The largest database of trusted experimental protocols

11 protocols using gsk2656157

1

ER Stress Pathway Molecular Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
The primary antibodies used are listed as follows: anti-cytochrome c (1:1,000, 10993-1-AP, Proteintech, rosemont, IL, USA), anti-caspase-9 (1:1,000, #9508, Cell Signaling, Danvers, MA, USA), anti-PERK (1:1,000, #3192, Cell Signaling, Danvers, MA, USA), anti-phosphorylated-PERK (anti-p-PERK; Thr982;1:800, DF7576, Affinity Biosciences, Cincinnati, OH, USA), anti-IRE1 (1:500, ab37073, Abcam, Cambridge, MA, USA), anti-p-IRE1 (phosphor S724; 1:1,000, ab48187, Abcam, Cambridge, MA, USA), anti-activating transcription factor 6 (anti-ATF6; 1:1,000, ab203119, Abcam, Cambridge, MA, USA), anti-N’ATF6 (1:800, ab37149, Abcam, Cambridge, MA, USA) and anti-β-actin (1:3,000, GTX109639, GeneTex, Irvine, CA, USA). The ER stress activator Tunicamycin (TM) and the p-PERK inhibitor GSK2656157 were obtained from MedChem Express (Monmouth Junction, NJ, USA). The p-IRE1 inhibitor 3,5-dibromosalicylaldehyde (DBSA) was obtained from Tokyo Chemical Industry (TCI, Tokyo, Japan).
+ Open protocol
+ Expand
2

Oligodendrocyte Protection in Hypoxia-Ischemia

Check if the same lab product or an alternative is used in the 5 most similar protocols
To mimic hypoxic-ischaemic injury, an oxygen-glucose deprivation (OGD) model (O2 < 0.1%) was constructed by AnaeroPack (Cat# D07, Mitsubishi Gas Chemical Company, Japan) in a 2.5 L closed plastic box. After reaching 70–80% confluency at 3 days, OPCs were incubated in hypoxic conditions with glucose-free DMEM (Cat# 11966025, Gibco) for 3 h and then switched to DMEM-F12 containing 10% FBS and 1% penicillin/streptomycin. The inositol-requiring protein 1α (IRE1α) inhibitor STF083010 (Cat# 307543-71-1, MedChemExpress) (Papandreou et al., 2011 (link); Zhao et al., 2017a (link)) and protein kinase RNA-like ER kinase (PERK) inhibitor GSK2656157 (Cat# 1337532-29-2, MedChemExpress) (Atkins et al., 2013 (link)) with different concentrations were used to treat primary oligodendrocytes at 1 h before and after OGD stimulation, respectively. Then, OPCs were collected for quantitative real-time PCR (RT–PCR), and live/dead cells by Calcein AM/PI double staining and flow cytometry of apoptosis by Annexin V-EGFP/PI double staining (Cat# KGA103, Jiangsu KeyGen BioTech Corp., Ltd. China). Staining methods followed the reference specification. Three independent experiments were performed.
+ Open protocol
+ Expand
3

Pharmacological Inhibition of PERK and Caspase-12 in N2a Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
After seeding N2a cells for 24 h, cells were pretreated with 4 µM GSK2656157 (MedChemExpress LLC, Shanghai, China) (a PERK inhibitor) and 5 µM Z-ATAD-FMK (BioVision Inc., Milpitas, CA, USA) (a caspase-12 inhibitor) for 1.5 h and 6 h, respectively. Following pretreatment with inhibitors, Lipofectamine 3000 reagent was used to transfect cells with plasmids as described previously.
+ Open protocol
+ Expand
4

Pharmacological Inhibitors of UPR Pathways

Check if the same lab product or an alternative is used in the 5 most similar protocols
Selective PERK inhibitors GSK2656157 and GSK2606414 were obtained from MedChemExpress, and AMG PERK 44 was obtained from Tocris Bioscience. The IRE1α inhibitor 4μ8c was obtained from Sigma-Aldrich. The pan-caspase inhibitor z-VAD-fmk was obtained from Invivogen. The caspase-8 inhibitor z-IETD-fmk and the caspase-9 inhibitor z-LEHD-fmk were purchased from R&D Systems. The apoptosis enhancer etoposide was obtained from Sigma-Aldrich. The UPR inducer tunicamycin was obtained from Tocris Bioscience.
+ Open protocol
+ Expand
5

