The largest database of trusted experimental protocols

Abi 7500 ht real time pcr machine

Manufactured by Thermo Fisher Scientific
Sourced in United States

The ABI 7500 HT Real-Time PCR machine is a laboratory instrument designed for quantitative real-time polymerase chain reaction (qRT-PCR) analysis. It is capable of conducting real-time PCR reactions and measuring the amplification of DNA or RNA samples in a high-throughput manner.

Automatically generated - may contain errors

3 protocols using abi 7500 ht real time pcr machine

1

Quantifying Gene Expression in Granulosa Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total RNA was extracted from GCs with Trizol reagent (Invitrogen Co., Carlsbad, CA, United States) according to the manufacturer’s instruction. The cDNA was synthesized using the RevertAid First Strand cDNA Synthesis Kit (Thermo Fisher Scientific, San Jose, CA, United States) following the manufacturer’s instruction. The reverse transcription product was diluted at 1:10 and then used as a cDNA template for RT-qPCR analysis. Relative expression of the target genes was determined by RT-qPCR that was carried out on ABI 7500 HT Real-Time PCR machine (Applied Biosystems, Foster City, CA, United States) in a 10 µL volume using AceQ Universal SYBR qPCR Master Mix (Vazyme., Nanjing, China). Sequences of the primers were provided in Table 1. All samples were normalized with the average of β-actin and GAPDH using the comparative cycle threshold method [2−(△) (△) Ct).
+ Open protocol
+ Expand
2

Quantitative Gene Expression Analysis of Follicular Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total RNA was extracted from follicles using a Trizol reagent (Vazyme, Nanjing, China). RNA concentrations were measured using a NanoDrop 2000c (Thermo Scientific, Waltham, USA). The cDNA was generated from 2 μg total RNA using a HiScript II 1st Strand cDNA Synthesis Kit (Vazyme, Nanjing, China) according to the manufacturer's protocol. qPCR was performed in triplicate using a SYBR Premix Ex TaqTM (Vazyme, Nanjing) in ABI 7500 HT Real-Time PCR machine (Applied Biosystems, Foster City, CA, USA). The qPCR conditions were as follows: 95°C for 10 min and then 40 cycles of 95°C for 30 s, 64°C for 34 s, and 72°C for 30 s. The 2−ΔΔCt formula method was used to analyze relative mRNA expression calibrated with β-actin as the reference gene. Primers were listed in Table 2.

Sequences of the primers for PCR.

Gene nameAccession no.Primer sequence (5′-3′)Product size (bp)
CCND1NM_205,381.1F: CCTCAAGAAAAGCCGGTTGC86
R: CTGCGGTCAGAGGAATCGTT
CDK2NM_0,011,99857.1F: TCCGTATCTTCCGCACGTTG183
R: GCTTGTTGGGATCGTAGTGC
Caspase-3NM_204,725.1F: CAGCTGAAGGCTCCTGGTTT98
R: GCCACTCTGCGATTTACACG
VEGFANM_0,011,10355.1F: GTCGTACATATTCAGGCCATC197
R: GATTCTTTGGTCTGCAGTCAC
NOS3JQ434761.1F: GAACCCCCAAGACCTACGTGC180
R: CCTGCCCCATGGTCATTCCTC
β-actinNM_205,518F: ACACCCACACCCCTGTGATGAA136
R: TGCTGCTGACACCTTCACCATTC
+ Open protocol
+ Expand
3

Quantitative Expression Analysis of Cathepsin and Cystatin

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total RNA was extracted using TRIzol® reagent (Sigma-Aldrich; Merck KGaA). cDNA was synthesized from 2 µg total RNA using ReverTra Ace® qPCR Reverse Transcriptase kit (cat. no. FSQ-101; Toyobo Co., Ltd., Osaka, Japan) according to the manufacturer's protocol. qPCR was performed using the SYBR-Green Master mix (cat. no. QPK-212; Toyobo Co., Ltd.) in an ABI 7500HT Real-Time PCR machine (Applied Biosystems; Thermo Fisher Scientific, Inc.). The thermocycling conditions for PCR were 95°C for 60 sec, followed by 40 cycles at 95°C for 15 sec, 61°C for 15 sec and 72°C for 45 sec. The relative expression level was determined by the 2−∆∆Cq method and normalized against GAPDH (15 (link)). The primer sequences used were as follows: Forward, 5′-CGAATCATTGAAGATCCGAGTG-3′ and reverse, 5′-ATGGCTTAGAGCCCAATTATGT-3′ for cathepsin L; forward, 5-TAT TGC CTG ATT CTG TGG ACT G-3 and reverse, 5-TGA TGT ACTG GAA AGC CGT TGT-3 for cathepsin S; forward, 5′-GCAGATCGTAGCTGGGGTGAACT-3′ and reverse, 5′-AAGCAAGAAGGAAGGAGGGAGGG-3′ for cystatin C; and forward, 5′-TGCACCACCAACTGCTTAGC-3′ and reverse, 5′-GGCATGGACTGTGGTCATGAG-3′ for GAPDH.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!