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Tryptose phosphate broth

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Tryptose phosphate broth is a microbiological culture medium used for the cultivation and enumeration of various microorganisms, including bacteria and yeasts. It provides essential nutrients and growth factors required for the proliferation of a wide range of microbial species.

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121 protocols using tryptose phosphate broth

1

Culturing Chicken Embryo Fibroblasts and Lymphoma Cell Lines

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CEF used in this study were prepared from 10-day old Valo SPF embryos. Cells were cultured in M199 medium (Thermo Fisher Scientific, Paisley, Scotland, UK) supplemented with 5% fetal bovine serum (FBS, Sigma, St. Louis, MO, USA), 100 units/mL of penicillin and streptomycin (Thermo Fisher Scientific), 0.25 µg/mL Fungizone (Sigma), 7.5% sodium bicarbonate, and 10% tryptose phosphate broth (Sigma). The MDV-transformed LCLs MSB-1 [40 (link)] from a spleen lymphoma induced by the BC-1 strain of MDV and HP8 [41 (link)] from a GA strain-induced tumor were grown at 38.5 °C in 5% CO2 in RPMI 1640 medium (Thermo Fisher Scientific) containing 10% fetal bovine serum, 10% tryptose phosphate broth, 1% sodium pyruvate solution (Sigma), and 100 units/mL of penicillin and streptomycin.
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2

Lymphoma Cell Culture Protocols

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The MDCC-MSB1 cell line, a Marek’s disease lymphoma-derived chicken cell line, was cultured at 38.5 °C in 5% CO2 in RPMI 1640 medium (Gibco, USA) containing 10% fetal calf serum (Gibco, Australia) and 10% tryptose phosphate broth (Sigma-Aldrich, USA). Avian leukosis virus (ALV) lymphoma-derived chicken cell line DT40 was cultured at 38.5 °C in 5% CO2 in RPMI 1640 medium (Gibco, USA) containing 10% fetal calf serum (Gibco, Australia), 5% chicken serum (Gibco, USA) and 5% tryptose phosphate broth (Sigma-Aldrich, USA). Poly (I:C) was obtained from Sigma-Aldrich (USA). The pan-caspase inhibitor Z-VAD-FMK was purchase from Beyotime Biotechnology (Nantong, China). The inhibitors Pepinh-TRIF, resveratrol, BX795, and 2-aminopurine were purchase from InvivoGen (USA). Necrostatin-1 and BAY11-7082 was purchased from Abcam (USA).
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3

Dengue Virus Serotype 2 Propagation

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Mock and DENV serotype 2 (strain 16681) stocks were grown on C6/36 cells in Leibovitz’s L-15 medium (Thermo Fisher Scientific, cat #21083027) supplemented with 10% heat-inactivated fetal bovine serum (FBS) (Sigma-Aldrich, cat #F7524), 2% tryptose phosphate broth (Sigma-Aldrich, cat #T8159), 1× minimum essential media (MEM) non-essential amino acids (Thermo Fisher Scientific, cat #11140035) and 50 U/mL penicillin and 50 µg/mL streptomycin (Thermo Fisher Scientific, cat #15070063) at 28°C without CO2. Six days after infection the culture medium was harvested, centrifuged for 5 min at 400g and filtered through an 0.2 μm filter (VWR, cat # 514-0061). Viral titers were measured by end-point dilution on Baby Hamster Kidney 15 (BHK-15) cells, using 10-fold dilutions in 96-well plates and scoring for cytopathic effect (CPE) at 7 days post-infection. BHK-15 cells were cultured in Dulbecco’s Modified Eagle Medium (DMEM), high glucose (Thermo Fisher Scientific, cat #11965092) supplemented with 10% heat-inactivated FBS and 50 U/mL penicillin and 50 µg/mL streptomycin.
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4

Cell Culture Protocols for Diverse Cell Lines

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The Madin Darby canine kidney (MDCK), human embryonic kidney (HEK) 293T, chicken DF-1 and adenocarcinomic human alveolar basal epithelial cells (A549) (obtained from the Central Services Unit at TPI) were maintained in Dulbecco’s modified Eagle’s medium (DMEM) (Sigma), supplemented with 10% fetal bovine serum (FBS) (Life Science Production) and 1× penicillin-streptomycin (Gibco). Primary chicken kidney (CK) cells were prepared as previously described (97 (link)) and were maintained in Eagle’s minimum essential medium (EMEM) (Sigma) containing 7% bovine serum albumin (BSA) (Sigma), 1× penicillin-streptomycin (Gibco), and tryptose phosphate broth (Sigma). All cell lines and primary cells were maintained at 37°C and 5% CO2.
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5

Culturing Mosquito-Derived C6/36 (wAlbB) Cell Line

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The C6/36 (wAlbB) cell line used in this screen has been
described previously.2 (link),7 (link),20 (link)23 (no link found, link, link) In brief this mosquito
(Aedes albopictus)-derived cell line is stably infected
with Wolbachia pipientis (wAlbB). For use in
the screen, cells were cultured in Leibovitz medium (Life Technologies,
Loughborough, UK) supplemented with 20% fetal bovine serum (FBS; Fisher
Scientific, Loughborough, UK), 2% tryptose phosphate broth (Sigma-Aldrich,
Poole, UK), 1% nonessential amino acids (Sigma-Aldrich), and 1%
penicillin-streptomycin (Sigma-Aldrich) at 26 °C, without additional
CO2. The medium described was optimized through previous work.20 (link)
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6

