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53 protocols using ab15098

1

Histological Analysis of Nerve Conduits

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The nerve conduits were harvested and fixed in 4% PFA at 4 °C for 2 h. After being washed with PBS, the tissues were cryoprotected with 30% sucrose in PBS at 4 °C overnight, and were then embedded in optimum cutting temperature compound, followed by being frozen at − 80 °C. The frozen samples were cryosectioned longitudinally and transversely at − 20 °C for the thickness of 10 μm. The slices were placed onto Superfrost plus slides and stored at − 20 °C. IHC staining was performed for histological analysis. The slices were permeabilized with 0.5% Triton X-100 in PBS for 30 min, blocked with 4% normal goat serum in PBS for 1 h, and then incubated overnight at 4 °C with primary antibodies. The slides were then washed with PBS and incubated with secondary antibodies for 1 h at room temperature. After further PBS washing, the coverslips were mounted and viewed with a fluorescent microscope (Zeiss). The primary antibodies used for IHC analysis in this study were as follows: neural filament-medium polypeptide (NFM) (ab7794, Abcam), S100β (ab4066, Abcam), Claudin-1 (ab15098, Abcam), CD31 (ab28364, Abcam), ⍺-SMA (ab5694, Abcam), and CNN1 (ab233854, Abcam). Fluorescence-tagged anti-mouse and anti-rabbit secondary antibodies (Abcam) were used.
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2

Tight Junction Protein Analysis

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Western blotting of ileum and colon were performed as previously described61 (link). The primary antibodies against claudin 1 (1:1000 dilution, ab15098), occludin (1:1000 dilution, ab31721), and ZO-1 (1:1000 dilution, abG041) were purchased from Abcam.
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3

Western Blotting Analysis of Inflammatory and Antioxidant Markers

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The following primary antibodies were employed (dilution): ZO1 (1:1000, ab96587, Abcam, USA), occludin (1:1000, ab167161, Abcam, USA), claudin-1 (1:1000, ab15098, Abcam, USA), IκBα (1:2000, 4812, Cell Signaling Technology, USA), p-IκBα (1:2000, 2859, Cell Signaling Technology, USA), NF-κB p65 (1:1000, ab16502, Abcam, USA), monocyte chemotactic protein-1 (MCP-1, 1:1000, ab7202; Abcam, USA), cyclooxygenase-2 (COX-2, 1:1000, ab62331; Abcam, USA), Keap1 (1:1000, ab139729, Abcam, USA), Nrf2 (1:1000, ab31163, Abcam, USA), heme oxygenase 1 (HO-1, 1:2000, ab68477, Abcam, USA), catalase (1:1000, ab52477, Abcam, USA), NAD(P)H quinone dehydrogenase 1 (NQO1, 1:1000, ab28947, Abcam, USA), α smooth muscle actin (α-SMA, 1:300, ab7817, Abcam, USA), collagen I (1:5000, ab34710, Abcam, USA), and fibronectin (1:1000, ab2413, Abcam, USA). Western blot analysis was performed as previously described24 (link),26 (link),27 (link). Blots were obtained with ECL reagent and protein concentrations were normalized by actin expression. Specific bands indicating target proteins were analyzed using ImageJ 1.48 v software.
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4

Immunofluorescence imaging of endothelial cells

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Cells cultured in the FEPM devices were fixed with 4% paraformaldehyde (PFA, Nacalai Tesque, Kyoto, Japan) for 20 min, washed with PBS, and permeabilized with 0.1% Triton X-100 (Sigma-Aldrich, St. Louis, USA) for 15 min. The cells were then incubated with blocking buffer containing 1% bovine serum albumin (BSA, Sigma-Aldrich) for 30 min at room temperature and incubated with antibodies directed against vascular endothelial (VE)-cadherin (Abcam, ab33168, dilution 1:200, Cambridge, UK) or Claudin (Abcam, ab15098, dilution 1:200) overnight at 4 °C, followed by PBS washes. Subsequently, Alexa 568-conjugated secondary antibody (Abcam, ab175471, dilution 1:500) was introduced into the channels and incubated for 1 h at room temperature. The cells were co-stained with 4’,6-diamidino-2-phenylindole (DAPI, Invitrogen, D1306, Waltham, USA). Cross-sectional images were obtained at 2 µm intervals in the vertical direction using a confocal microscopy (FluoView FV1000 confocal, Olympus, Tokyo, Japan) with the 10× objective.
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5

