CD8 (SK1) (Biolegend), anti-CD19 (HIB19) (BD Biosciences), anti-CD27 (O323) (Biolegend), anti-CD56 (B159) (BD Biosciences), anti-CD45RA (2H4) (Beckman Coulter), anti-CD38 (HIT2) (BD Biosciences) and anti-CD38 (JK36) (Beckman Coulter). The cells were washed and analyzed using BD LSRFortessa™ cell analyzer. Data analyses were performed using Flowjo V10.5.3 (BD)
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4

Isolation and Activation of B and T Cells

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Peripheral blood mononuclear cells (PBMCs) were isolated by standard density-gradient centrifugation (Lymphoprep Fresenus Kabi, Norway). B cells (CD19 + ) and T cells (CD3 + ) were positively selected using magnetic beads (Miltenyi Biotec, Germany) according to the manufacturer's instructions. For isolation of marginal zone-like B cells, B cells (CD19 + ) were stained with anti-CD27 brilliant Violet 605 (O323) (Biolegend, USA) and anti-IgD VioBlue (REA740, Miltenyi Biotec) mAb. CD19 + CD27 + IgD + B cells were sorted with a BD Influx cell sorter (BD Bioscience, USA). FACS sorted naïve and memory B cells (as above) were activated with CpG (2.5 µg/ml) for 24 hours and then stained with anti-CD86-PE (IT2.2, Biolegend), anti-CD69-FITC (FN50, Immunotools), anti-HLADR-APC (G46-6, BD Biosciences), and anti-CD71-PE (CY1G4, Biolegend). For carboxyfluorescein succinimidyl ester (CFSE) dilution assays, PBMCs were stained with CFSE and then activated with anti-CD3 and anti-CD28 mAb (for T cells), or with CpG or IL-21/CD40L (for B cells). Cells were stimulated for 5 days and then assessed by flow cytometry. For CMV ELISPOT assays patient and HC PBMCs were stimulated CMV antigens using the T-track CMV kit (Lophius). For detailed B cell phenotyping the following additional antibodies were used: anti-CD24 (IML5, Biolegend), anti-CD38 (HIT2, BD Biosciences), anti-TACI (1A1, Biolegend).
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