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8 protocols using beyoclick edu 555 cell proliferation assay kit

1

Quantifying Sertoli Cell Proliferation with EdU Assay

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For the EdU assay, Sertoli cells were cultured in 24-well plates, transfected with miR-34c mimics, inhibitor, or NC when the cell density reached approximately 70%. Fluorescence was observed after 24 h, and EdU was detected at 48 h. According to the manufacturer’s instructions of BeyoClick EdU-555 Cell Proliferation Assay Kit (Beyotime Biotechnology, Shanghai, China), a 20 μM EdU working solution was prepared. An equal volume was added to a 24-well plate, whereby the concentration of EdU in the 24-well plate was 10 μM incubation was continued for 2.5 h. The culture solution was removed, and the cells were fixed with 0.5 mL of 4% paraformaldehyde and then permeabilized with a permeabilizing solution. After using the Click reaction solution, the cells were incubated in the dark for 30 min. Nuclear staining was performed using Hoechst 33342 to facilitate observation of the proportion of cell proliferation detected. Observed under a microscope (Olympus, Tokyo, Japan) with a magnification of 100 times, it can be found that the cell nucleus is stained blue, while the proliferating cells are red.
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2

Evaluating S100A9 Impact on IPEC-J2 Cell Proliferation

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The number of EdU-positive cells was measured to assess the effect of the S100A9 gene on CPB2 toxin-induced IPEC-J2 cell proliferation. The collected IPEC-J2 cell suspension was seeded into a 24-well plate and cultured for 24 h. Next, si-NC, si-S100A9, pcDNA3.1, and pc-S100A9 were transfected into IPEC-J2 cells for 24 h using Lipofectamine® 2000. After treatment with 20 μg/mL CPB2 toxin for 24 h, IPEC-J2 cells were incubated with EdU (10 μM) working solution for 2 h (BeyoClick™ EdU-555 Cell Proliferation Assay Kit; Beyotime, Shanghai, China). The nuclei were stained with Hoechst 33342. Qualitative detection was performed using an inverted fluorescent microscope (Olympus, Japan).
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3

Exploring Autophagy and Apoptosis Mechanisms

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CPT was purchased from Sigma-Aldrich (≥98% purity; St. Louis, MO, USA) and dissolved in dimethyl sulfoxide (DMSO) as a stock solution at 0.1 M. Chloroquine (CQ) and 3-Methyladenine (3-MA) were purchased from Sigma-Aldrich. Insulin-like growth factor-I (IGF-I) was obtained from R&D Systems, Inc. (Minneapolis, MN, USA). Annexin V-FITC/PI Apoptosis Detection Kit was purchased from Vazyme (Nanjing, China). BeyoClick™ EdU-555 Cell Proliferation Assay Kit was purchased from Beyotime (Shanghai, China). Antibodies, including PI3-kinase p-p85-α (ab182651), Bcl-2 (ab59348), HRP-conjugated goat anti-rabbit (ab6721), and anti-mouse IgG (ab6789) were purchased from Abcam Co. (Cambridge, MA, USA). Antibodies, including AKT (#9272), p-AKT (#4058), Bax (#2772), PARP (#9532), Caspase-3 (#9662), Cleaved Caspase-3(#9664), LC3B (#3868), Beclin-1 (#3495), SQSTM1/p62 (#8025), and β-actin (ab8227) were obtained from Cell Signaling Technology Inc. Antibodies, including anti-PI3-kinase p85-α (SAB4502195), were purchased from Sigma-Aldrich.
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4

Cell Assay Reagents and Compounds

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RC48 was purchased from RemeGen Co. Ltd. (Shandong, China). Dabrafenib was purchased from Selleck (Houston, USA). Annexin V-FITC/PI cell apoptosis assay kit, Cell Cycle Assay Kit, BeyoClick™ EdU-555 cell proliferation assay kit, TUNEL assay kit, and crystal violet staining solution were purchased from Beyotime Biotechnology Inc (Shanghai, China).
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5

