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10 protocols using labview 2016

1

Multimodal Neurophysiology in Head-Fixed Mice

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During each recording session, EEG, EMG, and left eye pupillometry were performed on head-fixed mice: sessions lasted 3-6 h/day in the light phase within Zeitgeber time 2-9 (10 AM to 6 PM). Specifically, EEG and EMG were amplified 1000 times with filter configurations of 1-300 Hz and 10-300 Hz, respectively, (Model 3000; A-M Systems), analog-to-digital converted (16-bit depth; NI-9215; National Instruments, Austin, TX, USA), and recorded at a sampling rate of 1000 Hz using a custom written program (LabVIEW 2016; National Instruments) on a personal computer (Windows 10 Pro; Microsoft, Redmond, WA, USA). Images of the mouse left eye were captured using a custom-written program (LabVIEW 2016; National Instruments, Austin, TX, USA) on the PC at 30.3 ± 16.5 Hz (mean ±SD) with an infrared (IR) LED ring light (940 nm, FRS5 JS; OptoSupply, Hong Kong) and a USB camera for which the IR cut-off filter was removed beforehand (BSW200MBK; Buffalo, Aichi, Japan). A single recording session was performed once a day for 3-6 h.
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2

Mental Arithmetic Protocol for Cognitive Load Measurement

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The mental arithmetic task was designed to cause mental workload (MWL) based on previous studies (So et al., 2017 (link); Jost et al., 2019 (link)) and was divided into two task levels: low- and high-MWL. The low-MWL task consisted of easy questions involving single-digit addition and subtraction (i.e., 3+2, 4–1, with numbers ranging from 1 to 9). The high-MWL task consisted of difficult questions involving mixed arithmetic operations (i.e., 36×7–24, 43+72/9, number range 1–99). The mental arithmetic task questions were randomly presented within a defined range, and included a true answer result and two false confusion results. The two false results were automatically calculated by randomly adding or subtracting a number in the range of 1–5 from the correct answer. Participants were required to select the correct answer using the arrow and spacebar keys of the keyboard, as shown in Figure 1. ERP and mental arithmetic tasks were developed using LabVIEW2016 (National Instruments Inc., Austin, TX, United States).
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3

Multichannel Cyclic Voltammetry Analysis

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M-CSWV was performed using a commercial electronic interface (NI USB-6363, National Instruments) with a base-station PC and software written in-house using LabVIEW 2016 (National Instruments, Austin, TX). Data, in the form of a sequence of unsigned 2-byte integers, were saved to the base-station computer and processed by MATLAB (MathWork Inc., Natick, MA). The processing includes temporal averaging, filtering, and simulating background currents. GraphPad Prism 5 (GraphPad Software, San Diego, CA) was used to generate figures and perform statistics (one-way, two-way ANOVA with multiple comparisons, etc.). All data are presented as mean ± standard error of the mean (SEM) values for n number of electrodes or rats.
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4

Multimodal Neurophysiological Recording

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LFP, electromyogram (EMG), and accelerometer (ACC) signals and video were monitored continuously from video-EEG device for offline processing. Intracranial electrode signals were fed through a high input impedance, DC-cut at 1 Hz, gain of 1000, 16-channel amplifier and digitized at 20 kHz (Xcell, Dipsi, Cancale, France) for half of the recordings and through a Blackrock Cereplex System using the Cereplex Direct Software Suite (version 7.0.6.0) developed by Blackrock Microsystems (Salt Lake City, UT, USA) for the second half, together with a synchronization signal from the ultrasound scanner. LFP signals were pre-amplified and digitized onto the animal’s head which prevent artifacts originating from cable movement. Custom-made software based on LabVIEW 2016 (National Instruments, Austin, TX, USA) simultaneously acquired video from a camera pointed at the recording stage. A regular amplifier was used, and no additional electronic circuit for artifact suppression was necessary. A large bandwidth amplifier was used, which can record local field potentials in all physiological bands (LFP, 0.1–2 kHz). The spatial resolution of LFPs ranges from 250 µm to a few mm radius.
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5

Operant Behavior Testing Platform for Neuroscience Research

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The operant behavior testing (OBT) components were obtained from Med Associates, Inc. (Fairfax, VT): nose poke (ENV-114AM), cue light (ENV-221M), tone generator (ENV-223AM), pellet dispenser (ENV-203) and pellet receptacle (ENV-200R2M). Lithium-Ion batteries (12 V, 10 Ah Model: CR12V10Ah with BMS protection circuit) were purchased from Dakota Lithium Battery (Seattle, WA). An MD-ROOC uses one battery at a time. A bidirectional digital I/O interface (NI 9401), wireless data acquisition unit (cDAQ 9191) and interface software (LabVIEW 2016) originated from National Instruments (Austin, TX). The wireless-LAN router (E1200 N300 Wi-Fi Router) was from Linksys (Irvine, CA). The battery delivers the power for all OBT and National Instruments components. A locally constructed digital interface contains an in-house built printed circuit board that accepts digital inputs to control MedAssociates components as well as receiving signals from the nose poke. (Supplementary Information Figures S.13).
Ordinarily, OBT componentsuse 28 V for both power and control signals. However, they can be configured, or modified, to use 12 V signals instead. Table 1 lists the modifications neccessary to allow the OBT components to be operated at 12 V.
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6

