The largest database of trusted experimental protocols

3 protocols using prpa2 s33

1

DNA Damage Response Protein Profiling

Check if the same lab product or an alternative is used in the 5 most similar protocols
The antibodies used in this study are as following: γH2A.x (Millipore, Cat. 05-636); CHK1 (Cell Signaling, Cat. 2360); pCHK1(s345) (Cell Signaling, Cat. 2348); CHK2 (Cell Signaling, Cat. 6334); pCHK2(T68) (Cell Signaling, Cat. 2197); pRPA2(s33) (Bethyl, Cat. A300-246A); RPA2 (Cell Signaling, Cat. 2208); 53BP1 (Santa Cruz Biotechnology, Cat#sc-515841); BRCA1 (Santa Cruz Biotechnology, Cat#sc-6954); pDNA PKcs (S2056) (Abcam, Cat#ab18192); beta-tubulin (Sigma-Aldrich, Cat#T5168); CtIP (Cell Signaling, Cat.9201).
+ Open protocol
+ Expand
2

Antibody Panel for DNA Damage Response

Check if the same lab product or an alternative is used in the 5 most similar protocols
Primary antibodies used in this study were Flag M2 (Sigma, F1804), Myc (Santa Cruz Biotechnology, SC-40), H2AX (Millipore, 07-627), γH2AX (Millipore, 05-636), H2AZ (Cell Signaling, 2718S), macroH2A (Abcam, AB37264), H2A.Bbd (Millipore, 06-1319), ZMYM3 (Abcam, AB106626), ATM (Santa Cruz Biotechnology, SC-135663), pATM S1981 (Abcam, AB81292), β-tubulin (Abcam, AB6046), RAD51 (Abcam, AB88572), RAP80 (Bethyl Laboratories, A300-763A), ABRA1 (Abcam, AB139191), BRCA1 (Santa Cruz Biotechnology, SC-6954), HRP-linked anti-GST (Sigma, A7340), MBP (Abcam, AB9084), phospho-H3 S10 (Cell Signaling, 3377), 53BP1 (Novus Biologicals, NB100-304), RAD18 (Cell Signaling, 9040), RPA2 (Abcam, AB2175), pRPA2 S33 (Bethyl Laboratories, A300-246), pRPA2 S4/S8 (Bethyl Laboratories, A300-245), Chk1 (Santa Cruz Biotechnology, SC-8408), and pChk1 (Cell Signaling, 2348). For Western blotting analysis, secondary antibodies HRP-linked anti-rabbit IgG and HRP-linked anti-mouse IgG were purchased from Cell Signaling. For immunofluorescence, Alexa fluor 488 goat anti-rabbit and Alexa fluor 594 goat anti-mouse were used (Invitrogen).
+ Open protocol
+ Expand
3

Western Blot Analysis of DNA Damage Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were collected in 100 to 200 μl of lysis buffer. Relative protein concentration was determined with NanoDrop and samples adjusted to the same concentration with the lysis buffer. Between 20 to 40 μl of cell lysate supplemented with 5 to 10 μl of 5x concentrated reducing loading buffer were loaded on 8 to 12 % gels (SDS page). Proteins were transferred to nitrocellulose membrane using semi-dry apparatus. Membranes were blotted with 5 % milk in PBS buffer. Primer antibodies were diluted 500 to 2000 times in PBS buffer plus 0.1 % Tween. Fluorescent secondary antibodies were applied for detection. The following antibodies were used for immunoblots: Caspase-3 (Cell Signaling, #9665), cleaved Caspase-3 (Cell Signaling, #9661), p-Chk2 T68 (Cell Signaling, #2661), p-Chk2 S33/35 (Cell Signaling, #2665), Chk2 (Cell Signaling, #2662), p-Chk1 S345 (Cell Signaling, #2341), p-Chk1 S317 (Bethyl, #A300-163A), Chk1 (Cell Signaling, #2345), p-RPA2 S33 (Bethyl, #A300-246A), RPA2 (Cell Signaling, #2208), p-H2AX (Cell Signaling, #9718), H2AX (Cell Signaling, #2595), alpha-tubulin (Sigma, #T6074-200UL).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!