Sertoli Cell CLDN1 Expression Dynamics

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Sertoli cells were treated with 50 ng IFN-γ at 32°C for 0, 24 and 48 h, respectively. Cells were collected at different time point and then fixed with 4% PFA. After washed with PBS, cells were incubated with rabbit anti-mouse CLDN1 (1:200, Abcam, ab15098) polyclonal antibody at 4°C overnight. Donkey anti-rabbit IgG (1:1000, Alexa Fluor R 594, Life technologies, USA, A21207) served as secondary antibody. Images were captured with Olympus microscope (IX71, Olympus, Japan).
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6

Immunofluorescent Detection of Tight Junction Protein

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Samples of distal ileum were fixed with 4% paraformaldehyde. Sections then were cut and mounted on microscope slides. After deparaffinization and antigen retrieval (Antigen Retrieval reagent; R&D Systems, Minneapolis, MN, USA), tissue sections were immersed in PBS/0.1 tween for 10 min and were blocked by Normal Goat Serum. They were then incubated with primary antibody rabbit polyclonal anti-claudin-1 [ab15098; RRID: AB_301644; final concentration, 1:100; Abcam, Cambridge, MA, USA (27 (link))] overnight in a humid chamber at 4°C. The sections were washed three times with PBS, and secondary antibody goat anti-rabbit [ab150077; RRID: AB_2630356; final concentration: 1:500; (28 (link))] and DAPI (both Abcam, Cambridge, MA, USA) were added. This was followed by a 1-h incubation at room temperature. The sections were washed three times with PBS, dried and mounted and images were collected using a confocal fluorescent microscope (magnification, ×400) (Nikon A1; Nikon Corp., Tokyo, Japan).
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7

Immunohistochemical Staining of Claudin-1 in TSCC

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For immunohistochemical staining, formalin‐fixed, paraffin‐embedded human TSCC tissue sections were used. Primary antibody was anti‐claudin‐1, rabbit polyclonal, 1:100 (ab15098; Abcam). Antigen retrieval was carried out according to the manufacturer’s protocol. EnVision + Dual Link (Dako) was used as the secondary antibody, and coloration was conducted with the diaminobenzidine substrate.
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8

Western Blot Analysis of Tight Junction Proteins

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Total protein was isolated from colon tissues using radioimmunoprecipitation assay (RIPA) buffer (Beyotime Biotechnology, Shanghai, China) and protein concentration was measured using a bicinchoninic acid (BCA)-protein quantification kit (Beyotime Biotechnology). Equal amounts of total proteins (approximately 50 µg) were subjected to a 12% sodium dodecyl sulphate-polyacrylamide gel electrophoresis (SDS-PAGE) to separate total proteins and then transferred onto polyvinylidene difluoride (PVDF) membranes (Thermo Fisher Scientific). Membranes were blocked using 3% bovine serum albumin (BSA) at room temperature (RT) for 60 minutes and then treated with the indicated primary antibody against ZO-1 (1:800, ab216880; Abcam, Cambridge, MA, USA), CLDN1 (1:2,000, ab15098, Abcam), and β-actin (1:6,500, ab6276, Abcam) for 60 minutes at RT. The membranes were washed 5 times with tris-buffered saline with Tween (TBST) and then incubated with the secondary antibody (1:10,000, G-21040, Thermo Fisher Scientific) at RT for 60 minutes. The immunoblots were visualized using chemiluminescence detection.
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9

Immunohistochemical Analysis of Colon Tissue

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Colon sections were incubated with rabbit anti-mouse antibody against Ki67 (ab66155, 1: 500; Abcam), or claudin-1 (ab15098, 1: 500; Abcam) at 4°C overnight. The sections were then incubated with goat anti-rabbit secondary antibody (1: 1000, Beijing Zhongshan Biotechnology, Beijing, China) at 37°C for 30 min and were finally stained with HE and examined for staining density.
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10

Evaluation of Tight Junction Proteins

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Expressions of Claudin-1 and ZO-1 were evaluated with immunofluorescence staining. Briefly, mouse colon tissue was fixed in 4% paraformaldehyde for 24 h, dehydrated using 30% sucrose, embedded in frozen section embedding agent and sliced (10-microns thick), permeabilized using 0.3% triton X-100 for 10 min, and blocked with 10% BSA for 60 min. The following primary antibodies was used: Claudin-1 (1:100, Abcam #ab15098), ZO-1 (1:200, Abcam #ab96587). The tissue sections were then incubated with the appropriate Anti-rabbit IgG (H+L) or F(ab')2 Fragment (Alexa Fluor® 488 Conjugate) (1:1000, CST#4412). Nuclei were stained with DAPI. The immunofluorescence quantification was analyzed by image J. Each experiment was repeated three times.
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