EdU-based Proliferation Assay and CFSE-labeled T Cell Co-culture

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Cell proliferation was detected with the BeyoClick™ EdU-555 Cell Proliferation Assay Kit (C0075S, Beyotime). The cells were incubated in 6-well plates, and EdU working solution (20 μM) pre-warmed at 37 °C was added to the 6-well plates for a 1-h incubation. After the EdU labeling of cells was completed, the culture medium was removed. The cells were fixed by adding 1 mL of 4% paraformaldehyde for 15 min, incubated with phosphate-buffered saline (PBS) permeabilization solution for 10–15 min, and with 0.5 mL of Click reaction solution for 30 min in the dark (all at room temperature). Cell nuclei were stained with Hoechst 33,342 staining solution (C1025, Beyotime), and then cell proliferation was observed under a fluorescence microscope.
CD8+ T cell proliferation in the co-culture system was assayed with the CellTrace™ CFSE Cell Proliferation Kit (C34554, Thermo Fisher), and CFSE density was measured by flow cytometry.
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6

Proliferation Assay for Porcine Stem Cells

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The proliferation of porcine SCs was assayed by a BeyoClick™ EdU-555 cell proliferation assay kit (C0075S, Beyotime). Briefly, the original cell medium was used to dilute 1 μl EDU to prepare EDU working fluid, the remaining cell medium was discarded, and 1 ml of fresh medium was added again. Then, the newly prepared EDU working solution was added, and the cells were incubated for 2 h at 37°C in the dark. After that, the SCs were fixed with 4% paraformaldehyde for 15 min, and after washing three times, the SCs were permeabilized with 0.3% Triton X-100 for 15 min. Then, the SCs were washed twice and incubated with 0.5 ml click additive solution in the dark for 30 min. Finally, the SCs were counterstained with 1 × Hoechst 33342 (10 μM) in the dark for 10 min, washed three times and imaged by fluorescence microscopy (TS2-S-SM, Nikon). The images were analyzed by NIH ImageJ software (National Institutes of Health, Bethesda, MD, Unites States).
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7

Evaluating Cell Proliferation in Embryos

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Cell proliferation was measured using the BeyoClick EdU-555 Cell Proliferation Assay Kit (Beyotime, Shanghai, China) according to the manufacturer’s instructions. In short, on day 6, the embryos were transferred to fresh IVC medium containing 10% EdU with or without WDL and then incubated at 38.5 °C in an atmosphere of 5% CO2 and 100% RH for 8 h. Next, the blastocysts were fixed with 3.7% paraformaldehyde in PBS-PVA for 30 min, and then permeabilized in 0.1% Triton X-100 at RT for 30 min. After washing four times with PBS-PVA, the embryos were incubated with 5% BeyoClick Additive Solution at 38.5 °C in an atmosphere of 5% CO2 and 100% RH for 14 h. Then, the embryos were incubated with 10 mg/mL of Hoechst 33342 at RT for 10 min to label the nuclei. Finally, the embryos were washed four times with PBS-PVA and mounted on glass slides. An inverted fluorescence microscope (Ti2eU; Nikon, Tokyo, Japan) and ImageJ software (NIH) were used to count the number of EdU-positive cells and the total cells. The proliferation rate was calculated as the ratio of EdU-positive cells to the total number of cells.
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8

Cell Proliferation Quantification in Blastocysts

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The manufacturer’s instructions were followed to analyze cell proliferation using the BeyoClick EdU-555 Cell Proliferation Assay Kit (Beyotime, Shanghai, China). In short, on day 6 of the oocyte culture, 10% EdU was added to the IVC culture medium with or without CHE and then incubated in the dark at 38.5 °C in an atmosphere of 5% CO2 for 10 h. After incubation, the blastocysts developed to day 7 were washed four times with PBS-PVA, fixed in PBS-PVA containing 3.7% paraformaldehyde for 30 min, and then containing 0.1% Triton X-100 permeabilized for 30 min, all at room temperature. After permeabilization, the blastocysts were washed four times, mixed with 5% BeyoClick Additive Solution, and incubated in the dark at 38.5 °C in an atmosphere of 5% CO2 for 15 h. Finally, the blastocysts were incubated with 10 µg/mL Hoechst 33,342 in the dark at 37.5 °C for seven minutes to mark the nuclei. An inverted fluorescence microscope (Ti2eU; Nikon, Tokyo, Japan) and ImageJ version 8.0.2 software (NIH, Bethesda, MD, USA) were used to count the number of EdU-positive cells and total cells. We compared the level of cell proliferation by calculating the percentage of EdU-positive cells in the total number of blastocysts. The number of blastocysts on day 7 for the EDU staining assay was 15 to 20, and the assay was repeated more than three times.
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