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5 bromo 4 chloro 3 indolyl phosphate 4 nitroblue tetrazolium bcip nbt substrate solution

Manufactured by Roche

BCIP/NBT substrate solution is a colorimetric detection reagent commonly used in immunochemical and molecular biology techniques. It contains 5-bromo-4-chloro-3-indolyl-phosphate (BCIP) and 4-nitro-blue tetrazolium (NBT) as the main components. This solution is designed to produce a dark-colored insoluble precipitate upon reaction with alkaline phosphatase-conjugated detection systems.

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2 protocols using 5 bromo 4 chloro 3 indolyl phosphate 4 nitroblue tetrazolium bcip nbt substrate solution

1

In situ Hybridization Localization of Sik1 and Sik2

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In situ hybridization was performed as previously described with some modifications48 (link). Fragments of the coding regions for Sik1 and Sik2 0.7–0.8 kb in length were generated by PCR using mouse brain and BAT cDNA as templates, respectively. The primers used were Sik1-Fw (5′-ATAGA CTGTG ATCTC CACAG CTCAC TT-3′), Sik1-Rv (5′-ACAGG GAGCA AGCAC ATAGG-3′), Sik2-Fw (5′-AACCC CTCCC TTGAG AGTGT-3′) and Sik2-Rv (5′-GGAAG AGTCG CTTCT GTTGG-3′). Sik1 and Sik2 cDNAs were inserted into pGEM-T easy (Promega) and used for digoxigenin (DIG)-labeled probe synthesis. Mice were perfused with PBS followed by 4% paraformaldehyde (PFA), and harvested brains were postfixed in 4% PFA overnight. Forty μm-thick brain sections were treated with 0.3% Triton X-100, digested with 1 μg/ml proteinase K, treated with 0.75% glycine, and then treated with 0.25% acetic anhydride in 0.1 M triethanolamine. After overnight incubation with a DIG-labeled probe at 60 °C, the sections were washed and then incubated with alkaline phosphatase-conjugated anti-DIG Fab fragments (Roche). The reactions were visualized with a 5-bromo-4-chloro-3-indolyl-phosphate/4-nitroblue tetrazolium (BCIP/NBT) substrate solution (Roche). Sik2-deficient mouse brains were used as negative controls39 (link).
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2

In Situ Hybridization of Nalcn in Mouse Brain

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In situ hybridization was performed as described previously36 (link). In brief, a 0.7-0.8 kb fragment of Nalcn cDNA was inserted into pGEM-T easy (Promega) and used for DIG-labeled probe synthesis. Mice were deeply anesthetized with sodium pentobarbital and perfused transcardially with PBS followed by 4% paraformaldehyde (PFA). Forty μm-thick brain sections were treated with 0.3% Triton X-100, digested with 1 μg/ml proteinase K, treated with 0.75% glycine, and then treated with 0.25% acetic anhydride in 0.1 M triethanolamine. After overnight incubation with DIG-labeled probe at 60 °C, the sections were washed and then incubated with alkaline phosphatase-conjugated anti-DIG Fab fragments (Roche, 11175041910). The reactions were visualized with a 5-bromo-4-chloro-3-indolyl-phosphate/4-nitroblue tetrazolium (BCIP/ NBT) substrate solution (Roche).
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