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10 protocols using vw h2ma

1

Time-lapse Imaging of Gastric Organoids

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Time-lapse imaging of gastric organoids was performed using a BZ-X710 All-in-one fluorescence microscope equipped with a CO 2-and temperature-controlled chamber and a time-lapse tracking system (KEYENCE). Z stack images of bright field and crimson fluorescence were captured every 30 m for each sample using BZ-X Viewer software (KEYENCE), then converted into movie files using BZ-X Analyzer software (KEYENCE). Cytoplasmic crimson fluorescence was excited at 620/60 nm and collected using a 700/75-nm bandpass filter (KEYENCE). The movies for each analyzed field were used to analyze cell migration via the video editing analysis software VW-H2MA (KEY-ENCE). Each individual cell was traced throughout the imaging period. The tracking data were subsequently processed with Excel 2016 (Microsoft, Redmond, WA) to create XY coordinate plots and to calculate distance measurements.
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2

Motility Patterns of L. agilis Strains

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The swimming behavior of the WT and non-chemotactic (ΔcheA) L. agilis strains at the exponential phase was observed. Individual motile cells (n = 10) were tracked for 10 s (15 frames per second) under a BZ-X710 microscope (10 × objective; Keyence, Osaka, Japan) using video editing analysis software VW-H2MA (Keyence, Osaka, Japan). All coordinates (x,y) of the starting point of each track were set to (0,0).
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3

Bacterial Swimming Behavior Imaging

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Bacterial suspensions were plated on microscope slides. The slides were imaged using KEYENCE BZ-X700 (Keyence, Osaka, Japan). The movies were then analyzed for bacterial swimming behavior using the video editing analysis software VW-H2 MA (Keyence, Osaka, Japan). Tracking data were subsequently processed using Microsoft Excel 2013 (Microsoft, Tokyo, Japan) to create x-y coordinate plots.
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4

Real-Time Esophageal Cancer Cell Imaging

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Real‐time imaging of esophageal cancer cells was undertaken in 6‐well plates coated with 200 μL Corning Matrigel Matrix (Corning) diluted 2‐fold with culture medium. The siRNA‐transfected/BAPN‐treated cells were seeded on Matrigel‐coated 6‐well plates at 5 × 104 cells/well. After a 24‐hour incubation at 37°C in 5% CO2, the cells were imaged using a Keyence BZ‐X700 all‐in‐one fluorescence microscope equipped with a CO2‐ and temperature‐controlled chamber and a time‐lapse tracking system. Images were captured every 10 minutes for 24 hours using BZ‐X Viewer software (Keyence) and were then converted into movie files using BZ‐X Analyzer software (Keyence). Cell migration was analyzed from movies using the video editing analysis software VW‐H2MA (Keyence). The tracking data were subsequently processed with Excel (Microsoft) to create X‐Y coordinate plots and velocity and distance measurements.
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5

Imaging and Analyzing Mitochondria in sIBM Cells

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To obtain images of mitochondria, cells from sIBM patients were stained with MitoTracker red (a molecular probe, shown in red), and the nuclei were counterstained with 4',6-diamidino-2-phenylindole (DAPI, shown in blue). The samples were then placed into a confocal microscopy system (Nikon, Tokyo, Japan). Images were acquired and analyzed using NIS-Elements with N-SIM analysis software (Nikon) and ImageJ. Briefly, the MitoTracker red signal in the images was changed to grayscale, and a suitable threshold level that allowed the signal intensity of the mitochondria to be distinguished from the background noise was set in ImageJ software. The lengths of the major and minor axes of the mitochondria were measured using ImageJ. Electron microscopy analysis was performed as previously reported [12 (link), 16 (link)]. For live-cell imaging, culture dishes with myoblasts and fibroblasts from sIBM patients stained with MitoTracker Green were placed into a KEYENCE BZ-X700 All-in-one Fluorescence Microscope (KEYENCE, Osaka, Japan). Images were taken for 5 min and converted to movie files using a BZ-X Analyzer (KEYENCE). The movies were analyzed with the video editing analysis software VW-H2MA (KEYENCE) to evaluate cell migration [17 (link)].
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6

