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4 protocols using peptidase

1

Stability and Enzymatic Effects on Bacteriocin A3

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The bacteriocin A3 was tested for stability in terms of inhibition on target microorganisms by varying its production in different carbon sources namely glucose, lactose and sucrose. This was repeated for thermal and pH stabilities. For accessing the thermal stability test, the bacteriocin was exposed to temperatures 40, 60, 80 and 100°C for 20 minutes. The heated bacteriocin was cooled to room temperature and tested for inhibition on Bacillus cereus. For the pH stability test, the bacteriocin was adjusted to a pH value ranging from 2 to 10 by using concentrated NaOH (Merck, Germany) and HCl (Merck, Germany). This was incubated for 2 hours at 25°C before determining the antimicrobial activity by agar well diffusion method. The vulnerability of the bacteriocin to breakdown by different enzymes namely proteinase K, lysozyme, lipase, catalase, lyticase, trypsin and peptidase sourced from Sigma- Aldrich was also tested and then checked for subsequent inhibition. 500 μl of the bacteriocin was treated with the enzymes with 1 mg/ml final concentration and a control without treatment was prepared. All preparations were incubated at 37°C for 1 hour before antimicrobial measurement with B. cereus.
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2

Semolina and Red Cod Biochemical Analysis

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Semolina (Sun Valley Foods, Christchurch, New Zealand) was obtained from Foodstuffs, New Zealand (Christchurch, New Zealand). Red cod (Pseudophycis bachus) fish were bought in ice condition from Christchurch Wholesale Seafood (Christchurch, New Zealand). Folin-Ciocalteau reagent, Fluorescein, 2,2′-azobis (2-amidino-propane) dihydrochloride (AAPH), 6-hydroxy-2,5,7,8-tetramethylchroman-2-carbixylic acid (Trolox), pepsin, pancreatin, trypsin, α-chymotrypsin, peptidase, Amyloglucosidase, and 3.5-dinitrosalicylic acid (DNSA) were purchased from Sigma-Aldrich (St. Louis, MO, USA).
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3

Metabolite Generation of 68Ga-Labeled Conjugates

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To generate artificial metabolites of the 68Ga-labelled trimeric conjugates the radiolabelling solution was neutralized with sodium carbonate solution (Na2CO3, 1 M), diluted with PBS to a final concentration of 4.4 μM and after adding 10 mU of peptidase (protease type 1 from bovine pancreas, Sigma Aldrich, Vienna, Austria) the mixture was maintained at 37°C. Samples (25 μL) were taken at different time points (5, 10, 60 and 120 min), 0.1% TFA/methanol (1:1) was added to quench the enzymatic reaction followed by subsequent radio-RP-HPLC analysis.
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4

In Vitro Protein Digestibility of Porcine Splenic Hydrolysate

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The in vitro protein digestibility of the porcine splenic hydrolysate and the casein was evaluated by the pH-shift method using the multi-enzyme technique (AOAC, 1990 ). Based on Kjeldahl nitrogen at a concentration of 1 mg/ mL in distilled water each sample was adjusted to pH 8.0 at 37℃ in a water bath. Then a multi-enzyme mixture, freshly prepared using trypsin, α-chymotrypsin, and peptidase (all from Sigma-Aldrich), was added to the solution for 10 min at 37℃ followed by bacterial protease (Sigma-Aldrich, USA) at 55℃ for 9 min. Following this the temperature was changed back to 37℃ for 1 min. Finally the reduction in pH of the sample from pH 8.0 was monitored after 20 min of incubation. The protein digestibility was calculated as follows:
% Digestibility = 234.84 – 22.56 (X),
where X = pH reduction at 20 min.
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