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48 well culture plate

Manufactured by Corning
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The 48-well culture plates are a versatile tool for in vitro cell culture experiments. These plates provide a standardized and consistent platform for growing and maintaining cells in a laboratory setting. Each plate contains 48 individual wells, allowing for multiple experimental conditions or replicates to be tested simultaneously. The plates are designed to be compatible with various cell types and culture media, facilitating efficient cell growth and analysis.

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32 protocols using 48 well culture plate

1

Evaluating Cell Viability on Biomaterial Surfaces

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Six groups were analyzed: Ti6Al4V, Ti6Al4V-HA, Ti6Al4V-ßTCP, YTZP, YTZP-HA and YTZP-βTCP. Sample discs (N=8) were placed in 48-well culture plates (Corning, Corning NY, USA) under sterile conditions and cell viability and proliferation were measured after 1, 3, 7 and 14 days using a resazurin-based viability assay - Cell-Titer Blue®, (Promega, Madison, WI, USA) according to the manufacturer’s protocol. Fluorescence spectroscopy (PerkinElmer LS 50B, Waltham MA, USA) at excitation/emission wavelengths of 560/590 nm was performed and results were presented in fluorescence arbitrary units (AU).22 (link),24 (link)
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2

Organoid Culture and Classification

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Isolated crypts were resuspended in Matrigel (Corning) and plated in 48-well culture plates (Corning). After incubation at 37 °C for 15 min, 250 μL of maintenance medium (50% Wnt3a-conditioned medium (ATCC#CRL-2647, Manassas, VA, USA) and 50% of 2× basal medium, supplemented with recombinant human EGF (Sigma-Aldrich), recombinant human noggin (R&D Systems, Minneapolis, MN, USA), recombinant human R-spondin1 (PeproTech, Cranbury, NJ, USA), nicotinamide (Sigma-Aldrich), p160ROCK inhibitor (Selleck Chemicals, Houston, TX, USA), p38 MAP kinase inhibitor (SB202190, Sigma-Aldrich), and Prostaglandin E2 (PGE2, Cayman Chemical, Ann Arbor, MI, USA), were added to the wells. A GSK3 inhibitor (Stemgent, Cambridge, MA, USA) was added to the medium during the first 2 days.
Depending on their shape, organoids can be classified into spheroids and enteroids. Spheroids are defined as round- or oval-shaped organoids with a thin wall composed of a single layer of undifferentiated cells. Enteroids are defined by the presence of visually sharp borders (buddings) along their basolateral (anti-luminal) side or irregularly thickened walls, which consist of all components of epithelial cells [28 (link)] (Figure 10).
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3

Intestinal Organoid Differentiation Protocol

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After 7 days of the culture process, the organoids were mechanically disrupted and suspended in cell dissociation buffer (Thermo Fischer Scientific). Single cells and small cell clusters were resuspended in Matrigel and plated in 48-well culture plates (Corning). The medium was changed every 2 days, and the organoids were passaged at a ratio of 1:2–1:4 on day 7. After 6 passages, most organoids in the maintenance medium formed uniform spheroids and could be subcultured stably for a long time in vitro.
To recreate the physiological parameters of the intestinal epithelium, the spheroids were cultured in a differentiation medium (maintenance medium without Wnt3A conditional medium, SB202190, nicotinamide, and PGE2). The differentiation medium was changed every 2 days and enteroids were grown for 7–12 days.
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4

Granulosa Cell Culture and Treatments

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The SWFs from D580 hens were transferred to the DMEM high glucose (Hyclone, Tauranga, New Zealand) supplemented with 5% fetal calf serum (FCS; Hyclone, Utah), 100 IU/ml penicillin (Beyotime Biotechnology, Shanghai, China), 100 mg/ml streptomycin (Hyclone, Fremont, CA, United States), 2 mM glutamine and insulin-transferrin-selenium mixture (ITS: 10 mg/ml insulin, 5 mg/ml transferrin and 30 nM selenite). The follicles were cultured in 48-well culture plates (Corning Inc., Corning) with the medium at 38.5°C with 5% CO2 for 72 h (Zhou et al., 2021 (link)). The medium was renewed every 24 h. The cultured SWFs from D580 hens were treated with 5 μg/ml (8.5 μM) GSPs (Liu X. T. et al., 2018 (link)) or/and 10 mM 3-methyladenine (3-MA).
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5

T Cell Proliferation Assay with PGRN

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hPBMCs, CD4+, or CD3+ T lymphocytes (5 × 105 cells/well) were treated with phytohemagglutinin (PHA, 12.5 ug/ml, Sigma Aldrich, St. Louis, MO, USA) to stimulate T lymphocyte proliferation in the absence or presence of PGRN and incubated in 48-well culture plates (Corning, NY, USA) for 5 days. EdU (5-ethynyl-2-deoxyuridine, 10 μM, Invitrogen, Carlsbad, CA, USA) was added to the culture plates 18 hr before harvest. Based on a click reaction, EdU were reacted with azide, which is coupled to Alexa Flour 488 (Invitrogen, Carlsbad, CA, USA) dye. After harvesting the cells, the extent of cell proliferation was measured by flow cytometry (Beckman Coulter, Miami, FL, USA). Data were analyzed with FlowJo software (FlowJo, Ashland, OR, USA). Human TGF-β RI Kinase Inhibitor VI (SB431542, Selleckchem, Houston, TX, USA) or Treg inhibitor (Peptide P60, Abbiotec, San Diego, CA, USA) was used to block the formation of iTregs, and recombinant human TGF-β 1 protein (R&D System, Minneapolis, MN, USA) was used to induce the formation of iTregs.
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6