Biomechanical Analysis of Rowing Technique

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External kinetics were recorded on a bespoke instrumented ergometer with load cells at the handle, seat, and footplates and a rotary encoder on the flywheel (Murphy 2009 ; Buckeridge et al. 2012 (link)). Kinematic data was simultaneously recorded with a ten-camera optical motion tracking system, operating at 100 Hz (‘MX T-series’, Vicon, Oxford, Uk), and a four receiver ‘extended range’ EM tracking system operating at 75 Hz (‘Flock of Birds’, Ascension Technologies, VT, USA). The lab was arranged for a large capture volume (36 m3). The EM system transmitter was located 1 m to the right of the ergometer slide rail and 1.25 m above the floor on a wooden tower (Figure 1). OMC data was streamed to Vicon Nexus 1.8.5 software, while ergometer outputs and EM data were streamed to a custom data acquisition program (LabView 2016, National Instruments, TX, USA). Real-time feedback was displayed to athletes and researchers during testing (McGregor et al. 2016 (link)).

Diagram of OMC marker and EM receiver layout during rowing trials. Top-down view of sensors affixed to the instrumented ergometer (left). Anterior and posterior views of sensors as applied to subject anatomical landmarks (right). Relative position of key stroke occurrences (catch, mid-slide, release) is indicated to the left of the slide rail

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7

Spatial Delayed Alternation Task in Food-Restricted Rats

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Food restricted (85% of body weight) Long Evans rats (n = 9, Charles River Laboratories) were trained on a previously described spatial delayed alternation (SDA) task (Baker et al., 2019) (link), (Kidder et al., 2021) (link). Briefly, sessions were run on an elevated plus maze (black plexiglass arms, 58 cm long x 5.5 cm wide, elevated 80 cm from floor), with moveable arms and reward feeders controlled by custom LabView 2016 software (National Instruments, Austin, TX, USA). Each trial consisted of a rat leaving its starting location in a randomly chosen "north" or "south" arm, then navigating to an "east" or "west" arm for a 45 mg sucrose pellet reward (TestDiet, Richmond, IN, USA). Rewards were delivered when rats alternated from their previously chosen arm (i.e. if they selected the "east" arm on trial n -1 then they had to select the "west" arm for reward on trial n). After making a choice, rats had the opportunity for reward consumption (if correct) before they returned to the assigned start arm and entered into a 10 second delay period before the next trial began. Based on this structure, we divided the task into three epochs -choice, return, and delay.
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8

Meal Microstructure Analysis from Drinkometer

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During each ingestive session, the drinkometer recorded the change of the meal volume on the scale of time, using the LabVIEW 2016 software (National Instruments). At the end of the study, all recordings were pooled and processed into an in-house–built algorithm (44 (link)) in Matlab R2016b software (MathWorks) for noise filtering and identification of sucks, bursts (i.e., group of sucks), and intervals separating them (ISI and IBI). First, the optimal burst PC was visualized and identified by PDF and Gaussian mixture models fitted to the frequency histograms loge transformed ISI (49 (link)). Second, the identified PC was used to compute the microstructure of meal intake. Sucks can be visualized as complex waveforms representing the rate of fluid delivery into the mouth from the reservoir. Characteristics of the entire meal, as well as the number, size, duration, and rate of sucks, are PC independent, whereas the number, size, duration, rate of sucking bursts, and the lengths of within-meal pauses (ISI and IBI) are PC dependent.
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9

Measuring Jugular Vein Compression with Ultrasound and Force

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Ultrasound data is observed in real time and recorded on the EPIQ 7C Ultrasound System (Philips; Amsterdam, Netherlands). Force data is observed in real time and recorded with LabVIEW 2016 software (National Instruments; Austin, Texas, United States). Given a new orthostatic position of the subject, the orthogonal incidence angle of the force-coupled ultrasound probe with the long axis of the IJV is noted on the LabVIEW interface in terms of yaw and pitch. This angle of incidence is to be maintained throughout each compression in the given orthostatic position. When recording, three quick compressions are applied to IJV. Then, the user slowly and linearly ramps up force to slightly more than what is necessary for complete occlusion of the IJV. Then, one quick compression is applied. These steps are taken to provide recognizable artifacts in the ultrasound images and the force signal for synchronization later. When the Valsalva maneuver is performed by the subject, the only difference is that the subject does it during only the force sweep using the CR410 digital manometer (EHDIS Car Accessory Co. Ltd.; Guangdong, China) to read the airway pressure applied during the Valsalva.
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10

Elevated Cross-Maze Task for Rodents

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A black Plexiglas elevated cross-maze (79 cm from the floor, 58 × 5.5 cm maze arms) contained a 3D printed food well connected via tubing to a computer-controlled pellet delivery apparatus (Lafayette Instruments, Lafayette, IN, USA) which provided sucrose rewards (one 45 mg sucrose pellet; TestDiet, Richmond, IN, USA) at the ends of the two goal arms. The maze was controlled remotely with LabVIEW 2016 software (National Instruments, Austin, TX, USA). Each maze arm was hinged such that its proximal end (i.e., the segment closest to the maze center) could be raised and lowered by computer control. During the choice epoch, both goal arms were available; during the return epoch, only one start arm was available to guide the rat back to the start arm. A black curtain with visual cues attached surrounded the maze.
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