Cellular Stress Response Pathway Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
DMSO, phorbol 12-myristate 13-acetate (PMA), N-acetyl-l-cysteine (NAC), and 4-phenylbutric acid (4-PBA) were purchased from Sigma-Aldrich. STF-083010, GSK2656157, and SP600125 were purchased from MedChemExpress. Pyrrolidine dithiocarbamate (PDTC) was purchased from Beyotime. Antibodies against Bip, PERK, IRE1α, NF-κB p65, JNK, P-JNK, and GAPDH and secondary antibodies were purchased from Cell Signaling Technology.
+ Open protocol
+ Expand
6

Cytoprotective Compounds Procurement

Check if the same lab product or an alternative is used in the 5 most similar protocols
DMSO was purchased from Solarbio (D8371, China). TM was purchased from Abcam (ab120296, UK). 4-PBA was purchased from Sigma-Aldrich (P21005-25G, China). PERK selective inhibitor GSK2656157 was purchased from MedChemExpress (HY-13820, China), and tea polyphenols were obtained from Meilunbio (MB5041-1, China).
+ Open protocol
+ Expand
7

Arnicolide D Cytotoxicity Evaluation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Arnicolide D (C19H24O5, CAS34532-68-8) was purchased from Jiangsu Yongjian Pharmaceutical Co., Ltd (Jiangsu, China). Chemical reagents, including N-AcetylL-cysteine (NAC), propidium iodide (PI), z-VAD-fmk, ferrostatin-1, necrostatin-1, cycloheximide (CHX), and GSK2656157, were obtained from MedChemExpress (Shanghai, China). Dulbecco’s Modified Eagle’s Medium, fetal bovine serum, and Lipofectamine™ 3000 were sourced from Thermo Fisher (MA, USA).
+ Open protocol
+ Expand
8

Modulating Embryonic Protein Translation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Dechorionated embryos were treated with 1 μM SU5416 (Merck KGaA; 676487), 20 μM GSK2656157 (MedChemExpress; HY-13820), 10 μM GCN2-IN-1 (MedChemExpress; HY-100877), 10 μM GCN2iB (MedChemExpress; HY-112654), or 50 μM 4-Phenylbutyric acid (4-PBA) (Sigma Aldrich; P21005) from 24 to 54 hpf. To inhibit global protein translation, the embryos were treated with 360 μM CHX (Sigma-Aldrich; C7698). While 4-PBA was dissolved in water, the other chemicals were dissolved in Dimethyl sulfoxide (DMSO) (Sigma-Aldrich; D8418). The solvents, water or DMSO, were used as controls, respectively, and the final concentration of DMSO is 0.1%.
+ Open protocol
+ Expand
9

Phosphorylation Inhibitor Assay in Human Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
6-Methoxyflavone (purity ! 98%) was purchased from Weikeqi Biological Technology Co., Ltd. (Chengdu, China). Selective PERK phosphorylation inhibitor GSK2656157 was obtained from MedChem Express (New Jersey, USA) and dissolved in dimethyl sulfoxide (DMSO). HeLa, C33A, SiHa, and HaCaT human cell lines were purchased from the Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences (Beijing, China). Details of each cell line were presented in Table 1. There were no ethical issues involved in this study. C33A, SiHa, and HaCaT cells were cultured in modified Eagle's medium (HyClone, Logan, UT, USA) with 10% foetal bovine serum (FBS). HeLa cells were cultured in Dulbecco's modified Eagle's medium (HyClone, Logan, UT, USA) supplemented with 10% FBS. The cells were cultured at 37 C in a 5% CO 2 atmosphere.
+ Open protocol
+ Expand
10

Modulation of ER Stress Pathways

Check if the same lab product or an alternative is used in the 5 most similar protocols
Escherichia coli O111:B4 lyophilized powder was used as a source of LPS herein (L2630 from Sigma). The ER stress inhibitor 4-phenylbutyric acid (4-PBA), the AMPK inhibitor (compound C; CC), the PERK inhibitor (GSK2656157), the IRE1 inhibitor (4μ8C), the JNK inhibitor (SP600125), and the autophagy inhibitor (chloroquine, CQ) were all purchased from MedChemExpress.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!