Time-Lapse Imaging of Cell Migration

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Six‐well plates were imaged with a Keyence BZ‐X700 All‐in‐one Fluorescence Microscope equipped with a CO2‐ and temperature‐controlled chamber and time‐lapse tracking system (Keyence). Images were taken every 5 minutes for 24 hours and converted to movie files using a BZ‐X Analyzer (Keyence). The movies were analyzed for cell migration with the video editing analysis software VW‐H2MA (Keyence). We tracked 10 cells/well and the tracking data were subsequently processed with Microsoft Excel 2010 to create xy coordinate plots and distance measurements.
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7

Contractility Evaluation of Biohybrid Robots

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To investigate contractility of the skeletal muscle tissue formed on the flexible substrate, we applied alternative-current (AC) square waves as electrical stimulations, generated using a function generator (Agilent Technologies Inc.) and an amplifier (Mess-Tek Co., Ltd.), to the skeletal muscle tissue via gold electrodes placed in the culture medium. To measure the moving distance of the tip of the flexible substrate, we observed the tip using a microscope (IX71N; Olympus) and quantified the movements of the tip using a motion analyzer (VW-H2MA; Keyence Corp.).
To evaluate the motions of the biohybrid robot in air, we placed it in air by immobilizing wires on a fixed base. In this state, we applied AC square waves to the skeletal muscle tissue via gold electrodes patterned on the flexible substrate. To estimate the moving distance of the reference point, we observed the point using the digital camera with a macro lens and quantified the movements of the tip using the motion analyzer.
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8

Imaging and Analyzing GC Cell Migration

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We performed real-time imaging of GC cells in 6-well plates. Each well was coated with 200 μl of BD Matrigel (BD Biosciences, California, USA). NUGC3/C5aR cells were plated and allowed to adhere for 12 hours. The 6-well plates were imaged with a KEYENCE BZ-X700 all-in-one fluorescence microscope equipped with a CO2 and temperature controlled chamber and time-lapse tracking system (KEYENCE, Osaka, Japan). Phase contrast images were taken every 10 minutes for 24 hours and converted to movie files using a BZ-X Analyzer (KEYENCE). We analyzed the movies for cell migration with the video editing analysis software VW-H2MA (KEYENCE) and subsequently processed the tracking data with Microsoft Excel 2010 (Microsoft, Redmond, WA) to create xy coordinate plots and distance measurements.
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9

Cell Migration Assay using Matrigel

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Migration was measured using 6-well plates coated with 200 µl/well Matrigel® (BD Biosciences). LoVo and SW480 cells were resuspended at a concentration of 4.0×104 cells/ml in each medium, plated at 200 µl/well and allowed to adhere for 12 h. The plates were then imaged with a KEYENCE BZ-X700 all-in-one fluorescence microscope equipped with a CO2 and temperature-controlled chamber and time-lapse tracking system (Keyence Corporation). Phase contrast images were acquired every 10 min for 24 h and converted to video files using a BZ-X Analyzer (Keyence Corporation). Cell migration was analyzed using video editing analysis software VW-H2MA (Keyence Corporation) and the tracking data were processed using Excel 2010 (Microsoft Corporation) to generate xy coordinate plots and allow measurement of the distance moved. Migration distance was calculated by randomly selecting three cells in each well, tracking their movement for 15 sec and plotting the average value (n=3) of the distances moved on a graph.
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10

Mitochondrial Imaging in sIBM Cells

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To obtain images of mitochondria, cells from sIBM patients were stained with MitoTracker red (a molecular probe, shown in red), and the nuclei were counterstained with 4',6-diamidino-2-phenylindole (DAPI, shown in blue). The samples were then placed into a confocal microscopy system (Nikon, Tokyo, Japan). Images were acquired and analyzed using NIS-Elements with N-SIM analysis software (Nikon) and ImageJ.
Briefly, the MitoTracker red signal in the images was changed to grayscale, and a suitable threshold level that allowed the signal intensity of the mitochondria to be distinguished from the background noise was set in ImageJ software. The lengths of the major and minor axes of the mitochondria were measured using ImageJ. Electron microscopy analysis was performed as previously reported [12, 16] . For live-cell imaging, culture dishes with myoblasts and fibroblasts from sIBM patients stained with MitoTracker Green were placed into a KEYENCE BZ-X700 All-in-one Fluorescence Microscope (KEYENCE, Osaka, Japan). Images were taken for 5 min and converted to movie files using a BZ-X Analyzer (KEYENCE). The movies were analyzed with the video editing analysis software VW-H2MA (KEYENCE) to evaluate cell migration [17] .
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