Tick Cell Line Maintenance Protocol

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Ixodes ricinus-derived tick cell lines IRE11 [17 (link)], IRE/CTVM19 and IRE/CTVM20 [4 (link)], and I. scapularis-derived tick cell lines ISE6 [18 (link)] and ISE18 [19 (link)], were maintained in L15 medium supplemented with 20% bovine fetal serum, antibiotic/antimycotic mix (all Biosera, Nuaille, France) and 10% tryptose phosphate broth (Sigma-Aldrich) in 10 ml flat sided cell culture tubes (Nunc, Rochester, USA) in a cell incubator at 28 °C as described in [20 (link)]. Confluent tick cell cultures were harvested by pipetting into sterile 2 ml microtubes and spun at 600× g for 5 min at room temperature. The supernatant was removed and cells were resuspended in phosphate-buffered saline, pH 7.4 (PBS) and spun at 600× g for 5 min. The PBS washing step was repeated two more times. Upon supernatant removal, the cell pellets were stored at − 80 °C until further use.
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7

Aedes Cell Lines for Dengue Studies

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Two Aedes spp. cell lines were used in this study, Aag2 and C6/36 cells. The Ae. aegypti cell line, Aag2 (ATCC, VA), was used for in vitro studies. Aag2 cells were grown at 28 °C with 5% CO2 in Schneider’s Drosophila Medium for transfection studies and DMEM high glucose media for the remaining studies. Both types of media were supplemented with 10% heat-inactivated fetal bovine serum (Gemini, CA), 1% penicillin-streptomycin, and 1% tryptose phosphate broth (Sigma, MO). Lipid-depleted serum was made by incubating serum with fumed silica overnight followed by removal of silica-lipid complexes by centrifugation26 (link). Lipid-depleted serum was added to cell culture components to make lipid-depleted media. In addition, the Ae. albopictus cell line, C6/36 (obtained from Erol Fikrig), was used to grow DENV stocks using the same media. The dengue strain used was DENV-2 New Guinea C. C6/36 cells were infected at an MOI of 1.0 virus stock was stored at −80 °C until use.
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8

Ae. aegypti Cell Line Dengue Virus Propagation

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The Aag2 Ae. aegypti cell line was used for transfection and infection studies. The cells were grown at 30°C and 5% CO2 in DMEM supplemented with 10% heat-inactivated fetal bovine serum (Gemini, CA), 1% penicillin-streptomycin and 1% tryptose phosphate broth (Sigma, MO). Dengue virus stock was grown in C6/36 Ae. albopictus cell line using the same media. The dengue strain used was DENV-2 New Guinea C. Cells were infected at an m.o.i. of 1.0, virus was allowed to propagate for 6–8 days, supernatant was removed, spun down and virus stock was stored at −80°C until use.
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9

Culturing Aedes Cell Lines for Research

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Cells of the C6/36 (ATCC CRL-1660) and U4.4 cell lines (A. albopictus) (26 (link)) and the Aag2 cell line (A. aegypti) (48 (link)) (kindly provided by G. P. Pijlman, Wageningen University, the Netherlands) were maintained at 28°C in L-15 Leibovitz medium (Gibco) supplemented with 10% fetal bovine serum (FBS; Gibco), 1% nonessential amino acids (Gibco), 2% tryptose phosphate broth (Sigma), and 1% penicillin-streptomycin (Gibco).
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10

Porcine Epidemic Diarrhea Virus Infection and Challenge

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The wild-type PC22A strain of PEDV was used for gilt infection and piglet challenge at a dose of 1 × 105 plaque forming units diluted in Minimal Essential Media [MEM (Life Technologies, Carlsbad, CA, USA)]. Briefly, PC22A was isolated and cultured in Vero cells as described previously [32 (link), 33 (link)]. Cells were grown in growth medium containing Dulbecco’s Modified Eagle’s Medium [DMEM (Life Technologies, Carlsbad, CA, USA)] supplemented with 5% fetal bovine serum (Life Technologies, Carlsbad, CA, USA) and 1% antibiotic–antimycotic (Life Technologies, Carlsbad, CA, USA). Virus was grown in Vero cells in maintenance medium containing DMEM supplemented with 10 μg/mL trypsin (Life Technologies, Carlsbad, CA), 0.3% tryptose phosphate broth (Sigma Aldrich, St. Louis, MO, USA), and 1% antibiotic–antimycotic. Cells were kept in a humidified incubator at 37 °C and 5% CO2. PC22A was passaged three times in Vero cells before passaging once for generation of inoculum in a gnotobiotic pig. The virulence of pig passaged PC22A was confirmed in adult and neonatal pigs as described previously [13 (link), 34 (link), 35 (link)]. Cell-culture adapted PC22A was used as a positive control in the virus neutralization (VN) Ab assay.
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