In vitro Avian Follicle Culture

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The SWFs and ASWFs from high-laying (aged 280 ± 20 days) hens were transferred to the complete medium of DMEM high glucose (Hyclone, Tauranga, New Zealand) supplemented with 5% fetal calf serum (FCS; Hyclone, UT, USA). The follicles were cultured in 48-well culture plates (Corning Inc., Corning, NY, USA) at 38.5 °C and 5% CO2 atmosphere for 72 h. ASWFs were treated with FSH (0.1 IU/mL) for 72 h [9 (link)].
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7

Evaluating Cell Proliferation on Nanofibrous Scaffolds

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The human keratinocytes (HaCaTs), human umbilical vein ECs (HUVECs), and human dermal fibroblasts (HDFs) were purchased from the cell bank, Chinese Academy of Sciences. To evaluate the cell proliferation on the PT-P, PT-P/GM, and 3D-PT-P/GM scaffolds, the nanofibrous scaffolds were sheared into round pieces with a diameter of 10 mm and sterilized with 75% ethanol for 15 min for twice, then washed with sterilized PBS thrice. The HUVECs, HDFs, and HaCaTs were seeded on the surfaces of scaffolds (PT-P, PT-P/GM, and 3D-PT-P/GM) with a density of 6 × 103 cells per well in 48-well culture plates (Corning, USA) respectively and maintained at 37 °C under a humidified atmosphere with 5% CO2. The viability of cells was measured by cell counting kit-8 (Kumamoto, Japan). The absorbance value of samples was measured at 450 nm using an enzyme-linked immunosorbent assay plate reader (Molecullar Devices).
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8

Primary Monocyte Isolation and Macrophage Differentiation

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Purified primary human monocytes from peripheral blood were obtained from the Human Immunology Core at the University of Pennsylvania (Philadelphia, PA, USA). The Human Immunology Core has the Institutional Review Board approval for blood collection from healthy donors. Freshly isolated monocytes were plated in 48-well culture plates (Corning CELLBIND Surface) at a density of 2.5 × 105 cells/well in DMEM containing 10% fetal calf serum (FCS), 1% non-essential amino acid, 1% L-glutamine, and 1% penicillin–streptomycin solution at 37°C with 5% CO2. Monocyte-derived macrophages refer to 7-day-cultured monocytes in vitro. HIV-infected U1 and OM10.1 cell lines were provided by the AIDS Reagent Program, National Institutes of Health. U1 is a cloned cell line derived by limiting dilution cloning of U937 cells surviving an acute infection with HIV (LAV-1 strain); each cell has two copies of integrated HIV proviral DNA (17 (link), 18 (link)). OM10.1 cells were cloned from HL-60 promyelocyte cells that endured an acute HIV infection. Each cell contains a single integrated provirus (19 (link), 20 (link)). U1 and OM10.1 cells were cultured in RPMI1640 supplemented with 10% FCS, 1% L-glutamine, and 1% penicillin–streptomycin.
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9

Cell Attachment and Infiltration on Scaffolds

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To evaluate the cell attachment and infiltration on those scaffolds, the nanofibrous scaffolds were sterilized similarly to cell proliferation assay. HUVECs were seeded on the surfaces of PT-P, PT-P/GM, and 3D-PT-P/GM with a density of 2 × 104 cells per well in 48-well culture plates (Corning, USA) and maintained at 37 °C under a humidified atmosphere with 5% CO2 for 24 h. Then, the cells were fixed with 4% (w/v) paraformaldehyde for 15 min. Finally, Cells were then permeabilized with 0.1% Triton-X100 for 10 min and incubated with FITC-phalloidin at 37 °C for 1 h. Cell attachment and infiltration could be observed by laser scanning confocal microscope.
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10

Virus Transduction Optimization for Cell Lines

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Virus transduction was done as per an in-house protocol. Briefly, adherent cells were seeded (2 × 105/well) in 24-well tissue culture plates (Corning Inc. NY) containing cell culture medium and 8ng/mL polybrene (Hexadimethrine bromide, Sigma, MO). Cells were transduced at different multiplexity of infection (MOI) so to generate transduced population with <25% transduction efficiencies. After 12–18hrs exposure to the virus (in 5% CO2; 37C incubator) the (transduction) vector-containing medium was carefully replaced with fresh culture medium and maintained for 14 days. Cells were then digested with Gibco 0.05% trypsin-EDTA and reconstituted in medium for flow cytometry. Suspension cells were seeded (5 ×104/well) in 48-well culture plates (Corning Inc. NY) in transduction medium with various MOI. They were then incubated for 12–18hrs after which they were centrifuged at 1200rpm for 1hr at room temperature. Cell pellets were reconstituted in fresh medium and maintained in culture for 14 days after which aliquots were assayed for expression determination by flow cytometry.
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